RNA–Protein interactions for RNA: ENST00000550160.5

CNOT2-223, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-223ENST00000550160 PTCH1Q13635 1447 aa16.18■□□□□ 0.18
CNOT2-223ENST00000550160 ZBTB22O15209 634 aa16.17■□□□□ 0.18
CNOT2-223ENST00000550160 PTPRUQ92729 1446 aa16.17■□□□□ 0.18
CNOT2-223ENST00000550160 QRICH2Q9H0J4 1663 aa16.15■□□□□ 0.18
CNOT2-223ENST00000550160 KCNA6P17658 529 aa16.15■□□□□ 0.18
CNOT2-223ENST00000550160 CCDC7Q96M83 1385 aa16.14■□□□□ 0.17
CNOT2-223ENST00000550160 XRN1Q8IZH2 1706 aaKnown RBP16.14■□□□□ 0.17
CNOT2-223ENST00000550160 SAFB2Q14151 953 aaKnown RBP eCLIP16.14■□□□□ 0.17
CNOT2-223ENST00000550160 EVC2Q86UK5 1308 aa16.14■□□□□ 0.17
CNOT2-223ENST00000550160 ROBO2Q9HCK4 1378 aa16.13■□□□□ 0.17
CNOT2-223ENST00000550160 STRCQ7RTU9 1775 aa16.13■□□□□ 0.17
CNOT2-223ENST00000550160 KIF7Q2M1P5 1343 aa16.13■□□□□ 0.17
CNOT2-223ENST00000550160 WASHC2AQ641Q2 1341 aa16.13■□□□□ 0.17
CNOT2-223ENST00000550160 WAPLQ7Z5K2 1190 aa16.12■□□□□ 0.17
CNOT2-223ENST00000550160 POLR3GLQ9BT43 218 aa16.12■□□□□ 0.17
CNOT2-223ENST00000550160 MINK1Q8N4C8 1332 aaPredicted RBP16.12■□□□□ 0.17
CNOT2-223ENST00000550160 NWD1Q149M9 1564 aa16.12■□□□□ 0.17
CNOT2-223ENST00000550160 DISP3Q9P2K9 1392 aa16.12■□□□□ 0.17
CNOT2-223ENST00000550160 NKTRP30414 1462 aaKnown RBP16.11■□□□□ 0.17
CNOT2-223ENST00000550160 CHD2O14647 1828 aaKnown RBP16.11■□□□□ 0.17
CNOT2-223ENST00000550160 PLEKHH1Q9ULM0 1364 aa16.1■□□□□ 0.17
CNOT2-223ENST00000550160 C11orf95C9JLR9 678 aaPredicted RBP16.09■□□□□ 0.17
CNOT2-223ENST00000550160 PUS7Q96PZ0 661 aaKnown RBP16.09■□□□□ 0.17
CNOT2-223ENST00000550160 SRPK2P78362 688 aaKnown RBP16.07■□□□□ 0.16
CNOT2-223ENST00000550160 DDX10Q13206 875 aaKnown RBP16.06■□□□□ 0.16
CNOT2-223ENST00000550160 PROSER2Q86WR7 435 aaPredicted RBP16.06■□□□□ 0.16
CNOT2-223ENST00000550160 ADGRB2O60241 1585 aa16.05■□□□□ 0.16
CNOT2-223ENST00000550160 TULP4Q9NRJ4 1543 aa16.05■□□□□ 0.16
CNOT2-223ENST00000550160 ATAD2Q6PL18 1390 aa16.05■□□□□ 0.16
CNOT2-223ENST00000550160 C14orf37Q86TY3 774 aa16.05■□□□□ 0.16
CNOT2-223ENST00000550160 WASLO00401 505 aaPredicted RBP16.04■□□□□ 0.16
CNOT2-223ENST00000550160 NCOA3Q9Y6Q9 1424 aa16.03■□□□□ 0.16
CNOT2-223ENST00000550160 NINLQ9Y2I6 1382 aa16.03■□□□□ 0.16
CNOT2-223ENST00000550160 DIEXFQ68CQ4 756 aaKnown RBP16.03■□□□□ 0.16
CNOT2-223ENST00000550160 CDK19Q9BWU1 502 aa16.03■□□□□ 0.16
CNOT2-223ENST00000550160 ADGRL3Q9HAR2 1447 aa16.02■□□□□ 0.16
CNOT2-223ENST00000550160 CABP2Q9NPB3 220 aa16.02■□□□□ 0.16
CNOT2-223ENST00000550160 ZNF335Q9H4Z2 1342 aaPredicted RBP16.01■□□□□ 0.15
CNOT2-223ENST00000550160 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.01■□□□□ 0.15
CNOT2-223ENST00000550160 TMEM94Q12767 1356 aa16■□□□□ 0.15
CNOT2-223ENST00000550160 TMC1Q8TDI8 760 aa15.99■□□□□ 0.15
CNOT2-223ENST00000550160 CDC42BPGQ6DT37 1551 aa15.99■□□□□ 0.15
CNOT2-223ENST00000550160 ANKARQ7Z5J8 1434 aa15.97■□□□□ 0.15
CNOT2-223ENST00000550160 C19orf44Q9H6X5 657 aa15.97■□□□□ 0.15
CNOT2-223ENST00000550160 NALCNQ8IZF0 1738 aa15.97■□□□□ 0.15
CNOT2-223ENST00000550160 DCCP43146 1447 aa15.96■□□□□ 0.15
CNOT2-223ENST00000550160 STRCP1A6NGW2 1772 aa15.96■□□□□ 0.15
CNOT2-223ENST00000550160 NUDT16Q96DE0 195 aaKnown RBP15.96■□□□□ 0.15
CNOT2-223ENST00000550160 RBM33Q96EV2 1170 aaKnown RBP15.96■□□□□ 0.15
CNOT2-223ENST00000550160 CCDC61Q9Y6R9 512 aa15.96■□□□□ 0.15
CNOT2-223ENST00000550160 MSH6P52701 1360 aa15.96■□□□□ 0.15
CNOT2-223ENST00000550160 TERF2IPQ9NYB0 399 aa15.95■□□□□ 0.14
CNOT2-223ENST00000550160 LRRC7Q96NW7 1537 aa15.94■□□□□ 0.14
CNOT2-223ENST00000550160 ATF3P18847 181 aa15.94■□□□□ 0.14
CNOT2-223ENST00000550160 HDGFL2Q7Z4V5 671 aaPredicted RBP15.94■□□□□ 0.14
CNOT2-223ENST00000550160 PANK3Q9H999 370 aa15.94■□□□□ 0.14
CNOT2-223ENST00000550160 ATP7BP35670 1465 aa15.94■□□□□ 0.14
CNOT2-223ENST00000550160 MYOM1P52179 1685 aa15.94■□□□□ 0.14
CNOT2-223ENST00000550160 PPIP5K1Q6PFW1 1433 aa15.94■□□□□ 0.14
CNOT2-223ENST00000550160 SLC12A5Q9H2X9 1139 aa15.93■□□□□ 0.14
CNOT2-223ENST00000550160 FOXD4L1Q9NU39 408 aa15.93■□□□□ 0.14
CNOT2-223ENST00000550160 ANKRD36BQ8N2N9 1353 aa15.92■□□□□ 0.14
CNOT2-223ENST00000550160 FMN2Q9NZ56 1722 aa15.92■□□□□ 0.14
CNOT2-223ENST00000550160 CADPS2Q86UW7 1296 aa15.92■□□□□ 0.14
CNOT2-223ENST00000550160 CABP1Q9NZU7 370 aa15.92■□□□□ 0.14
CNOT2-223ENST00000550160 KNSTRNQ9Y448 316 aa15.92■□□□□ 0.14
CNOT2-223ENST00000550160 NUTM2FA1L443 756 aa15.91■□□□□ 0.14
CNOT2-223ENST00000550160 ANP32CO43423 234 aa15.91■□□□□ 0.14
CNOT2-223ENST00000550160 PRR36Q9H6K5 1346 aa15.91■□□□□ 0.14
CNOT2-223ENST00000550160 ITSN1Q15811 1721 aa15.9■□□□□ 0.14
CNOT2-223ENST00000550160 PLEKHG3A1L390 1219 aa15.88■□□□□ 0.13
CNOT2-223ENST00000550160 ZNF692Q9BU19 519 aaPredicted RBP15.88■□□□□ 0.13
CNOT2-223ENST00000550160 TOPAZ1Q8N9V7 1692 aa15.88■□□□□ 0.13
CNOT2-223ENST00000550160 A0A1W2PP64 1363 aa15.87■□□□□ 0.13
CNOT2-223ENST00000550160 LTBP4Q8N2S1 1624 aa15.86■□□□□ 0.13
CNOT2-223ENST00000550160 USP32Q8NFA0 1604 aa15.86■□□□□ 0.13
CNOT2-223ENST00000550160 NSD3Q9BZ95 1437 aa15.86■□□□□ 0.13
CNOT2-223ENST00000550160 PER1O15534 1290 aaPredicted RBP15.86■□□□□ 0.13
CNOT2-223ENST00000550160 SLC4A2P04920 1241 aa15.86■□□□□ 0.13
CNOT2-223ENST00000550160 NGDNQ8NEJ9 315 aaKnown RBP15.86■□□□□ 0.13
CNOT2-223ENST00000550160 CGNL1Q0VF96 1302 aa15.86■□□□□ 0.13
CNOT2-223ENST00000550160 KTN1Q86UP2 1357 aaKnown RBP15.86■□□□□ 0.13
CNOT2-223ENST00000550160 CPSF1Q10570 1443 aaKnown RBP15.85■□□□□ 0.13
CNOT2-223ENST00000550160 ESCO1Q5FWF5 840 aa15.85■□□□□ 0.13
CNOT2-223ENST00000550160 PHF8Q9UPP1 1060 aa15.85■□□□□ 0.13
CNOT2-223ENST00000550160 MST1RQ04912 1400 aa15.85■□□□□ 0.13
CNOT2-223ENST00000550160 C1orf167Q5SNV9 1468 aa15.84■□□□□ 0.13
CNOT2-223ENST00000550160 ACEP12821 1306 aa15.84■□□□□ 0.13
CNOT2-223ENST00000550160 XIRP1Q702N8 1843 aaKnown RBP15.84■□□□□ 0.13
CNOT2-223ENST00000550160 POLR3AO14802 1390 aaPredicted RBP15.84■□□□□ 0.13
CNOT2-223ENST00000550160 NPC1L1Q9UHC9 1359 aa15.84■□□□□ 0.13
CNOT2-223ENST00000550160 EDC4Q6P2E9 1401 aaKnown RBP15.84■□□□□ 0.13
CNOT2-223ENST00000550160 CD163L1Q9NR16 1453 aa15.84■□□□□ 0.13
CNOT2-223ENST00000550160 PMFBP1Q8TBY8 1022 aa15.83■□□□□ 0.12
CNOT2-223ENST00000550160 CARD14Q9BXL6 1004 aa15.83■□□□□ 0.12
CNOT2-223ENST00000550160 NSD2O96028 1365 aa15.83■□□□□ 0.12
CNOT2-223ENST00000550160 BRD4O60885 1362 aaPredicted RBP15.81■□□□□ 0.12
CNOT2-223ENST00000550160 USP6P35125 1406 aa15.81■□□□□ 0.12
CNOT2-223ENST00000550160 KIF1AQ12756 1690 aa15.81■□□□□ 0.12
CNOT2-223ENST00000550160 RALBP1Q15311 655 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms