RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 NINLQ9Y2I6 1382 aa17.2■□□□□ 0.34
CACNB3-217ENST00000550483 TECPR2O15040 1411 aa17.2■□□□□ 0.34
CACNB3-217ENST00000550483 RALBP1Q15311 655 aa17.19■□□□□ 0.34
CACNB3-217ENST00000550483 FAM135BQ49AJ0 1406 aa17.19■□□□□ 0.34
CACNB3-217ENST00000550483 KNDC1Q76NI1 1749 aa17.18■□□□□ 0.34
CACNB3-217ENST00000550483 TXNDC2Q86VQ3 553 aa17.17■□□□□ 0.34
CACNB3-217ENST00000550483 RGS17Q9UGC6 210 aaPredicted RBP17.17■□□□□ 0.34
CACNB3-217ENST00000550483 NPC1L1Q9UHC9 1359 aa17.16■□□□□ 0.34
CACNB3-217ENST00000550483 CPS1P31327 1500 aa17.16■□□□□ 0.34
CACNB3-217ENST00000550483 ADAMTS13Q76LX8 1427 aa17.15■□□□□ 0.34
CACNB3-217ENST00000550483 POGKQ9P215 609 aa17.15■□□□□ 0.34
CACNB3-217ENST00000550483 MED14O60244 1454 aa17.15■□□□□ 0.34
CACNB3-217ENST00000550483 ATAD2Q6PL18 1390 aa17.15■□□□□ 0.34
CACNB3-217ENST00000550483 PIK3R4Q99570 1358 aa17.15■□□□□ 0.34
CACNB3-217ENST00000550483 PER1O15534 1290 aaPredicted RBP17.14■□□□□ 0.33
CACNB3-217ENST00000550483 PANK3Q9H999 370 aa17.14■□□□□ 0.33
CACNB3-217ENST00000550483 TBX22Q9Y458 520 aa17.14■□□□□ 0.33
CACNB3-217ENST00000550483 MYOM1P52179 1685 aa17.13■□□□□ 0.33
CACNB3-217ENST00000550483 ANKLE2Q86XL3 938 aa17.12■□□□□ 0.33
CACNB3-217ENST00000550483 BCANQ96GW7 911 aa17.12■□□□□ 0.33
CACNB3-217ENST00000550483 PRAM1Q96QH2 718 aa17.12■□□□□ 0.33
CACNB3-217ENST00000550483 STK26Q9P289 416 aa17.12■□□□□ 0.33
CACNB3-217ENST00000550483 KNSTRNQ9Y448 316 aa17.12■□□□□ 0.33
CACNB3-217ENST00000550483 PARD3Q8TEW0 1356 aa17.12■□□□□ 0.33
CACNB3-217ENST00000550483 TULP4Q9NRJ4 1543 aa17.11■□□□□ 0.33
CACNB3-217ENST00000550483 LTKP29376 864 aa17.11■□□□□ 0.33
CACNB3-217ENST00000550483 MYBBP1AQ9BQG0 1328 aaKnown RBP17.11■□□□□ 0.33
CACNB3-217ENST00000550483 METP08581 1390 aa17.11■□□□□ 0.33
CACNB3-217ENST00000550483 BRD4O60885 1362 aaPredicted RBP17.09■□□□□ 0.33
CACNB3-217ENST00000550483 PTCH1Q13635 1447 aa17.08■□□□□ 0.32
CACNB3-217ENST00000550483 ANKRD36BQ8N2N9 1353 aa17.06■□□□□ 0.32
CACNB3-217ENST00000550483 MRS2Q9HD23 443 aa17.06■□□□□ 0.32
CACNB3-217ENST00000550483 USP32Q8NFA0 1604 aa17.06■□□□□ 0.32
CACNB3-217ENST00000550483 POTEAQ6S8J7 498 aa17.05■□□□□ 0.32
CACNB3-217ENST00000550483 NLRP13Q86W25 1043 aa17.05■□□□□ 0.32
CACNB3-217ENST00000550483 YTHDC1Q96MU7 727 aaKnown RBP17.05■□□□□ 0.32
CACNB3-217ENST00000550483 ADGRB2O60241 1585 aa17.05■□□□□ 0.32
CACNB3-217ENST00000550483 NSD2O96028 1365 aa17.04■□□□□ 0.32
CACNB3-217ENST00000550483 SRPK2P78362 688 aaKnown RBP17.04■□□□□ 0.32
CACNB3-217ENST00000550483 AMER1Q5JTC6 1135 aaPredicted RBP17.03■□□□□ 0.32
CACNB3-217ENST00000550483 NPHP4O75161 1426 aaPredicted RBP17.03■□□□□ 0.32
CACNB3-217ENST00000550483 MINK1Q8N4C8 1332 aaPredicted RBP17.02■□□□□ 0.32
CACNB3-217ENST00000550483 TERF2IPQ9NYB0 399 aa17.02■□□□□ 0.32
CACNB3-217ENST00000550483 TMC1Q8TDI8 760 aa17.01■□□□□ 0.31
CACNB3-217ENST00000550483 ATP7BP35670 1465 aa17■□□□□ 0.31
CACNB3-217ENST00000550483 SAFB2Q14151 953 aaKnown RBP eCLIP17■□□□□ 0.31
CACNB3-217ENST00000550483 XRN1Q8IZH2 1706 aaKnown RBP17■□□□□ 0.31
CACNB3-217ENST00000550483 LRRC7Q96NW7 1537 aa17■□□□□ 0.31
CACNB3-217ENST00000550483 INSRP06213 1382 aa17■□□□□ 0.31
CACNB3-217ENST00000550483 CGNL1Q0VF96 1302 aa16.99■□□□□ 0.31
CACNB3-217ENST00000550483 WASLO00401 505 aaPredicted RBP16.99■□□□□ 0.31
CACNB3-217ENST00000550483 CDK19Q9BWU1 502 aa16.99■□□□□ 0.31
CACNB3-217ENST00000550483 ROBO2Q9HCK4 1378 aa16.99■□□□□ 0.31
CACNB3-217ENST00000550483 NSD3Q9BZ95 1437 aa16.98■□□□□ 0.31
CACNB3-217ENST00000550483 STRCP1A6NGW2 1772 aa16.98■□□□□ 0.31
CACNB3-217ENST00000550483 HDGFL2Q7Z4V5 671 aaPredicted RBP16.98■□□□□ 0.31
CACNB3-217ENST00000550483 SLC26A8Q96RN1 970 aa16.98■□□□□ 0.31
CACNB3-217ENST00000550483 CABP2Q9NPB3 220 aa16.98■□□□□ 0.31
CACNB3-217ENST00000550483 AMOTL2Q9Y2J4 779 aa16.98■□□□□ 0.31
CACNB3-217ENST00000550483 PLEKHH1Q9ULM0 1364 aa16.98■□□□□ 0.31
CACNB3-217ENST00000550483 PTPRUQ92729 1446 aa16.97■□□□□ 0.31
CACNB3-217ENST00000550483 CC2D1BQ5T0F9 858 aaKnown RBP16.97■□□□□ 0.31
CACNB3-217ENST00000550483 WAPLQ7Z5K2 1190 aa16.97■□□□□ 0.31
CACNB3-217ENST00000550483 SLC12A5Q9H2X9 1139 aa16.97■□□□□ 0.31
CACNB3-217ENST00000550483 CARD14Q9BXL6 1004 aa16.95■□□□□ 0.3
CACNB3-217ENST00000550483 CCDC61Q9Y6R9 512 aa16.93■□□□□ 0.3
CACNB3-217ENST00000550483 A0A1W2PP64 1363 aa16.92■□□□□ 0.3
CACNB3-217ENST00000550483 PNISRQ8TF01 805 aaKnown RBP16.92■□□□□ 0.3
CACNB3-217ENST00000550483 ANKARQ7Z5J8 1434 aa16.91■□□□□ 0.3
CACNB3-217ENST00000550483 NWD1Q149M9 1564 aa16.9■□□□□ 0.3
CACNB3-217ENST00000550483 PPIP5K1Q6PFW1 1433 aa16.9■□□□□ 0.3
CACNB3-217ENST00000550483 PPP2R1AP30153 589 aa16.9■□□□□ 0.3
CACNB3-217ENST00000550483 CCDC184Q52MB2 194 aa16.9■□□□□ 0.3
CACNB3-217ENST00000550483 ZNF692Q9BU19 519 aaPredicted RBP16.9■□□□□ 0.3
CACNB3-217ENST00000550483 CD163L1Q9NR16 1453 aa16.9■□□□□ 0.3
CACNB3-217ENST00000550483 CDC42BPGQ6DT37 1551 aa16.89■□□□□ 0.3
CACNB3-217ENST00000550483 CHD2O14647 1828 aaKnown RBP16.89■□□□□ 0.29
CACNB3-217ENST00000550483 FAM9BQ8IZU0 186 aa16.89■□□□□ 0.29
CACNB3-217ENST00000550483 NUDT16Q96DE0 195 aaKnown RBP16.89■□□□□ 0.29
CACNB3-217ENST00000550483 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.89■□□□□ 0.29
CACNB3-217ENST00000550483 CPSF1Q10570 1443 aaKnown RBP16.88■□□□□ 0.29
CACNB3-217ENST00000550483 EDC4Q6P2E9 1401 aaKnown RBP16.88■□□□□ 0.29
CACNB3-217ENST00000550483 KCNA6P17658 529 aa16.88■□□□□ 0.29
CACNB3-217ENST00000550483 CNGB1Q14028 1251 aaPredicted RBP16.88■□□□□ 0.29
CACNB3-217ENST00000550483 MORC1Q86VD1 984 aa16.88■□□□□ 0.29
CACNB3-217ENST00000550483 RBM33Q96EV2 1170 aaKnown RBP16.88■□□□□ 0.29
CACNB3-217ENST00000550483 CABP1Q9NZU7 370 aa16.88■□□□□ 0.29
CACNB3-217ENST00000550483 NKTRP30414 1462 aaKnown RBP16.87■□□□□ 0.29
CACNB3-217ENST00000550483 HNRNPUQ00839 825 aaKnown RBP eCLIP16.87■□□□□ 0.29
CACNB3-217ENST00000550483 TOPAZ1Q8N9V7 1692 aa16.87■□□□□ 0.29
CACNB3-217ENST00000550483 SRCAPQ6ZRS2 3230 aa16.86■□□□□ 0.29
CACNB3-217ENST00000550483 PLEKHG3A1L390 1219 aa16.86■□□□□ 0.29
CACNB3-217ENST00000550483 ITSN1Q15811 1721 aa16.86■□□□□ 0.29
CACNB3-217ENST00000550483 ZBED9Q6R2W3 1325 aa16.86■□□□□ 0.29
CACNB3-217ENST00000550483 POLR3AO14802 1390 aaPredicted RBP16.86■□□□□ 0.29
CACNB3-217ENST00000550483 ANKRD26Q9UPS8 1709 aa16.84■□□□□ 0.29
CACNB3-217ENST00000550483 NCOA3Q9Y6Q9 1424 aa16.84■□□□□ 0.29
CACNB3-217ENST00000550483 ADGRL3Q9HAR2 1447 aa16.83■□□□□ 0.28
CACNB3-217ENST00000550483 MON2Q7Z3U7 1717 aa16.82■□□□□ 0.28
CACNB3-217ENST00000550483 CFAP53Q96M91 514 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms