RNA–Protein interactions for RNA: ENST00000550974.1

GPN3-208, Transcript of GPN-loop GTPase 3, humanhuman

TSL 5

Gene GPN3, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-208ENST00000550974 ABCC5O15440 1437 aa17.97■□□□□ 0.47
GPN3-208ENST00000550974 A0A0G2JS52 829 aa17.96■□□□□ 0.47
GPN3-208ENST00000550974 MYT1Q01538 1121 aa17.96■□□□□ 0.47
GPN3-208ENST00000550974 METP08581 1390 aa17.95■□□□□ 0.46
GPN3-208ENST00000550974 SLIT2O94813 1529 aa17.95■□□□□ 0.46
GPN3-208ENST00000550974 C1QTNF8P60827 252 aa17.94■□□□□ 0.46
GPN3-208ENST00000550974 XPCQ01831 940 aaPredicted RBP17.94■□□□□ 0.46
GPN3-208ENST00000550974 PPP1R1BQ9UD71 204 aaPredicted RBP17.94■□□□□ 0.46
GPN3-208ENST00000550974 CHIC2Q9UKJ5 165 aa17.94■□□□□ 0.46
GPN3-208ENST00000550974 ONECUT3O60422 494 aaPredicted RBP17.93■□□□□ 0.46
GPN3-208ENST00000550974 EZH2Q15910 746 aaKnown RBP17.93■□□□□ 0.46
GPN3-208ENST00000550974 VPS72Q15906 364 aa17.92■□□□□ 0.46
GPN3-208ENST00000550974 CROCC2H7BZ55 1655 aa17.91■□□□□ 0.46
GPN3-208ENST00000550974 NPHP3Q7Z494 1330 aa17.91■□□□□ 0.46
GPN3-208ENST00000550974 ANKRD30AQ9BXX3 1397 aa17.9■□□□□ 0.46
GPN3-208ENST00000550974 ESCO1Q5FWF5 840 aa17.89■□□□□ 0.45
GPN3-208ENST00000550974 FAM182BQ5T319 152 aa17.89■□□□□ 0.45
GPN3-208ENST00000550974 NRXN3Q9Y4C0 1643 aa17.89■□□□□ 0.45
GPN3-208ENST00000550974 FOXO3O43524 673 aa17.88■□□□□ 0.45
GPN3-208ENST00000550974 DAPK1P53355 1430 aa17.88■□□□□ 0.45
GPN3-208ENST00000550974 PXDNQ92626 1479 aa17.87■□□□□ 0.45
GPN3-208ENST00000550974 RGPD1P0DJD0 1748 aa17.85■□□□□ 0.45
GPN3-208ENST00000550974 NINLQ9Y2I6 1382 aa17.84■□□□□ 0.45
GPN3-208ENST00000550974 HAP1P54257 671 aaPredicted RBP17.84■□□□□ 0.45
GPN3-208ENST00000550974 FAM98CQ17RN3 349 aaKnown RBP17.84■□□□□ 0.45
GPN3-208ENST00000550974 SPON1Q9HCB6 807 aa17.84■□□□□ 0.45
GPN3-208ENST00000550974 DISP2A7MBM2 1401 aa17.83■□□□□ 0.45
GPN3-208ENST00000550974 KANK4Q5T7N3 995 aaPredicted RBP17.83■□□□□ 0.44
GPN3-208ENST00000550974 PLEKHG5O94827 1062 aa17.82■□□□□ 0.44
GPN3-208ENST00000550974 CAMKK2Q96RR4 588 aa17.82■□□□□ 0.44
GPN3-208ENST00000550974 CAMTA1Q9Y6Y1 1673 aa17.82■□□□□ 0.44
GPN3-208ENST00000550974 PTPN23Q9H3S7 1636 aa17.81■□□□□ 0.44
GPN3-208ENST00000550974 ZNF326Q5BKZ1 582 aaKnown RBP17.81■□□□□ 0.44
GPN3-208ENST00000550974 ADGRL2O95490 1459 aa17.81■□□□□ 0.44
GPN3-208ENST00000550974 USP32Q8NFA0 1604 aa17.8■□□□□ 0.44
GPN3-208ENST00000550974 LRPPRCP42704 1394 aaKnown RBP17.79■□□□□ 0.44
GPN3-208ENST00000550974 KCNQ2O43526 872 aa17.79■□□□□ 0.44
GPN3-208ENST00000550974 ROBO2Q9HCK4 1378 aa17.79■□□□□ 0.44
GPN3-208ENST00000550974 SPATA31A3Q5VYP0 1347 aa17.77■□□□□ 0.44
GPN3-208ENST00000550974 TRIM37O94972 964 aa17.77■□□□□ 0.44
GPN3-208ENST00000550974 NBPF8Q3BBV2 869 aa17.77■□□□□ 0.44
GPN3-208ENST00000550974 NBPF14Q5TI25 921 aa17.77■□□□□ 0.44
GPN3-208ENST00000550974 CABLES1Q8TDN4 633 aa17.77■□□□□ 0.44
GPN3-208ENST00000550974 TNS1Q9HBL0 1735 aaKnown RBP17.76■□□□□ 0.43
GPN3-208ENST00000550974 APBA3O96018 575 aa17.76■□□□□ 0.43
GPN3-208ENST00000550974 NUTM2FA1L443 756 aa17.75■□□□□ 0.43
GPN3-208ENST00000550974 ANKRD50Q9ULJ7 1429 aa17.74■□□□□ 0.43
GPN3-208ENST00000550974 E9PCH4 1651 aa17.74■□□□□ 0.43
GPN3-208ENST00000550974 PLCH1Q4KWH8 1693 aa17.74■□□□□ 0.43
GPN3-208ENST00000550974 ADGRB2O60241 1585 aa17.72■□□□□ 0.43
GPN3-208ENST00000550974 PARD3Q8TEW0 1356 aa17.72■□□□□ 0.43
GPN3-208ENST00000550974 NWD2Q9ULI1 1742 aa17.72■□□□□ 0.43
GPN3-208ENST00000550974 IQGAP3Q86VI3 1631 aa17.72■□□□□ 0.43
GPN3-208ENST00000550974 FAM83GA6ND36 823 aa17.71■□□□□ 0.43
GPN3-208ENST00000550974 KRT28Q7Z3Y7 464 aa17.7■□□□□ 0.42
GPN3-208ENST00000550974 GIGYF1O75420 1035 aaPredicted RBP17.69■□□□□ 0.42
GPN3-208ENST00000550974 HFM1A2PYH4 1435 aa17.69■□□□□ 0.42
GPN3-208ENST00000550974 FAM196AQ6ZSG2 479 aa17.68■□□□□ 0.42
GPN3-208ENST00000550974 BTG4Q9NY30 223 aa17.68■□□□□ 0.42
GPN3-208ENST00000550974 LMOD2Q6P5Q4 547 aa17.67■□□□□ 0.42
GPN3-208ENST00000550974 CCDC144AA2RUR9 1427 aa17.65■□□□□ 0.42
GPN3-208ENST00000550974 NUP188Q5SRE5 1749 aa17.65■□□□□ 0.42
GPN3-208ENST00000550974 CDC42BPGQ6DT37 1551 aa17.65■□□□□ 0.42
GPN3-208ENST00000550974 RREB1Q92766 1687 aa17.64■□□□□ 0.41
GPN3-208ENST00000550974 SPATA31A5Q5VU36 1347 aa17.63■□□□□ 0.41
GPN3-208ENST00000550974 SPATA31A7Q8IWB4 1347 aa17.63■□□□□ 0.41
GPN3-208ENST00000550974 TNS3Q68CZ2 1445 aa17.63■□□□□ 0.41
GPN3-208ENST00000550974 NEXMIFQ5QGS0 1516 aa17.62■□□□□ 0.41
GPN3-208ENST00000550974 NRKQ7Z2Y5 1582 aa17.62■□□□□ 0.41
GPN3-208ENST00000550974 NRAPQ86VF7 1730 aa17.61■□□□□ 0.41
GPN3-208ENST00000550974 UTRNP46939 3433 aa17.61■□□□□ 0.41
GPN3-208ENST00000550974 PSME1Q06323 249 aa17.61■□□□□ 0.41
GPN3-208ENST00000550974 NAIPQ13075 1403 aa17.61■□□□□ 0.41
GPN3-208ENST00000550974 PRAG1Q86YV5 1406 aa17.6■□□□□ 0.41
GPN3-208ENST00000550974 THSD7AQ9UPZ6 1657 aa17.59■□□□□ 0.41
GPN3-208ENST00000550974 VPS8Q8N3P4 1428 aa17.59■□□□□ 0.41
GPN3-208ENST00000550974 SYT17Q9BSW7 474 aa17.58■□□□□ 0.4
GPN3-208ENST00000550974 ZBTB7AO95365 584 aa17.57■□□□□ 0.4
GPN3-208ENST00000550974 FHDC1Q9C0D6 1143 aaPredicted RBP17.57■□□□□ 0.4
GPN3-208ENST00000550974 NUP155O75694 1391 aa17.56■□□□□ 0.4
GPN3-208ENST00000550974 ABCA3Q99758 1704 aa17.56■□□□□ 0.4
GPN3-208ENST00000550974 ARHGEF10O15013 1369 aa17.55■□□□□ 0.4
GPN3-208ENST00000550974 KIF1AQ12756 1690 aa17.55■□□□□ 0.4
GPN3-208ENST00000550974 CHD4Q14839 1912 aa17.55■□□□□ 0.4
GPN3-208ENST00000550974 VGFO15240 615 aaPredicted RBP17.55■□□□□ 0.4
GPN3-208ENST00000550974 WAPLQ7Z5K2 1190 aa17.55■□□□□ 0.4
GPN3-208ENST00000550974 PDGFDQ9GZP0 370 aaPredicted RBP17.55■□□□□ 0.4
GPN3-208ENST00000550974 ATF5Q9Y2D1 282 aaPredicted RBP17.55■□□□□ 0.4
GPN3-208ENST00000550974 MYOM1P52179 1685 aa17.55■□□□□ 0.4
GPN3-208ENST00000550974 PTGER2P43116 358 aa17.54■□□□□ 0.4
GPN3-208ENST00000550974 FAM50AQ14320 339 aaKnown RBP17.54■□□□□ 0.4
GPN3-208ENST00000550974 PDE3BQ13370 1112 aa17.53■□□□□ 0.4
GPN3-208ENST00000550974 PHF8Q9UPP1 1060 aa17.53■□□□□ 0.4
GPN3-208ENST00000550974 CEP350Q5VT06 3117 aa17.53■□□□□ 0.4
GPN3-208ENST00000550974 SBNO1A3KN83 1393 aa17.53■□□□□ 0.4
GPN3-208ENST00000550974 STK26Q9P289 416 aa17.51■□□□□ 0.39
GPN3-208ENST00000550974 COL14A1Q05707 1796 aaKnown RBP17.51■□□□□ 0.39
GPN3-208ENST00000550974 SPATA31A1Q5TZJ5 1347 aa17.5■□□□□ 0.39
GPN3-208ENST00000550974 ANO8Q9HCE9 1232 aaPredicted RBP17.5■□□□□ 0.39
GPN3-208ENST00000550974 RRBP1Q9P2E9 1410 aaKnown RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms