RNA–Protein interactions for RNA: ENST00000550168.5

CACNB3-214, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 677 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-214ENST00000550168 TRAK1Q9UPV9 953 aa17.23■□□□□ 0.35
CACNB3-214ENST00000550168 CEP170BQ9Y4F5 1589 aaPredicted RBP17.23■□□□□ 0.35
CACNB3-214ENST00000550168 ZNF142P52746 1687 aaPredicted RBP17.23■□□□□ 0.35
CACNB3-214ENST00000550168 ABCC11Q96J66 1382 aa17.22■□□□□ 0.35
CACNB3-214ENST00000550168 DIP2AQ14689 1571 aa17.22■□□□□ 0.35
CACNB3-214ENST00000550168 TMEM132EQ6IEE7 984 aa17.21■□□□□ 0.35
CACNB3-214ENST00000550168 NRXN3Q9Y4C0 1643 aa17.21■□□□□ 0.35
CACNB3-214ENST00000550168 LRRC7Q96NW7 1537 aa17.21■□□□□ 0.34
CACNB3-214ENST00000550168 EVC2Q86UK5 1308 aa17.21■□□□□ 0.34
CACNB3-214ENST00000550168 NINLQ9Y2I6 1382 aa17.2■□□□□ 0.34
CACNB3-214ENST00000550168 TECPR2O15040 1411 aa17.2■□□□□ 0.34
CACNB3-214ENST00000550168 RALBP1Q15311 655 aa17.19■□□□□ 0.34
CACNB3-214ENST00000550168 FAM135BQ49AJ0 1406 aa17.19■□□□□ 0.34
CACNB3-214ENST00000550168 KNDC1Q76NI1 1749 aa17.18■□□□□ 0.34
CACNB3-214ENST00000550168 TXNDC2Q86VQ3 553 aa17.17■□□□□ 0.34
CACNB3-214ENST00000550168 NPC1L1Q9UHC9 1359 aa17.16■□□□□ 0.34
CACNB3-214ENST00000550168 ADAMTS13Q76LX8 1427 aa17.15■□□□□ 0.34
CACNB3-214ENST00000550168 POGKQ9P215 609 aa17.15■□□□□ 0.34
CACNB3-214ENST00000550168 MED14O60244 1454 aa17.15■□□□□ 0.34
CACNB3-214ENST00000550168 ATAD2Q6PL18 1390 aa17.15■□□□□ 0.34
CACNB3-214ENST00000550168 PIK3R4Q99570 1358 aa17.15■□□□□ 0.34
CACNB3-214ENST00000550168 PER1O15534 1290 aaPredicted RBP17.14■□□□□ 0.33
CACNB3-214ENST00000550168 ZNF772Q68DY9 489 aaPredicted RBP17.14■□□□□ 0.33
CACNB3-214ENST00000550168 PANK3Q9H999 370 aa17.14■□□□□ 0.33
CACNB3-214ENST00000550168 TBX22Q9Y458 520 aa17.14■□□□□ 0.33
CACNB3-214ENST00000550168 MYOM1P52179 1685 aa17.13■□□□□ 0.33
CACNB3-214ENST00000550168 BCANQ96GW7 911 aa17.12■□□□□ 0.33
CACNB3-214ENST00000550168 PRAM1Q96QH2 718 aa17.12■□□□□ 0.33
CACNB3-214ENST00000550168 STK26Q9P289 416 aa17.12■□□□□ 0.33
CACNB3-214ENST00000550168 KNSTRNQ9Y448 316 aa17.12■□□□□ 0.33
CACNB3-214ENST00000550168 PARD3Q8TEW0 1356 aa17.12■□□□□ 0.33
CACNB3-214ENST00000550168 CDK12Q9NYV4 1490 aaPredicted RBP17.12■□□□□ 0.33
CACNB3-214ENST00000550168 TULP4Q9NRJ4 1543 aa17.11■□□□□ 0.33
CACNB3-214ENST00000550168 RXRBP28702 533 aa17.11■□□□□ 0.33
CACNB3-214ENST00000550168 LTKP29376 864 aa17.11■□□□□ 0.33
CACNB3-214ENST00000550168 MYBBP1AQ9BQG0 1328 aaKnown RBP17.11■□□□□ 0.33
CACNB3-214ENST00000550168 METP08581 1390 aa17.11■□□□□ 0.33
CACNB3-214ENST00000550168 YY1P25490 414 aa17.09■□□□□ 0.33
CACNB3-214ENST00000550168 ANKLE2Q86XL3 938 aa17.09■□□□□ 0.33
CACNB3-214ENST00000550168 BRD4O60885 1362 aaPredicted RBP17.09■□□□□ 0.33
CACNB3-214ENST00000550168 PTCH1Q13635 1447 aa17.08■□□□□ 0.32
CACNB3-214ENST00000550168 ANKRD36BQ8N2N9 1353 aa17.06■□□□□ 0.32
CACNB3-214ENST00000550168 MRS2Q9HD23 443 aa17.06■□□□□ 0.32
CACNB3-214ENST00000550168 USP32Q8NFA0 1604 aa17.06■□□□□ 0.32
CACNB3-214ENST00000550168 NLRP13Q86W25 1043 aa17.05■□□□□ 0.32
CACNB3-214ENST00000550168 YTHDC1Q96MU7 727 aaKnown RBP17.05■□□□□ 0.32
CACNB3-214ENST00000550168 ADGRB2O60241 1585 aa17.05■□□□□ 0.32
CACNB3-214ENST00000550168 NSD2O96028 1365 aa17.04■□□□□ 0.32
CACNB3-214ENST00000550168 LRP5O75197 1615 aa17.04■□□□□ 0.32
CACNB3-214ENST00000550168 SRPK2P78362 688 aaKnown RBP17.04■□□□□ 0.32
CACNB3-214ENST00000550168 AMER1Q5JTC6 1135 aaPredicted RBP17.03■□□□□ 0.32
CACNB3-214ENST00000550168 MINK1Q8N4C8 1332 aaPredicted RBP17.02■□□□□ 0.32
CACNB3-214ENST00000550168 SENP3-EIF4A1A0A087X0R7 540 aa17.02■□□□□ 0.32
CACNB3-214ENST00000550168 TERF2IPQ9NYB0 399 aa17.02■□□□□ 0.32
CACNB3-214ENST00000550168 TMC1Q8TDI8 760 aa17.01■□□□□ 0.31
CACNB3-214ENST00000550168 ATP7BP35670 1465 aa17■□□□□ 0.31
CACNB3-214ENST00000550168 SAFB2Q14151 953 aaKnown RBP eCLIP17■□□□□ 0.31
CACNB3-214ENST00000550168 XRN1Q8IZH2 1706 aaKnown RBP17■□□□□ 0.31
CACNB3-214ENST00000550168 INSRP06213 1382 aa17■□□□□ 0.31
CACNB3-214ENST00000550168 CGNL1Q0VF96 1302 aa16.99■□□□□ 0.31
CACNB3-214ENST00000550168 NPHP4O75161 1426 aaPredicted RBP16.99■□□□□ 0.31
CACNB3-214ENST00000550168 WASLO00401 505 aaPredicted RBP16.99■□□□□ 0.31
CACNB3-214ENST00000550168 CDK19Q9BWU1 502 aa16.99■□□□□ 0.31
CACNB3-214ENST00000550168 ROBO2Q9HCK4 1378 aa16.99■□□□□ 0.31
CACNB3-214ENST00000550168 NSD3Q9BZ95 1437 aa16.98■□□□□ 0.31
CACNB3-214ENST00000550168 HDGFL2Q7Z4V5 671 aaPredicted RBP16.98■□□□□ 0.31
CACNB3-214ENST00000550168 SLC26A8Q96RN1 970 aa16.98■□□□□ 0.31
CACNB3-214ENST00000550168 CABP2Q9NPB3 220 aa16.98■□□□□ 0.31
CACNB3-214ENST00000550168 AMOTL2Q9Y2J4 779 aa16.98■□□□□ 0.31
CACNB3-214ENST00000550168 PLEKHH1Q9ULM0 1364 aa16.98■□□□□ 0.31
CACNB3-214ENST00000550168 PTPRUQ92729 1446 aa16.97■□□□□ 0.31
CACNB3-214ENST00000550168 CC2D1BQ5T0F9 858 aaKnown RBP16.97■□□□□ 0.31
CACNB3-214ENST00000550168 WAPLQ7Z5K2 1190 aa16.97■□□□□ 0.31
CACNB3-214ENST00000550168 SLC12A5Q9H2X9 1139 aa16.97■□□□□ 0.31
CACNB3-214ENST00000550168 JCADQ9P266 1359 aa16.95■□□□□ 0.3
CACNB3-214ENST00000550168 NUTM2BA6NNL0 878 aaPredicted RBP16.95■□□□□ 0.3
CACNB3-214ENST00000550168 NUTM2EB1AL46 878 aaPredicted RBP16.95■□□□□ 0.3
CACNB3-214ENST00000550168 MEX3CQ5U5Q3 659 aaKnown RBP16.95■□□□□ 0.3
CACNB3-214ENST00000550168 NUTM2AQ8IVF1 878 aaPredicted RBP16.95■□□□□ 0.3
CACNB3-214ENST00000550168 CARD14Q9BXL6 1004 aa16.95■□□□□ 0.3
CACNB3-214ENST00000550168 STRCP1A6NGW2 1772 aa16.94■□□□□ 0.3
CACNB3-214ENST00000550168 CCDC61Q9Y6R9 512 aa16.93■□□□□ 0.3
CACNB3-214ENST00000550168 A0A1W2PP64 1363 aa16.92■□□□□ 0.3
CACNB3-214ENST00000550168 PNISRQ8TF01 805 aaKnown RBP16.92■□□□□ 0.3
CACNB3-214ENST00000550168 ANKARQ7Z5J8 1434 aa16.91■□□□□ 0.3
CACNB3-214ENST00000550168 NWD1Q149M9 1564 aa16.9■□□□□ 0.3
CACNB3-214ENST00000550168 PPIP5K1Q6PFW1 1433 aa16.9■□□□□ 0.3
CACNB3-214ENST00000550168 PPP2R1AP30153 589 aa16.9■□□□□ 0.3
CACNB3-214ENST00000550168 CCDC184Q52MB2 194 aa16.9■□□□□ 0.3
CACNB3-214ENST00000550168 ZNF692Q9BU19 519 aaPredicted RBP16.9■□□□□ 0.3
CACNB3-214ENST00000550168 CD163L1Q9NR16 1453 aa16.9■□□□□ 0.3
CACNB3-214ENST00000550168 CDC42BPGQ6DT37 1551 aa16.89■□□□□ 0.3
CACNB3-214ENST00000550168 CHD2O14647 1828 aaKnown RBP16.89■□□□□ 0.29
CACNB3-214ENST00000550168 RGS12O14924 1447 aa16.89■□□□□ 0.29
CACNB3-214ENST00000550168 FAM9BQ8IZU0 186 aa16.89■□□□□ 0.29
CACNB3-214ENST00000550168 NUDT16Q96DE0 195 aaKnown RBP16.89■□□□□ 0.29
CACNB3-214ENST00000550168 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.89■□□□□ 0.29
CACNB3-214ENST00000550168 LRP6O75581 1613 aa16.88■□□□□ 0.29
CACNB3-214ENST00000550168 CPSF1Q10570 1443 aaKnown RBP16.88■□□□□ 0.29
CACNB3-214ENST00000550168 EDC4Q6P2E9 1401 aaKnown RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms