RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 E9PSI1 815 aa11.72□□□□□ -0.53
TMEM116-209ENST00000550020 CDCA7LQ96GN5 454 aa11.72□□□□□ -0.53
TMEM116-209ENST00000550020 POGKQ9P215 609 aa11.71□□□□□ -0.53
TMEM116-209ENST00000550020 ARHGEF28Q8N1W1 1705 aaKnown RBP11.71□□□□□ -0.54
TMEM116-209ENST00000550020 YTHDC2Q9H6S0 1430 aaKnown RBP11.7□□□□□ -0.54
TMEM116-209ENST00000550020 TCERG1O14776 1098 aaKnown RBP11.7□□□□□ -0.54
TMEM116-209ENST00000550020 SLFN5Q08AF3 891 aa11.7□□□□□ -0.54
TMEM116-209ENST00000550020 SLC12A5Q9H2X9 1139 aa11.7□□□□□ -0.54
TMEM116-209ENST00000550020 SPATA31D1Q6ZQQ2 1576 aa11.7□□□□□ -0.54
TMEM116-209ENST00000550020 TULP4Q9NRJ4 1543 aa11.7□□□□□ -0.54
TMEM116-209ENST00000550020 PLEKHH1Q9ULM0 1364 aa11.69□□□□□ -0.54
TMEM116-209ENST00000550020 SRPK2P78362 688 aaKnown RBP11.69□□□□□ -0.54
TMEM116-209ENST00000550020 DUSP27Q5VZP5 1158 aa11.69□□□□□ -0.54
TMEM116-209ENST00000550020 HDGFL2Q7Z4V5 671 aaPredicted RBP11.69□□□□□ -0.54
TMEM116-209ENST00000550020 RUNDC1Q96C34 613 aa11.69□□□□□ -0.54
TMEM116-209ENST00000550020 PNNQ9H307 717 aaKnown RBP11.69□□□□□ -0.54
TMEM116-209ENST00000550020 DLC1Q96QB1 1528 aa11.69□□□□□ -0.54
TMEM116-209ENST00000550020 NKTRP30414 1462 aaKnown RBP11.69□□□□□ -0.54
TMEM116-209ENST00000550020 APAF1O14727 1248 aa11.68□□□□□ -0.54
TMEM116-209ENST00000550020 MS4A1P11836 297 aa11.68□□□□□ -0.54
TMEM116-209ENST00000550020 ERICH6Q7L0X2 663 aa11.68□□□□□ -0.54
TMEM116-209ENST00000550020 TRMT2AQ8IZ69 625 aaKnown RBP11.68□□□□□ -0.54
TMEM116-209ENST00000550020 EXOC6Q8TAG9 804 aa11.68□□□□□ -0.54
TMEM116-209ENST00000550020 ARHGEF40Q8TER5 1519 aa11.68□□□□□ -0.54
TMEM116-209ENST00000550020 MED14O60244 1454 aa11.68□□□□□ -0.54
TMEM116-209ENST00000550020 ABCC11Q96J66 1382 aa11.67□□□□□ -0.54
TMEM116-209ENST00000550020 SENP3-EIF4A1A0A087X0R7 540 aa11.67□□□□□ -0.54
TMEM116-209ENST00000550020 ANP32EQ9BTT0 268 aa11.67□□□□□ -0.54
TMEM116-209ENST00000550020 PTPRMP28827 1452 aa11.67□□□□□ -0.54
TMEM116-209ENST00000550020 CCDC27Q2M243 656 aa11.66□□□□□ -0.54
TMEM116-209ENST00000550020 NUTM2DQ5VT03 806 aaPredicted RBP11.66□□□□□ -0.54
TMEM116-209ENST00000550020 WDR63Q8IWG1 891 aa11.66□□□□□ -0.54
TMEM116-209ENST00000550020 STK26Q9P289 416 aa11.66□□□□□ -0.54
TMEM116-209ENST00000550020 ALKQ9UM73 1620 aa11.66□□□□□ -0.54
TMEM116-209ENST00000550020 RIMS2Q9UQ26 1411 aa11.66□□□□□ -0.54
TMEM116-209ENST00000550020 CLTCQ00610 1675 aaKnown RBP11.65□□□□□ -0.54
TMEM116-209ENST00000550020 A2ML1A8K2U0 1454 aa11.65□□□□□ -0.54
TMEM116-209ENST00000550020 CFAP65Q6ZU64 1925 aaKnown RBP11.65□□□□□ -0.54
TMEM116-209ENST00000550020 AAMPQ13685 434 aa11.65□□□□□ -0.54
TMEM116-209ENST00000550020 FBXO31Q5XUX0 539 aaPredicted RBP11.65□□□□□ -0.54
TMEM116-209ENST00000550020 CCDC146Q8IYE0 955 aa11.65□□□□□ -0.54
TMEM116-209ENST00000550020 PRAM1Q96QH2 718 aa11.65□□□□□ -0.54
TMEM116-209ENST00000550020 CABP2Q9NPB3 220 aa11.65□□□□□ -0.54
TMEM116-209ENST00000550020 ANP32AP39687 249 aaKnown RBP11.64□□□□□ -0.55
TMEM116-209ENST00000550020 MTHFSP49914 203 aa11.64□□□□□ -0.55
TMEM116-209ENST00000550020 SIRT1Q96EB6 747 aa11.64□□□□□ -0.55
TMEM116-209ENST00000550020 CENPQQ7L2Z9 268 aaPredicted RBP11.63□□□□□ -0.55
TMEM116-209ENST00000550020 CRBNQ96SW2 442 aa11.63□□□□□ -0.55
TMEM116-209ENST00000550020 MYH16Q9H6N6 1097 aa11.63□□□□□ -0.55
TMEM116-209ENST00000550020 CT47B1P0C2W7 299 aaPredicted RBP11.62□□□□□ -0.55
TMEM116-209ENST00000550020 PDE3AQ14432 1141 aa11.62□□□□□ -0.55
TMEM116-209ENST00000550020 WWC1Q8IX03 1113 aa11.62□□□□□ -0.55
TMEM116-209ENST00000550020 A0A1W2PP64 1363 aa11.62□□□□□ -0.55
TMEM116-209ENST00000550020 ATP7BP35670 1465 aa11.62□□□□□ -0.55
TMEM116-209ENST00000550020 MINK1Q8N4C8 1332 aaPredicted RBP11.61□□□□□ -0.55
TMEM116-209ENST00000550020 TSPOAP1O95153 1857 aa11.61□□□□□ -0.55
TMEM116-209ENST00000550020 TNNT2P45379 298 aaPredicted RBP11.61□□□□□ -0.55
TMEM116-209ENST00000550020 CDK19Q9BWU1 502 aa11.61□□□□□ -0.55
TMEM116-209ENST00000550020 ZMYM3Q14202 1370 aa11.61□□□□□ -0.55
TMEM116-209ENST00000550020 IQSEC2Q5JU85 1478 aa11.6□□□□□ -0.55
TMEM116-209ENST00000550020 TNRQ92752 1358 aa11.6□□□□□ -0.55
TMEM116-209ENST00000550020 NEFMP07197 916 aa11.6□□□□□ -0.55
TMEM116-209ENST00000550020 U2AF1L5P0DN76 240 aaPredicted RBP11.6□□□□□ -0.55
TMEM116-209ENST00000550020 U2AF1Q01081 240 aaKnown RBP eCLIP11.6□□□□□ -0.551e-6■■□□□ 12.9
TMEM116-209ENST00000550020 SAFB2Q14151 953 aaKnown RBP eCLIP11.6□□□□□ -0.55
TMEM116-209ENST00000550020 TCP11L2Q8N4U5 519 aa11.6□□□□□ -0.55
TMEM116-209ENST00000550020 FAM135BQ49AJ0 1406 aa11.6□□□□□ -0.55
TMEM116-209ENST00000550020 MAPK8IP3Q9UPT6 1336 aa11.6□□□□□ -0.55
TMEM116-209ENST00000550020 SHPRHQ149N8 1683 aa11.59□□□□□ -0.55
TMEM116-209ENST00000550020 PLIN1O60240 522 aa11.59□□□□□ -0.55
TMEM116-209ENST00000550020 CANXP27824 592 aaKnown RBP11.59□□□□□ -0.55
TMEM116-209ENST00000550020 PHF23Q9BUL5 403 aaPredicted RBP11.59□□□□□ -0.55
TMEM116-209ENST00000550020 MYO5BQ9ULV0 1848 aa11.58□□□□□ -0.56
TMEM116-209ENST00000550020 MLECQ14165 292 aa11.58□□□□□ -0.56
TMEM116-209ENST00000550020 TECPR2O15040 1411 aa11.57□□□□□ -0.56
TMEM116-209ENST00000550020 ANKRD26Q9UPS8 1709 aa11.57□□□□□ -0.56
TMEM116-209ENST00000550020 NLRP1Q9C000 1473 aa11.57□□□□□ -0.56
TMEM116-209ENST00000550020 FYB1O15117 783 aa11.56□□□□□ -0.56
TMEM116-209ENST00000550020 DIAPH1O60610 1272 aaKnown RBP11.56□□□□□ -0.56
TMEM116-209ENST00000550020 IL16Q14005 1332 aa11.56□□□□□ -0.56
TMEM116-209ENST00000550020 EDC4Q6P2E9 1401 aaKnown RBP11.55□□□□□ -0.56
TMEM116-209ENST00000550020 WASLO00401 505 aaPredicted RBP11.55□□□□□ -0.56
TMEM116-209ENST00000550020 CALD1Q05682 793 aaKnown RBP11.55□□□□□ -0.56
TMEM116-209ENST00000550020 GGNBP2Q9H3C7 697 aa11.55□□□□□ -0.56
TMEM116-209ENST00000550020 CABP1Q9NZU7 370 aa11.55□□□□□ -0.56
TMEM116-209ENST00000550020 CD163L1Q9NR16 1453 aa11.55□□□□□ -0.56
TMEM116-209ENST00000550020 TMEM2Q9UHN6 1383 aa11.54□□□□□ -0.56
TMEM116-209ENST00000550020 KIF13AQ9H1H9 1805 aa11.54□□□□□ -0.56
TMEM116-209ENST00000550020 U2SURPO15042 1029 aaKnown RBP11.54□□□□□ -0.56
TMEM116-209ENST00000550020 FCHSD2O94868 740 aa11.54□□□□□ -0.56
TMEM116-209ENST00000550020 ZNF692Q9BU19 519 aaPredicted RBP11.54□□□□□ -0.56
TMEM116-209ENST00000550020 KNDC1Q76NI1 1749 aa11.54□□□□□ -0.56
TMEM116-209ENST00000550020 KDM2BQ8NHM5 1336 aa11.54□□□□□ -0.56
TMEM116-209ENST00000550020 ADGRB2O60241 1585 aa11.54□□□□□ -0.56
TMEM116-209ENST00000550020 PNPLA6Q8IY17 1366 aa11.54□□□□□ -0.56
TMEM116-209ENST00000550020 PDE4AP27815 886 aa11.53□□□□□ -0.56
TMEM116-209ENST00000550020 IPO9Q96P70 1041 aaKnown RBP11.53□□□□□ -0.56
TMEM116-209ENST00000550020 COL3A1P02461 1466 aaPredicted RBP11.52□□□□□ -0.56
TMEM116-209ENST00000550020 CPS1P31327 1500 aa11.52□□□□□ -0.57
TMEM116-209ENST00000550020 NEUROD2Q15784 382 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms