RNA–Protein interactions for RNA: ENST00000550025.1

EIF4B-208, Transcript of eukaryotic translation initiation factor 4B, humanhuman

TSL 2

Gene EIF4B, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4B-208ENST00000550025 DIXDC1Q155Q3 683 aa9.7□□□□□ -0.86
EIF4B-208ENST00000550025 USB1Q9BQ65 265 aaKnown RBP9.7□□□□□ -0.86
EIF4B-208ENST00000550025 PRDM9Q9NQV7 894 aa9.7□□□□□ -0.86
EIF4B-208ENST00000550025 PLA2G2CQ5R387 149 aa9.69□□□□□ -0.86
EIF4B-208ENST00000550025 SPTLC1O15269 473 aa9.68□□□□□ -0.86
EIF4B-208ENST00000550025 SYMPKQ92797 1274 aaKnown RBP9.68□□□□□ -0.86
EIF4B-208ENST00000550025 GPBP1L1Q9HC44 474 aaPredicted RBP9.68□□□□□ -0.86
EIF4B-208ENST00000550025 DXOO77932 396 aaKnown RBP9.67□□□□□ -0.86
EIF4B-208ENST00000550025 RSBN1LQ6PCB5 846 aaPredicted RBP9.67□□□□□ -0.86
EIF4B-208ENST00000550025 LIAT1Q6ZQX7 453 aa9.67□□□□□ -0.86
EIF4B-208ENST00000550025 KDM4CQ9H3R0 1056 aa9.67□□□□□ -0.86
EIF4B-208ENST00000550025 RETREG3Q86VR2 466 aa9.66□□□□□ -0.86
EIF4B-208ENST00000550025 SLC19A1P41440 591 aa9.65□□□□□ -0.86
EIF4B-208ENST00000550025 MYSM1Q5VVJ2 828 aa9.65□□□□□ -0.86
EIF4B-208ENST00000550025 TUSC1Q2TAM9 212 aa9.64□□□□□ -0.87
EIF4B-208ENST00000550025 TPRNQ4KMQ1 711 aa9.64□□□□□ -0.87
EIF4B-208ENST00000550025 FCF1Q9Y324 198 aaKnown RBP9.64□□□□□ -0.87
EIF4B-208ENST00000550025 PCDHB15Q9Y5E8 787 aa9.64□□□□□ -0.87
EIF4B-208ENST00000550025 SPRYD7Q5W111 196 aa9.63□□□□□ -0.87
EIF4B-208ENST00000550025 RIC3Q7Z5B4 369 aa9.63□□□□□ -0.87
EIF4B-208ENST00000550025 FAM117AQ9C073 453 aa9.62□□□□□ -0.87
EIF4B-208ENST00000550025 PLEKHG3A1L390 1219 aa9.61□□□□□ -0.87
EIF4B-208ENST00000550025 SPDYE5A6NIY4 337 aa9.61□□□□□ -0.87
EIF4B-208ENST00000550025 C6orf229H3BNL8 230 aa9.61□□□□□ -0.87
EIF4B-208ENST00000550025 IRX2Q9BZI1 471 aaPredicted RBP9.61□□□□□ -0.87
EIF4B-208ENST00000550025 LIMD1Q9UGP4 676 aa9.61□□□□□ -0.87
EIF4B-208ENST00000550025 JUNDP17535 347 aa9.6□□□□□ -0.87
EIF4B-208ENST00000550025 RPIAP49247 311 aa9.6□□□□□ -0.87
EIF4B-208ENST00000550025 MTMR2Q13614 643 aa9.6□□□□□ -0.87
EIF4B-208ENST00000550025 PRPF38BQ5VTL8 546 aaKnown RBP9.6□□□□□ -0.87
EIF4B-208ENST00000550025 ZNF598Q86UK7 904 aaKnown RBP9.6□□□□□ -0.87
EIF4B-208ENST00000550025 HRCP23327 699 aa9.59□□□□□ -0.87
EIF4B-208ENST00000550025 TRIM67Q6ZTA4 783 aa9.59□□□□□ -0.87
EIF4B-208ENST00000550025 RSPH6AQ9H0K4 717 aa9.59□□□□□ -0.87
EIF4B-208ENST00000550025 DESI1Q6ICB0 168 aa9.58□□□□□ -0.88
EIF4B-208ENST00000550025 DDRGK1Q96HY6 314 aa9.58□□□□□ -0.88
EIF4B-208ENST00000550025 LILRB3O75022 631 aa9.57□□□□□ -0.88
EIF4B-208ENST00000550025 PRR7Q8TB68 274 aa9.57□□□□□ -0.88
EIF4B-208ENST00000550025 BRPF1P55201 1214 aaPredicted RBP9.56□□□□□ -0.88
EIF4B-208ENST00000550025 QPCTQ16769 361 aa9.56□□□□□ -0.88
EIF4B-208ENST00000550025 ZBTB3Q9H5J0 574 aa9.56□□□□□ -0.88
EIF4B-208ENST00000550025 CFAP99D6REC4 459 aa9.55□□□□□ -0.88
EIF4B-208ENST00000550025 CLK2P49760 499 aaKnown RBP9.55□□□□□ -0.88
EIF4B-208ENST00000550025 SH3D19Q5HYK7 790 aa9.55□□□□□ -0.88
EIF4B-208ENST00000550025 CABLES1Q8TDN4 633 aa9.55□□□□□ -0.88
EIF4B-208ENST00000550025 GDF9O60383 454 aa9.54□□□□□ -0.88
EIF4B-208ENST00000550025 PRR20EP86478 221 aa9.54□□□□□ -0.88
EIF4B-208ENST00000550025 PRR20CP86479 221 aa9.54□□□□□ -0.88
EIF4B-208ENST00000550025 PRR20DP86480 221 aa9.54□□□□□ -0.88
EIF4B-208ENST00000550025 PRR20BP86481 221 aa9.54□□□□□ -0.88
EIF4B-208ENST00000550025 PRR20AP86496 221 aa9.54□□□□□ -0.88
EIF4B-208ENST00000550025 LAPTM4AQ15012 233 aa9.54□□□□□ -0.88
EIF4B-208ENST00000550025 SKIV2LQ15477 1246 aaKnown RBP9.54□□□□□ -0.88
EIF4B-208ENST00000550025 ZNF697Q5TEC3 545 aa9.54□□□□□ -0.88
EIF4B-208ENST00000550025 GFRA3O60609 400 aa9.53□□□□□ -0.88
EIF4B-208ENST00000550025 PTPRNQ16849 979 aa9.53□□□□□ -0.88
EIF4B-208ENST00000550025 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.53□□□□□ -0.88
EIF4B-208ENST00000550025 POLR3EQ9NVU0 708 aa9.53□□□□□ -0.88
EIF4B-208ENST00000550025 CD2BP2O95400 341 aaKnown RBP9.52□□□□□ -0.89
EIF4B-208ENST00000550025 NEUROD2Q15784 382 aa9.52□□□□□ -0.89
EIF4B-208ENST00000550025 PTCRAQ6ISU1 281 aaPredicted RBP9.52□□□□□ -0.89
EIF4B-208ENST00000550025 LYPD8Q6UX82 237 aa9.52□□□□□ -0.89
EIF4B-208ENST00000550025 NUDT12Q9BQG2 462 aa9.52□□□□□ -0.89
EIF4B-208ENST00000550025 EVA1BQ9NVM1 165 aa9.52□□□□□ -0.89
EIF4B-208ENST00000550025 PKD2L1Q9P0L9 805 aa9.52□□□□□ -0.89
EIF4B-208ENST00000550025 PDZRN3Q9UPQ7 1066 aa9.52□□□□□ -0.89
EIF4B-208ENST00000550025 NRG2O14511 850 aaPredicted RBP9.51□□□□□ -0.89
EIF4B-208ENST00000550025 TRIM32Q13049 653 aa9.51□□□□□ -0.89
EIF4B-208ENST00000550025 CSPP1Q1MSJ5 1256 aa9.51□□□□□ -0.89
EIF4B-208ENST00000550025 RTL5Q5HYW3 569 aaPredicted RBP9.51□□□□□ -0.89
EIF4B-208ENST00000550025 FBXO31Q5XUX0 539 aaPredicted RBP9.51□□□□□ -0.89
EIF4B-208ENST00000550025 CCNYL3P0C7X3 344 aa9.5□□□□□ -0.89
EIF4B-208ENST00000550025 GOPCQ9HD26 462 aa9.5□□□□□ -0.89
EIF4B-208ENST00000550025 ZBTB24O43167 697 aaPredicted RBP9.49□□□□□ -0.89
EIF4B-208ENST00000550025 PRKCSHP14314 528 aaPredicted RBP9.49□□□□□ -0.89
EIF4B-208ENST00000550025 CCDC24Q8N4L8 307 aa9.49□□□□□ -0.89
EIF4B-208ENST00000550025 PROCA1Q8NCQ7 364 aaPredicted RBP9.49□□□□□ -0.89
EIF4B-208ENST00000550025 PPP2R2DQ66LE6 453 aa9.48□□□□□ -0.89
EIF4B-208ENST00000550025 LCE2BO14633 110 aa9.47□□□□□ -0.89
EIF4B-208ENST00000550025 KCNH2Q12809 1159 aa9.47□□□□□ -0.89
EIF4B-208ENST00000550025 NUTM2BA6NNL0 878 aaPredicted RBP9.46□□□□□ -0.9
EIF4B-208ENST00000550025 NUTM2EB1AL46 878 aaPredicted RBP9.46□□□□□ -0.9
EIF4B-208ENST00000550025 PER1O15534 1290 aaPredicted RBP9.46□□□□□ -0.9
EIF4B-208ENST00000550025 F12P00748 615 aaPredicted RBP9.46□□□□□ -0.9
EIF4B-208ENST00000550025 SKOR1P84550 965 aa9.46□□□□□ -0.9
EIF4B-208ENST00000550025 NUTM2DQ5VT03 806 aaPredicted RBP9.46□□□□□ -0.9
EIF4B-208ENST00000550025 NUTM2AQ8IVF1 878 aaPredicted RBP9.46□□□□□ -0.9
EIF4B-208ENST00000550025 WNT7AO00755 349 aa9.45□□□□□ -0.9
EIF4B-208ENST00000550025 WNT7BP56706 349 aa9.45□□□□□ -0.9
EIF4B-208ENST00000550025 IL27Q8NEV9 243 aa9.45□□□□□ -0.9
EIF4B-208ENST00000550025 TNFRSF10AO00220 468 aa9.44□□□□□ -0.9
EIF4B-208ENST00000550025 TOR4AQ9NXH8 423 aa9.44□□□□□ -0.9
EIF4B-208ENST00000550025 UNC93B1Q9H1C4 597 aa9.43□□□□□ -0.9
EIF4B-208ENST00000550025 FOXC1Q12948 553 aa9.42□□□□□ -0.9
EIF4B-208ENST00000550025 Q6ZNB5 142 aa9.41□□□□□ -0.9
EIF4B-208ENST00000550025 SH3BP2P78314 561 aa9.4□□□□□ -0.9
EIF4B-208ENST00000550025 CTDSPL2Q05D32 466 aa9.4□□□□□ -0.9
EIF4B-208ENST00000550025 RC3H1Q5TC82 1133 aaKnown RBP9.4□□□□□ -0.9
EIF4B-208ENST00000550025 HELBQ8NG08 1087 aaPredicted RBP9.4□□□□□ -0.9
EIF4B-208ENST00000550025 MRGPRX2Q96LB1 330 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms