RNA–Protein interactions for RNA: ENST00000551179.1

CNOT2-229, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 355 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-229ENST00000551179 ERVK-7P63135 1459 aa13.67□□□□□ -0.22
CNOT2-229ENST00000551179 ZFYVE9O95405 1425 aa13.66□□□□□ -0.22
CNOT2-229ENST00000551179 WDR43Q15061 677 aaKnown RBP eCLIP13.66□□□□□ -0.22
CNOT2-229ENST00000551179 SIGLEC1Q9BZZ2 1709 aa13.66□□□□□ -0.22
CNOT2-229ENST00000551179 QRICH2Q9H0J4 1663 aa13.66□□□□□ -0.22
CNOT2-229ENST00000551179 PER1O15534 1290 aaPredicted RBP13.65□□□□□ -0.22
CNOT2-229ENST00000551179 MYOM1P52179 1685 aa13.64□□□□□ -0.23
CNOT2-229ENST00000551179 PDE3BQ13370 1112 aa13.64□□□□□ -0.23
CNOT2-229ENST00000551179 EVC2Q86UK5 1308 aa13.64□□□□□ -0.23
CNOT2-229ENST00000551179 ADGRB1O14514 1584 aa13.63□□□□□ -0.23
CNOT2-229ENST00000551179 TRAK1Q9UPV9 953 aa13.62□□□□□ -0.23
CNOT2-229ENST00000551179 CFAP65Q6ZU64 1925 aaKnown RBP13.62□□□□□ -0.23
CNOT2-229ENST00000551179 NINLQ9Y2I6 1382 aa13.61□□□□□ -0.23
CNOT2-229ENST00000551179 CLTCQ00610 1675 aaKnown RBP13.61□□□□□ -0.23
CNOT2-229ENST00000551179 PUS7Q96PZ0 661 aaKnown RBP13.61□□□□□ -0.23
CNOT2-229ENST00000551179 TMEM131LA2VDJ0 1609 aa13.61□□□□□ -0.23
CNOT2-229ENST00000551179 BLMP54132 1417 aaPredicted RBP13.6□□□□□ -0.23
CNOT2-229ENST00000551179 IDI1Q13907 227 aa13.6□□□□□ -0.23
CNOT2-229ENST00000551179 SPATA31D1Q6ZQQ2 1576 aa13.6□□□□□ -0.23
CNOT2-229ENST00000551179 PROM2Q8N271 834 aa13.59□□□□□ -0.23
CNOT2-229ENST00000551179 SPDYE1Q8NFV5 336 aaPredicted RBP13.59□□□□□ -0.23
CNOT2-229ENST00000551179 SP7Q8TDD2 431 aaPredicted RBP13.59□□□□□ -0.23
CNOT2-229ENST00000551179 KIF13AQ9H1H9 1805 aa13.59□□□□□ -0.23
CNOT2-229ENST00000551179 HDGFP51858 240 aaKnown RBP13.58□□□□□ -0.24
CNOT2-229ENST00000551179 PPP4R2Q9NY27 417 aa13.58□□□□□ -0.24
CNOT2-229ENST00000551179 ARHGEF28Q8N1W1 1705 aaKnown RBP13.58□□□□□ -0.24
CNOT2-229ENST00000551179 AMER1Q5JTC6 1135 aaPredicted RBP13.57□□□□□ -0.24
CNOT2-229ENST00000551179 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.57□□□□□ -0.24
CNOT2-229ENST00000551179 CLEC11AQ9Y240 323 aa13.57□□□□□ -0.24
CNOT2-229ENST00000551179 NSD2O96028 1365 aa13.57□□□□□ -0.24
CNOT2-229ENST00000551179 PPP2R1AP30153 589 aa13.56□□□□□ -0.24
CNOT2-229ENST00000551179 USP32Q8NFA0 1604 aa13.56□□□□□ -0.24
CNOT2-229ENST00000551179 ATAD2Q6PL18 1390 aa13.56□□□□□ -0.24
CNOT2-229ENST00000551179 NSD3Q9BZ95 1437 aa13.56□□□□□ -0.24
CNOT2-229ENST00000551179 POGKQ9P215 609 aa13.55□□□□□ -0.24
CNOT2-229ENST00000551179 CGNL1Q0VF96 1302 aa13.55□□□□□ -0.24
CNOT2-229ENST00000551179 MLECQ14165 292 aa13.54□□□□□ -0.24
CNOT2-229ENST00000551179 PITPNM1O00562 1244 aa13.53□□□□□ -0.24
CNOT2-229ENST00000551179 NUTM2DQ5VT03 806 aaPredicted RBP13.53□□□□□ -0.24
CNOT2-229ENST00000551179 TMEM132EQ6IEE7 984 aa13.53□□□□□ -0.24
CNOT2-229ENST00000551179 CFAP53Q96M91 514 aa13.53□□□□□ -0.24
CNOT2-229ENST00000551179 ANKRD36BQ8N2N9 1353 aa13.53□□□□□ -0.24
CNOT2-229ENST00000551179 RIMS2Q9UQ26 1411 aa13.53□□□□□ -0.24
CNOT2-229ENST00000551179 MORC1Q86VD1 984 aa13.52□□□□□ -0.25
CNOT2-229ENST00000551179 NGEFQ8N5V2 710 aa13.52□□□□□ -0.25
CNOT2-229ENST00000551179 YTHDC2Q9H6S0 1430 aaKnown RBP13.52□□□□□ -0.25
CNOT2-229ENST00000551179 MYO5BQ9ULV0 1848 aa13.52□□□□□ -0.25
CNOT2-229ENST00000551179 A2ML1A8K2U0 1454 aa13.51□□□□□ -0.25
CNOT2-229ENST00000551179 SRPK2P78362 688 aaKnown RBP13.51□□□□□ -0.25
CNOT2-229ENST00000551179 IRX6P78412 446 aaPredicted RBP13.51□□□□□ -0.25
CNOT2-229ENST00000551179 ALKQ9UM73 1620 aa13.5□□□□□ -0.25
CNOT2-229ENST00000551179 DLC1Q96QB1 1528 aa13.5□□□□□ -0.25
CNOT2-229ENST00000551179 TULP4Q9NRJ4 1543 aa13.5□□□□□ -0.25
CNOT2-229ENST00000551179 TNRQ92752 1358 aa13.5□□□□□ -0.25
CNOT2-229ENST00000551179 FBXO31Q5XUX0 539 aaPredicted RBP13.5□□□□□ -0.25
CNOT2-229ENST00000551179 STK26Q9P289 416 aa13.5□□□□□ -0.25
CNOT2-229ENST00000551179 HDGFL2Q7Z4V5 671 aaPredicted RBP13.49□□□□□ -0.25
CNOT2-229ENST00000551179 TERF2IPQ9NYB0 399 aa13.49□□□□□ -0.25
CNOT2-229ENST00000551179 SALL2Q9Y467 1007 aaPredicted RBP13.48□□□□□ -0.25
CNOT2-229ENST00000551179 PTPRMP28827 1452 aa13.48□□□□□ -0.25
CNOT2-229ENST00000551179 POLR3AO14802 1390 aaPredicted RBP13.47□□□□□ -0.25
CNOT2-229ENST00000551179 ZMYM3Q14202 1370 aa13.47□□□□□ -0.25
CNOT2-229ENST00000551179 CHRDL2Q6WN34 429 aa13.47□□□□□ -0.25
CNOT2-229ENST00000551179 RCAN3Q9UKA8 241 aa13.47□□□□□ -0.25
CNOT2-229ENST00000551179 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.46□□□□□ -0.25
CNOT2-229ENST00000551179 PRAM1Q96QH2 718 aa13.46□□□□□ -0.25
CNOT2-229ENST00000551179 RNF123Q5XPI4 1314 aa13.45□□□□□ -0.26
CNOT2-229ENST00000551179 RRP1P56182 461 aaKnown RBP13.45□□□□□ -0.26
CNOT2-229ENST00000551179 SAFB2Q14151 953 aaKnown RBP eCLIP13.45□□□□□ -0.26
CNOT2-229ENST00000551179 ADAMTS8Q9UP79 889 aa13.45□□□□□ -0.26
CNOT2-229ENST00000551179 NLRP1Q9C000 1473 aa13.44□□□□□ -0.26
CNOT2-229ENST00000551179 SLC12A5Q9H2X9 1139 aa13.44□□□□□ -0.26
CNOT2-229ENST00000551179 MINK1Q8N4C8 1332 aaPredicted RBP13.43□□□□□ -0.26
CNOT2-229ENST00000551179 PRR29P0C7W0 189 aa13.43□□□□□ -0.26
CNOT2-229ENST00000551179 CCDC136Q96JN2 1154 aa13.43□□□□□ -0.26
CNOT2-229ENST00000551179 CARD14Q9BXL6 1004 aa13.43□□□□□ -0.26
CNOT2-229ENST00000551179 CABP2Q9NPB3 220 aa13.43□□□□□ -0.26
CNOT2-229ENST00000551179 GOLGA2Q08379 1002 aa13.42□□□□□ -0.26
CNOT2-229ENST00000551179 TSHZ2Q9NRE2 1034 aa13.42□□□□□ -0.26
CNOT2-229ENST00000551179 ABCC11Q96J66 1382 aa13.42□□□□□ -0.26
CNOT2-229ENST00000551179 KNDC1Q76NI1 1749 aa13.42□□□□□ -0.26
CNOT2-229ENST00000551179 FBXO3Q9UK99 471 aa13.41□□□□□ -0.26
CNOT2-229ENST00000551179 ATP7BP35670 1465 aa13.41□□□□□ -0.26
CNOT2-229ENST00000551179 A0A1W2PP64 1363 aa13.4□□□□□ -0.26
CNOT2-229ENST00000551179 MED14O60244 1454 aa13.4□□□□□ -0.26
CNOT2-229ENST00000551179 SENP3-EIF4A1A0A087X0R7 540 aa13.39□□□□□ -0.27
CNOT2-229ENST00000551179 EID1Q9Y6B2 187 aa13.39□□□□□ -0.27
CNOT2-229ENST00000551179 ANKRD26Q9UPS8 1709 aa13.39□□□□□ -0.27
CNOT2-229ENST00000551179 FAM135BQ49AJ0 1406 aa13.39□□□□□ -0.27
CNOT2-229ENST00000551179 TMEM2Q9UHN6 1383 aa13.38□□□□□ -0.27
CNOT2-229ENST00000551179 E9PSI1 815 aa13.38□□□□□ -0.27
CNOT2-229ENST00000551179 PNNQ9H307 717 aaKnown RBP13.38□□□□□ -0.27
CNOT2-229ENST00000551179 CPS1P31327 1500 aa13.38□□□□□ -0.27
CNOT2-229ENST00000551179 SETD1AO15047 1707 aaKnown RBP13.37□□□□□ -0.27
CNOT2-229ENST00000551179 UBR1Q8IWV7 1749 aa13.37□□□□□ -0.27
CNOT2-229ENST00000551179 TNNT2P45379 298 aaPredicted RBP13.37□□□□□ -0.27
CNOT2-229ENST00000551179 B4GALNT3Q6L9W6 998 aa13.37□□□□□ -0.27
CNOT2-229ENST00000551179 RUNDC1Q96C34 613 aa13.37□□□□□ -0.27
CNOT2-229ENST00000551179 CDK19Q9BWU1 502 aa13.37□□□□□ -0.27
CNOT2-229ENST00000551179 NEFMP07197 916 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms