RNA–Protein interactions for RNA: ENST00000551216.2

SCN8A-207, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 1,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-207ENST00000551216 NUDCQ9Y266 331 aa19.4■□□□□ 0.7
SCN8A-207ENST00000551216 KNDC1Q76NI1 1749 aa19.39■□□□□ 0.7
SCN8A-207ENST00000551216 NSD3Q9BZ95 1437 aa19.38■□□□□ 0.69
SCN8A-207ENST00000551216 TMEM2Q9UHN6 1383 aa19.37■□□□□ 0.69
SCN8A-207ENST00000551216 CGNL1Q0VF96 1302 aa19.37■□□□□ 0.69
SCN8A-207ENST00000551216 TECPR2O15040 1411 aa19.36■□□□□ 0.69
SCN8A-207ENST00000551216 FER1L4A9Z1Z3 1794 aa19.36■□□□□ 0.69
SCN8A-207ENST00000551216 POGKQ9P215 609 aa19.36■□□□□ 0.69
SCN8A-207ENST00000551216 C3P01024 1663 aa19.35■□□□□ 0.69
SCN8A-207ENST00000551216 PRAM1Q96QH2 718 aa19.35■□□□□ 0.69
SCN8A-207ENST00000551216 SLC12A5Q9H2X9 1139 aa19.35■□□□□ 0.69
SCN8A-207ENST00000551216 FAM135BQ49AJ0 1406 aa19.35■□□□□ 0.69
SCN8A-207ENST00000551216 POLR3AO14802 1390 aaPredicted RBP19.35■□□□□ 0.69
SCN8A-207ENST00000551216 NGEFQ8N5V2 710 aa19.34■□□□□ 0.69
SCN8A-207ENST00000551216 STK26Q9P289 416 aa19.34■□□□□ 0.69
SCN8A-207ENST00000551216 WDR43Q15061 677 aaKnown RBP eCLIP19.33■□□□□ 0.69
SCN8A-207ENST00000551216 MED14O60244 1454 aa19.32■□□□□ 0.68
SCN8A-207ENST00000551216 RNF123Q5XPI4 1314 aa19.31■□□□□ 0.68
SCN8A-207ENST00000551216 TERF2IPQ9NYB0 399 aa19.31■□□□□ 0.68
SCN8A-207ENST00000551216 SLIT1O75093 1534 aa19.31■□□□□ 0.68
SCN8A-207ENST00000551216 CPS1P31327 1500 aa19.31■□□□□ 0.68
SCN8A-207ENST00000551216 PLEKHG1Q9ULL1 1385 aa19.3■□□□□ 0.68
SCN8A-207ENST00000551216 SRPK2P78362 688 aaKnown RBP19.29■□□□□ 0.68
SCN8A-207ENST00000551216 TRHP20396 242 aaPredicted RBP19.29■□□□□ 0.68
SCN8A-207ENST00000551216 MORC1Q86VD1 984 aa19.29■□□□□ 0.68
SCN8A-207ENST00000551216 ADAMTS8Q9UP79 889 aa19.29■□□□□ 0.68
SCN8A-207ENST00000551216 ANKRD26Q9UPS8 1709 aa19.28■□□□□ 0.68
SCN8A-207ENST00000551216 ARHGAP23Q9P227 1491 aa19.28■□□□□ 0.68
SCN8A-207ENST00000551216 CABP2Q9NPB3 220 aa19.28■□□□□ 0.68
SCN8A-207ENST00000551216 ATP7BP35670 1465 aa19.28■□□□□ 0.68
SCN8A-207ENST00000551216 MINK1Q8N4C8 1332 aaPredicted RBP19.26■□□□□ 0.67
SCN8A-207ENST00000551216 A0A1W2PP64 1363 aa19.26■□□□□ 0.67
SCN8A-207ENST00000551216 CDK19Q9BWU1 502 aa19.25■□□□□ 0.67
SCN8A-207ENST00000551216 METP08581 1390 aa19.24■□□□□ 0.67
SCN8A-207ENST00000551216 DIP2AQ14689 1571 aa19.24■□□□□ 0.67
SCN8A-207ENST00000551216 SAFB2Q14151 953 aaKnown RBP eCLIP19.24■□□□□ 0.67
SCN8A-207ENST00000551216 EID1Q9Y6B2 187 aa19.24■□□□□ 0.67
SCN8A-207ENST00000551216 ADAMTS13Q76LX8 1427 aa19.24■□□□□ 0.67
SCN8A-207ENST00000551216 CD163L1Q9NR16 1453 aa19.23■□□□□ 0.67
SCN8A-207ENST00000551216 HDGFL2Q7Z4V5 671 aaPredicted RBP19.23■□□□□ 0.67
SCN8A-207ENST00000551216 THEMISQ8N1K5 641 aaPredicted RBP19.22■□□□□ 0.67
SCN8A-207ENST00000551216 CFAP53Q96M91 514 aa19.22■□□□□ 0.67
SCN8A-207ENST00000551216 ADGRB2O60241 1585 aa19.21■□□□□ 0.67
SCN8A-207ENST00000551216 PPP4R2Q9NY27 417 aa19.21■□□□□ 0.67
SCN8A-207ENST00000551216 NCBP3Q53F19 620 aaKnown RBP19.2■□□□□ 0.66
SCN8A-207ENST00000551216 SHPRHQ149N8 1683 aa19.2■□□□□ 0.66
SCN8A-207ENST00000551216 WASLO00401 505 aaPredicted RBP19.19■□□□□ 0.66
SCN8A-207ENST00000551216 KIF20BQ96Q89 1820 aa19.19■□□□□ 0.66
SCN8A-207ENST00000551216 ZNF521Q96K83 1311 aa19.18■□□□□ 0.66
SCN8A-207ENST00000551216 TXNDC2Q86VQ3 553 aa19.18■□□□□ 0.66
SCN8A-207ENST00000551216 PLEKHH1Q9ULM0 1364 aa19.17■□□□□ 0.66
SCN8A-207ENST00000551216 WAPLQ7Z5K2 1190 aa19.17■□□□□ 0.66
SCN8A-207ENST00000551216 TBX22Q9Y458 520 aa19.17■□□□□ 0.66
SCN8A-207ENST00000551216 CPSF1Q10570 1443 aaKnown RBP19.16■□□□□ 0.66
SCN8A-207ENST00000551216 LTKP29376 864 aa19.15■□□□□ 0.66
SCN8A-207ENST00000551216 CEBPAP49715 358 aaPredicted RBP19.15■□□□□ 0.66
SCN8A-207ENST00000551216 BCANQ96GW7 911 aa19.15■□□□□ 0.66
SCN8A-207ENST00000551216 CABP1Q9NZU7 370 aa19.14■□□□□ 0.66
SCN8A-207ENST00000551216 RCAN3Q9UKA8 241 aa19.14■□□□□ 0.66
SCN8A-207ENST00000551216 CDC42BPGQ6DT37 1551 aa19.14■□□□□ 0.65
SCN8A-207ENST00000551216 PTCH1Q13635 1447 aa19.14■□□□□ 0.65
SCN8A-207ENST00000551216 EDC4Q6P2E9 1401 aaKnown RBP19.14■□□□□ 0.65
SCN8A-207ENST00000551216 FYB1O15117 783 aa19.14■□□□□ 0.65
SCN8A-207ENST00000551216 MTHFSP49914 203 aa19.14■□□□□ 0.65
SCN8A-207ENST00000551216 CEP170BQ9Y4F5 1589 aaPredicted RBP19.13■□□□□ 0.65
SCN8A-207ENST00000551216 GOLGA2Q08379 1002 aa19.13■□□□□ 0.65
SCN8A-207ENST00000551216 PIK3R4Q99570 1358 aa19.13■□□□□ 0.65
SCN8A-207ENST00000551216 ZNF142P52746 1687 aaPredicted RBP19.12■□□□□ 0.65
SCN8A-207ENST00000551216 ADAMTSL3P82987 1691 aa19.12■□□□□ 0.65
SCN8A-207ENST00000551216 CCDC61Q9Y6R9 512 aa19.12■□□□□ 0.65
SCN8A-207ENST00000551216 MON2Q7Z3U7 1717 aa19.12■□□□□ 0.65
SCN8A-207ENST00000551216 SENP3Q9H4L4 574 aaPredicted RBP19.11■□□□□ 0.65
SCN8A-207ENST00000551216 AKAP12Q02952 1782 aa19.11■□□□□ 0.65
SCN8A-207ENST00000551216 SETD1BQ9UPS6 1966 aaKnown RBP19.11■□□□□ 0.65
SCN8A-207ENST00000551216 PPIP5K1Q6PFW1 1433 aa19.11■□□□□ 0.65
SCN8A-207ENST00000551216 ROBO2Q9HCK4 1378 aa19.11■□□□□ 0.65
SCN8A-207ENST00000551216 ZNF692Q9BU19 519 aaPredicted RBP19.11■□□□□ 0.65
SCN8A-207ENST00000551216 RIMS1Q86UR5 1692 aaKnown RBP19.1■□□□□ 0.65
SCN8A-207ENST00000551216 RUNDC1Q96C34 613 aa19.1■□□□□ 0.65
SCN8A-207ENST00000551216 ITSN1Q15811 1721 aa19.1■□□□□ 0.65
SCN8A-207ENST00000551216 SALL2Q9Y467 1007 aaPredicted RBP19.09■□□□□ 0.65
SCN8A-207ENST00000551216 PNPLA6Q8IY17 1366 aa19.08■□□□□ 0.65
SCN8A-207ENST00000551216 TOPAZ1Q8N9V7 1692 aa19.08■□□□□ 0.65
SCN8A-207ENST00000551216 RRP1P56182 461 aaKnown RBP19.08■□□□□ 0.65
SCN8A-207ENST00000551216 TRMT2AQ8IZ69 625 aaKnown RBP19.08■□□□□ 0.65
SCN8A-207ENST00000551216 NUDT16Q96DE0 195 aaKnown RBP19.08■□□□□ 0.65
SCN8A-207ENST00000551216 CDCA7LQ96GN5 454 aa19.08■□□□□ 0.65
SCN8A-207ENST00000551216 IRX6P78412 446 aaPredicted RBP19.07■□□□□ 0.64
SCN8A-207ENST00000551216 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.07■□□□□ 0.64
SCN8A-207ENST00000551216 XRN1Q8IZH2 1706 aaKnown RBP19.07■□□□□ 0.64
SCN8A-207ENST00000551216 APAF1O14727 1248 aa19.07■□□□□ 0.64
SCN8A-207ENST00000551216 CCDC27Q2M243 656 aa19.07■□□□□ 0.64
SCN8A-207ENST00000551216 COL3A1P02461 1466 aaPredicted RBP19.07■□□□□ 0.64
SCN8A-207ENST00000551216 IQSEC2Q5JU85 1478 aa19.07■□□□□ 0.64
SCN8A-207ENST00000551216 E9PSI1 815 aa19.06■□□□□ 0.64
SCN8A-207ENST00000551216 TNNT2P45379 298 aaPredicted RBP19.06■□□□□ 0.64
SCN8A-207ENST00000551216 SLFN5Q08AF3 891 aa19.06■□□□□ 0.64
SCN8A-207ENST00000551216 DUSP27Q5VZP5 1158 aa19.06■□□□□ 0.64
SCN8A-207ENST00000551216 GGNBP2Q9H3C7 697 aa19.06■□□□□ 0.64
SCN8A-207ENST00000551216 PTPRUQ92729 1446 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms