RNA–Protein interactions for RNA: ENST00000550831.7

TMEM116-213, Transcript of transmembrane protein 116, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM116, Length 1,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-213ENST00000550831 ARHGEF28Q8N1W1 1705 aaKnown RBP12.53□□□□□ -0.4
TMEM116-213ENST00000550831 QRICH2Q9H0J4 1663 aa12.52□□□□□ -0.41
TMEM116-213ENST00000550831 POLR3GLQ9BT43 218 aa12.52□□□□□ -0.41
TMEM116-213ENST00000550831 LRPPRCP42704 1394 aaKnown RBP12.51□□□□□ -0.41
TMEM116-213ENST00000550831 CHGAP10645 457 aaKnown RBP12.51□□□□□ -0.41
TMEM116-213ENST00000550831 A2ML1A8K2U0 1454 aa12.51□□□□□ -0.41
TMEM116-213ENST00000550831 CENPJQ9HC77 1338 aaPredicted RBP12.5□□□□□ -0.41
TMEM116-213ENST00000550831 ASXL1Q8IXJ9 1541 aa12.5□□□□□ -0.41
TMEM116-213ENST00000550831 PANK3Q9H999 370 aa12.5□□□□□ -0.41
TMEM116-213ENST00000550831 ZBED9Q6R2W3 1325 aa12.49□□□□□ -0.41
TMEM116-213ENST00000550831 NLRP13Q86W25 1043 aa12.49□□□□□ -0.41
TMEM116-213ENST00000550831 PNISRQ8TF01 805 aaKnown RBP12.49□□□□□ -0.41
TMEM116-213ENST00000550831 ZNF142P52746 1687 aaPredicted RBP12.48□□□□□ -0.41
TMEM116-213ENST00000550831 FBXO31Q5XUX0 539 aaPredicted RBP12.48□□□□□ -0.41
TMEM116-213ENST00000550831 ZMYM3Q14202 1370 aa12.48□□□□□ -0.41
TMEM116-213ENST00000550831 SETD1AO15047 1707 aaKnown RBP12.47□□□□□ -0.41
TMEM116-213ENST00000550831 HNRNPUQ00839 825 aaKnown RBP eCLIP12.47□□□□□ -0.41
TMEM116-213ENST00000550831 ALKQ9UM73 1620 aa12.47□□□□□ -0.41
TMEM116-213ENST00000550831 DLC1Q96QB1 1528 aa12.46□□□□□ -0.41
TMEM116-213ENST00000550831 USP32Q8NFA0 1604 aa12.46□□□□□ -0.41
TMEM116-213ENST00000550831 AMER1Q5JTC6 1135 aaPredicted RBP12.45□□□□□ -0.42
TMEM116-213ENST00000550831 TMC1Q8TDI8 760 aa12.45□□□□□ -0.42
TMEM116-213ENST00000550831 KNSTRNQ9Y448 316 aa12.44□□□□□ -0.42
TMEM116-213ENST00000550831 CEP170BQ9Y4F5 1589 aaPredicted RBP12.44□□□□□ -0.42
TMEM116-213ENST00000550831 TULP4Q9NRJ4 1543 aa12.43□□□□□ -0.42
TMEM116-213ENST00000550831 RIMS2Q9UQ26 1411 aa12.43□□□□□ -0.42
TMEM116-213ENST00000550831 NINLQ9Y2I6 1382 aa12.43□□□□□ -0.42
TMEM116-213ENST00000550831 FAM9BQ8IZU0 186 aa12.43□□□□□ -0.42
TMEM116-213ENST00000550831 NRXN3Q9Y4C0 1643 aa12.43□□□□□ -0.42
TMEM116-213ENST00000550831 YTHDC2Q9H6S0 1430 aaKnown RBP12.42□□□□□ -0.42
TMEM116-213ENST00000550831 NLRP1Q9C000 1473 aa12.42□□□□□ -0.42
TMEM116-213ENST00000550831 TNRQ92752 1358 aa12.42□□□□□ -0.42
TMEM116-213ENST00000550831 UBR1Q8IWV7 1749 aa12.42□□□□□ -0.42
TMEM116-213ENST00000550831 FKBP8Q14318 412 aa12.42□□□□□ -0.42
TMEM116-213ENST00000550831 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.42□□□□□ -0.42
TMEM116-213ENST00000550831 TRAK1Q9UPV9 953 aa12.42□□□□□ -0.42
TMEM116-213ENST00000550831 TMEM132EQ6IEE7 984 aa12.41□□□□□ -0.42
TMEM116-213ENST00000550831 ZNF335Q9H4Z2 1342 aaPredicted RBP12.41□□□□□ -0.42
TMEM116-213ENST00000550831 KNDC1Q76NI1 1749 aa12.41□□□□□ -0.42
TMEM116-213ENST00000550831 EVC2Q86UK5 1308 aa12.4□□□□□ -0.42
TMEM116-213ENST00000550831 NCKAP5LQ9HCH0 1330 aa12.4□□□□□ -0.42
TMEM116-213ENST00000550831 ABCC11Q96J66 1382 aa12.4□□□□□ -0.43
TMEM116-213ENST00000550831 BLMP54132 1417 aaPredicted RBP12.39□□□□□ -0.43
TMEM116-213ENST00000550831 UBAP1LF5GYI3 381 aa12.39□□□□□ -0.43
TMEM116-213ENST00000550831 HDGFP51858 240 aaKnown RBP12.39□□□□□ -0.43
TMEM116-213ENST00000550831 SIRT1Q96EB6 747 aa12.38□□□□□ -0.43
TMEM116-213ENST00000550831 SUPT16HQ9Y5B9 1047 aaKnown RBP12.38□□□□□ -0.43
TMEM116-213ENST00000550831 TECPR2O15040 1411 aa12.38□□□□□ -0.43
TMEM116-213ENST00000550831 SMG6Q86US8 1419 aaKnown RBP12.38□□□□□ -0.43
TMEM116-213ENST00000550831 CC2D1BQ5T0F9 858 aaKnown RBP12.37□□□□□ -0.43
TMEM116-213ENST00000550831 STAG3Q9UJ98 1225 aa12.37□□□□□ -0.43
TMEM116-213ENST00000550831 NSD2O96028 1365 aa12.36□□□□□ -0.43
TMEM116-213ENST00000550831 ANKRD36BQ8N2N9 1353 aa12.36□□□□□ -0.43
TMEM116-213ENST00000550831 TMEM2Q9UHN6 1383 aa12.36□□□□□ -0.43
TMEM116-213ENST00000550831 SLIT1O75093 1534 aa12.36□□□□□ -0.43
TMEM116-213ENST00000550831 PPP2R1AP30153 589 aa12.36□□□□□ -0.43
TMEM116-213ENST00000550831 ERICH6BQ5W0A0 696 aa12.36□□□□□ -0.43
TMEM116-213ENST00000550831 CARD14Q9BXL6 1004 aa12.36□□□□□ -0.43
TMEM116-213ENST00000550831 ATAD2Q6PL18 1390 aa12.35□□□□□ -0.43
TMEM116-213ENST00000550831 FAM135BQ49AJ0 1406 aa12.35□□□□□ -0.43
TMEM116-213ENST00000550831 ARHGAP23Q9P227 1491 aa12.35□□□□□ -0.43
TMEM116-213ENST00000550831 CPS1P31327 1500 aa12.35□□□□□ -0.43
TMEM116-213ENST00000550831 NUTM2DQ5VT03 806 aaPredicted RBP12.35□□□□□ -0.43
TMEM116-213ENST00000550831 MED1Q15648 1581 aaPredicted RBP12.34□□□□□ -0.43
TMEM116-213ENST00000550831 SPDYE4A6NLX3 237 aa12.34□□□□□ -0.43
TMEM116-213ENST00000550831 PDE3BQ13370 1112 aa12.33□□□□□ -0.44
TMEM116-213ENST00000550831 MED14O60244 1454 aa12.33□□□□□ -0.44
TMEM116-213ENST00000550831 NSD3Q9BZ95 1437 aa12.32□□□□□ -0.44
TMEM116-213ENST00000550831 PLEKHG1Q9ULL1 1385 aa12.32□□□□□ -0.44
TMEM116-213ENST00000550831 POLR3AO14802 1390 aaPredicted RBP12.31□□□□□ -0.44
TMEM116-213ENST00000550831 NEFLP07196 543 aa12.31□□□□□ -0.44
TMEM116-213ENST00000550831 NUDCQ9Y266 331 aa12.31□□□□□ -0.44
TMEM116-213ENST00000550831 ANKRD26Q9UPS8 1709 aa12.31□□□□□ -0.44
TMEM116-213ENST00000550831 ADAMTS13Q76LX8 1427 aa12.3□□□□□ -0.44
TMEM116-213ENST00000550831 RNF123Q5XPI4 1314 aa12.3□□□□□ -0.44
TMEM116-213ENST00000550831 PRAM1Q96QH2 718 aa12.3□□□□□ -0.44
TMEM116-213ENST00000550831 SLC12A5Q9H2X9 1139 aa12.3□□□□□ -0.44
TMEM116-213ENST00000550831 DIP2AQ14689 1571 aa12.3□□□□□ -0.44
TMEM116-213ENST00000550831 CD163L1Q9NR16 1453 aa12.3□□□□□ -0.44
TMEM116-213ENST00000550831 CGNL1Q0VF96 1302 aa12.29□□□□□ -0.44
TMEM116-213ENST00000550831 CNGB1Q14028 1251 aaPredicted RBP12.29□□□□□ -0.44
TMEM116-213ENST00000550831 ADGRB2O60241 1585 aa12.29□□□□□ -0.44
TMEM116-213ENST00000550831 ATP7BP35670 1465 aa12.29□□□□□ -0.44
TMEM116-213ENST00000550831 SPDYE2BA6NHP3 402 aa12.28□□□□□ -0.44
TMEM116-213ENST00000550831 SPDYE6P0CI01 402 aa12.28□□□□□ -0.44
TMEM116-213ENST00000550831 SPDYE2Q495Y8 402 aa12.28□□□□□ -0.44
TMEM116-213ENST00000550831 METP08581 1390 aa12.28□□□□□ -0.44
TMEM116-213ENST00000550831 TOM1O60784 492 aa12.28□□□□□ -0.44
TMEM116-213ENST00000550831 NGEFQ8N5V2 710 aa12.28□□□□□ -0.44
TMEM116-213ENST00000550831 POGKQ9P215 609 aa12.28□□□□□ -0.44
TMEM116-213ENST00000550831 HSPA1LP34931 641 aa12.27□□□□□ -0.45
TMEM116-213ENST00000550831 STK26Q9P289 416 aa12.27□□□□□ -0.45
TMEM116-213ENST00000550831 A0A1W2PP64 1363 aa12.26□□□□□ -0.45
TMEM116-213ENST00000550831 SHPRHQ149N8 1683 aa12.26□□□□□ -0.45
TMEM116-213ENST00000550831 CABP2Q9NPB3 220 aa12.26□□□□□ -0.45
TMEM116-213ENST00000550831 TERF2IPQ9NYB0 399 aa12.26□□□□□ -0.45
TMEM116-213ENST00000550831 PIP4K2BP78356 416 aa12.25□□□□□ -0.45
TMEM116-213ENST00000550831 ADAMTS8Q9UP79 889 aa12.25□□□□□ -0.45
TMEM116-213ENST00000550831 SRPK2P78362 688 aaKnown RBP12.24□□□□□ -0.45
TMEM116-213ENST00000550831 CDK19Q9BWU1 502 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms