RNA–Protein interactions for RNA: ENST00000551352.1

SMARCD1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-210ENST00000551352 TRIM52Q96A61 297 aa10.76□□□□□ -0.69
SMARCD1-210ENST00000551352 ORAI2Q96SN7 254 aa10.76□□□□□ -0.69
SMARCD1-210ENST00000551352 ADGRF5Q8IZF2 1346 aa10.76□□□□□ -0.69
SMARCD1-210ENST00000551352 TECPR2O15040 1411 aa10.75□□□□□ -0.69
SMARCD1-210ENST00000551352 UPF1Q92900 1129 aaKnown RBP eCLIP10.75□□□□□ -0.69
SMARCD1-210ENST00000551352 USP32Q8NFA0 1604 aa10.75□□□□□ -0.69
SMARCD1-210ENST00000551352 SOS2Q07890 1332 aaPredicted RBP10.75□□□□□ -0.69
SMARCD1-210ENST00000551352 PLEKHH1Q9ULM0 1364 aa10.75□□□□□ -0.69
SMARCD1-210ENST00000551352 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.75□□□□□ -0.69
SMARCD1-210ENST00000551352 MYOM2P54296 1465 aa10.74□□□□□ -0.69
SMARCD1-210ENST00000551352 MEX3CQ5U5Q3 659 aaKnown RBP10.74□□□□□ -0.69
SMARCD1-210ENST00000551352 SLC4A1APQ9BWU0 796 aaKnown RBP10.74□□□□□ -0.69
SMARCD1-210ENST00000551352 BRWD3Q6RI45 1802 aa10.74□□□□□ -0.69
SMARCD1-210ENST00000551352 PIK3C2GO75747 1445 aa10.74□□□□□ -0.69
SMARCD1-210ENST00000551352 EP400Q96L91 3159 aa10.73□□□□□ -0.69
SMARCD1-210ENST00000551352 ZNF772Q68DY9 489 aaPredicted RBP10.73□□□□□ -0.69
SMARCD1-210ENST00000551352 RPGRIP1LQ68CZ1 1315 aa10.73□□□□□ -0.69
SMARCD1-210ENST00000551352 NRXN1Q9ULB1 1477 aa10.73□□□□□ -0.69
SMARCD1-210ENST00000551352 VGFO15240 615 aaPredicted RBP10.72□□□□□ -0.69
SMARCD1-210ENST00000551352 LRRC59Q96AG4 307 aaKnown RBP10.72□□□□□ -0.69
SMARCD1-210ENST00000551352 ACIN1Q9UKV3 1341 aaKnown RBP10.72□□□□□ -0.69
SMARCD1-210ENST00000551352 KIF1AQ12756 1690 aa10.72□□□□□ -0.69
SMARCD1-210ENST00000551352 PLCH1Q4KWH8 1693 aa10.71□□□□□ -0.69
SMARCD1-210ENST00000551352 TRPM3Q9HCF6 1732 aaPredicted RBP10.7□□□□□ -0.7
SMARCD1-210ENST00000551352 CRYBG1Q9Y4K1 1723 aa10.7□□□□□ -0.7
SMARCD1-210ENST00000551352 GLI3P10071 1580 aa10.7□□□□□ -0.7
SMARCD1-210ENST00000551352 CCDC144AA2RUR9 1427 aa10.7□□□□□ -0.7
SMARCD1-210ENST00000551352 LRPPRCP42704 1394 aaKnown RBP10.7□□□□□ -0.7
SMARCD1-210ENST00000551352 C8orf37Q96NL8 207 aa10.7□□□□□ -0.7
SMARCD1-210ENST00000551352 ATRNO75882 1429 aa10.69□□□□□ -0.7
SMARCD1-210ENST00000551352 RXRBP28702 533 aa10.69□□□□□ -0.7
SMARCD1-210ENST00000551352 TMEM132EQ6IEE7 984 aa10.69□□□□□ -0.7
SMARCD1-210ENST00000551352 WAPLQ7Z5K2 1190 aa10.69□□□□□ -0.7
SMARCD1-210ENST00000551352 MPHOSPH9Q99550 1183 aa10.69□□□□□ -0.7
SMARCD1-210ENST00000551352 BCL9LQ86UU0 1499 aa10.68□□□□□ -0.7
SMARCD1-210ENST00000551352 YTHDC2Q9H6S0 1430 aaKnown RBP10.68□□□□□ -0.7
SMARCD1-210ENST00000551352 ADAMTS2O95450 1211 aa10.68□□□□□ -0.7
SMARCD1-210ENST00000551352 RGL3Q3MIN7 710 aa10.68□□□□□ -0.7
SMARCD1-210ENST00000551352 ADGRB1O14514 1584 aa10.68□□□□□ -0.7
SMARCD1-210ENST00000551352 NRAPQ86VF7 1730 aa10.67□□□□□ -0.7
SMARCD1-210ENST00000551352 ABCC11Q96J66 1382 aa10.67□□□□□ -0.7
SMARCD1-210ENST00000551352 XPCQ01831 940 aaPredicted RBP10.67□□□□□ -0.7
SMARCD1-210ENST00000551352 QTRT2Q9H974 415 aaKnown RBP10.67□□□□□ -0.7
SMARCD1-210ENST00000551352 ADGRB2O60241 1585 aa10.67□□□□□ -0.7
SMARCD1-210ENST00000551352 ARHGEF28Q8N1W1 1705 aaKnown RBP10.67□□□□□ -0.7
SMARCD1-210ENST00000551352 ALS2Q96Q42 1657 aa10.66□□□□□ -0.7
SMARCD1-210ENST00000551352 ANKRD30BQ9BXX2 1392 aa10.66□□□□□ -0.7
SMARCD1-210ENST00000551352 STK26Q9P289 416 aa10.66□□□□□ -0.7
SMARCD1-210ENST00000551352 NWD2Q9ULI1 1742 aa10.65□□□□□ -0.7
SMARCD1-210ENST00000551352 NUTM2FA1L443 756 aa10.65□□□□□ -0.7
SMARCD1-210ENST00000551352 RBM6P78332 1123 aaKnown RBP10.65□□□□□ -0.7
SMARCD1-210ENST00000551352 FNBP4Q8N3X1 1017 aaPredicted RBP10.65□□□□□ -0.7
SMARCD1-210ENST00000551352 SIN3AQ96ST3 1273 aa10.65□□□□□ -0.7
SMARCD1-210ENST00000551352 SLIT2O94813 1529 aa10.64□□□□□ -0.71
SMARCD1-210ENST00000551352 DLC1Q96QB1 1528 aa10.64□□□□□ -0.71
SMARCD1-210ENST00000551352 NGLY1Q96IV0 654 aa10.64□□□□□ -0.71
SMARCD1-210ENST00000551352 FOXO3O43524 673 aa10.63□□□□□ -0.71
SMARCD1-210ENST00000551352 ESCO1Q5FWF5 840 aa10.63□□□□□ -0.71
SMARCD1-210ENST00000551352 USP21Q9UK80 565 aa10.63□□□□□ -0.71
SMARCD1-210ENST00000551352 TIMELESSQ9UNS1 1208 aa10.63□□□□□ -0.71
SMARCD1-210ENST00000551352 NPHP3Q7Z494 1330 aa10.62□□□□□ -0.71
SMARCD1-210ENST00000551352 NEUROD1Q13562 356 aa10.62□□□□□ -0.71
SMARCD1-210ENST00000551352 CFAP70Q5T0N1 1121 aa10.62□□□□□ -0.71
SMARCD1-210ENST00000551352 C14orf93Q9H972 538 aaKnown RBP10.62□□□□□ -0.71
SMARCD1-210ENST00000551352 SPATA31A3Q5VYP0 1347 aa10.61□□□□□ -0.71
SMARCD1-210ENST00000551352 RALGAPBQ86X10 1494 aa10.61□□□□□ -0.71
SMARCD1-210ENST00000551352 TOPAZ1Q8N9V7 1692 aa10.6□□□□□ -0.71
SMARCD1-210ENST00000551352 TNS3Q68CZ2 1445 aa10.6□□□□□ -0.71
SMARCD1-210ENST00000551352 ZNF316A6NFI3 1004 aaPredicted RBP10.6□□□□□ -0.71
SMARCD1-210ENST00000551352 SRCAPQ6ZRS2 3230 aa10.6□□□□□ -0.71
SMARCD1-210ENST00000551352 PHRF1Q9P1Y6 1649 aaKnown RBP10.59□□□□□ -0.71
SMARCD1-210ENST00000551352 ITSN1Q15811 1721 aa10.59□□□□□ -0.71
SMARCD1-210ENST00000551352 TRPC5Q9UL62 973 aaPredicted RBP10.59□□□□□ -0.71
SMARCD1-210ENST00000551352 TONSLQ96HA7 1378 aa10.59□□□□□ -0.71
SMARCD1-210ENST00000551352 PRR36Q9H6K5 1346 aa10.58□□□□□ -0.71
SMARCD1-210ENST00000551352 SIRT1Q96EB6 747 aa10.58□□□□□ -0.72
SMARCD1-210ENST00000551352 ATAD2Q6PL18 1390 aa10.57□□□□□ -0.72
SMARCD1-210ENST00000551352 SAFB2Q14151 953 aaKnown RBP eCLIP10.57□□□□□ -0.72
SMARCD1-210ENST00000551352 KRT28Q7Z3Y7 464 aa10.57□□□□□ -0.72
SMARCD1-210ENST00000551352 CABLES1Q8TDN4 633 aa10.57□□□□□ -0.72
SMARCD1-210ENST00000551352 TULP4Q9NRJ4 1543 aa10.57□□□□□ -0.72
SMARCD1-210ENST00000551352 COL14A1Q05707 1796 aaKnown RBP10.57□□□□□ -0.72
SMARCD1-210ENST00000551352 TNS1Q9HBL0 1735 aaKnown RBP10.56□□□□□ -0.72
SMARCD1-210ENST00000551352 KIAA1210Q9ULL0 1709 aa10.56□□□□□ -0.72
SMARCD1-210ENST00000551352 PRAM1Q96QH2 718 aa10.56□□□□□ -0.72
SMARCD1-210ENST00000551352 PHF8Q9UPP1 1060 aa10.56□□□□□ -0.72
SMARCD1-210ENST00000551352 ANKARQ7Z5J8 1434 aa10.56□□□□□ -0.72
SMARCD1-210ENST00000551352 THSD7AQ9UPZ6 1657 aa10.56□□□□□ -0.72
SMARCD1-210ENST00000551352 SBNO1A3KN83 1393 aa10.55□□□□□ -0.72
SMARCD1-210ENST00000551352 GJD4Q96KN9 370 aaPredicted RBP10.55□□□□□ -0.72
SMARCD1-210ENST00000551352 ATP7BP35670 1465 aa10.55□□□□□ -0.72
SMARCD1-210ENST00000551352 UNC5CLQ8IV45 518 aa10.53□□□□□ -0.72
SMARCD1-210ENST00000551352 PMFBP1Q8TBY8 1022 aa10.53□□□□□ -0.72
SMARCD1-210ENST00000551352 HIRIP3Q9BW71 556 aaPredicted RBP10.52□□□□□ -0.73
SMARCD1-210ENST00000551352 RGPD1P0DJD0 1748 aa10.52□□□□□ -0.73
SMARCD1-210ENST00000551352 PLEKHG5O94827 1062 aa10.51□□□□□ -0.73
SMARCD1-210ENST00000551352 TRAK1Q9UPV9 953 aa10.51□□□□□ -0.73
SMARCD1-210ENST00000551352 MINK1Q8N4C8 1332 aaPredicted RBP10.51□□□□□ -0.73
SMARCD1-210ENST00000551352 NRKQ7Z2Y5 1582 aa10.51□□□□□ -0.73
SMARCD1-210ENST00000551352 LMO7Q8WWI1 1683 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms