RNA–Protein interactions for RNA: ENST00000549349.5

CALCOCO1-213, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 4

Gene CALCOCO1, Length 586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-213ENST00000549349 CENPJQ9HC77 1338 aaPredicted RBP13.52□□□□□ -0.25
CALCOCO1-213ENST00000549349 USP47Q96K76 1375 aa13.52□□□□□ -0.25
CALCOCO1-213ENST00000549349 FMN2Q9NZ56 1722 aa13.51□□□□□ -0.25
CALCOCO1-213ENST00000549349 ST20-MTHFSA0A0A6YYL1 179 aa13.51□□□□□ -0.25
CALCOCO1-213ENST00000549349 ZEB1P37275 1124 aaPredicted RBP13.51□□□□□ -0.25
CALCOCO1-213ENST00000549349 ADGRL3Q9HAR2 1447 aa13.5□□□□□ -0.25
CALCOCO1-213ENST00000549349 NUTM2FA1L443 756 aa13.5□□□□□ -0.25
CALCOCO1-213ENST00000549349 HSPA5P11021 654 aaKnown RBP13.5□□□□□ -0.25
CALCOCO1-213ENST00000549349 MSH6P52701 1360 aa13.49□□□□□ -0.25
CALCOCO1-213ENST00000549349 C19orf44Q9H6X5 657 aa13.49□□□□□ -0.25
CALCOCO1-213ENST00000549349 NCOA3Q9Y6Q9 1424 aa13.48□□□□□ -0.25
CALCOCO1-213ENST00000549349 USP32Q8NFA0 1604 aa13.48□□□□□ -0.25
CALCOCO1-213ENST00000549349 ADGRB2O60241 1585 aa13.48□□□□□ -0.25
CALCOCO1-213ENST00000549349 EIF3AQ14152 1382 aaKnown RBP13.47□□□□□ -0.25
CALCOCO1-213ENST00000549349 EIF4G2P78344 907 aaKnown RBP eCLIP13.47□□□□□ -0.25
CALCOCO1-213ENST00000549349 TULP4Q9NRJ4 1543 aa13.47□□□□□ -0.25
CALCOCO1-213ENST00000549349 CDC42BPGQ6DT37 1551 aa13.46□□□□□ -0.25
CALCOCO1-213ENST00000549349 ATF3P18847 181 aa13.46□□□□□ -0.25
CALCOCO1-213ENST00000549349 TESK2Q96S53 571 aa13.46□□□□□ -0.25
CALCOCO1-213ENST00000549349 IQSEC2Q5JU85 1478 aa13.45□□□□□ -0.26
CALCOCO1-213ENST00000549349 WASLO00401 505 aaPredicted RBP13.45□□□□□ -0.26
CALCOCO1-213ENST00000549349 CDK19Q9BWU1 502 aa13.45□□□□□ -0.26
CALCOCO1-213ENST00000549349 UBAP1LF5GYI3 381 aa13.44□□□□□ -0.26
CALCOCO1-213ENST00000549349 CABP2Q9NPB3 220 aa13.44□□□□□ -0.26
CALCOCO1-213ENST00000549349 PIP4K2BP78356 416 aa13.43□□□□□ -0.26
CALCOCO1-213ENST00000549349 MST1RQ04912 1400 aa13.43□□□□□ -0.26
CALCOCO1-213ENST00000549349 ITSN1Q15811 1721 aa13.43□□□□□ -0.26
CALCOCO1-213ENST00000549349 CADPS2Q86UW7 1296 aa13.43□□□□□ -0.26
CALCOCO1-213ENST00000549349 ROBO1Q9Y6N7 1651 aa13.43□□□□□ -0.26
CALCOCO1-213ENST00000549349 PRR36Q9H6K5 1346 aa13.42□□□□□ -0.26
CALCOCO1-213ENST00000549349 DCCP43146 1447 aa13.42□□□□□ -0.26
CALCOCO1-213ENST00000549349 SLAIN2Q9P270 581 aa13.42□□□□□ -0.26
CALCOCO1-213ENST00000549349 DISP3Q9P2K9 1392 aa13.42□□□□□ -0.26
CALCOCO1-213ENST00000549349 EVC2Q86UK5 1308 aa13.41□□□□□ -0.26
CALCOCO1-213ENST00000549349 SCAF1Q9H7N4 1312 aaKnown RBP13.41□□□□□ -0.26
CALCOCO1-213ENST00000549349 TOPAZ1Q8N9V7 1692 aa13.41□□□□□ -0.26
CALCOCO1-213ENST00000549349 C11orf95C9JLR9 678 aaPredicted RBP13.41□□□□□ -0.26
CALCOCO1-213ENST00000549349 TOM1O60784 492 aa13.41□□□□□ -0.26
CALCOCO1-213ENST00000549349 SRPK2P78362 688 aaKnown RBP13.41□□□□□ -0.26
CALCOCO1-213ENST00000549349 ORAI2Q96SN7 254 aa13.41□□□□□ -0.26
CALCOCO1-213ENST00000549349 SBNO2Q9Y2G9 1366 aa13.41□□□□□ -0.26
CALCOCO1-213ENST00000549349 C1orf167Q5SNV9 1468 aa13.41□□□□□ -0.26
CALCOCO1-213ENST00000549349 NUDT16Q96DE0 195 aaKnown RBP13.4□□□□□ -0.26
CALCOCO1-213ENST00000549349 DDX17Q92841 729 aaKnown RBP13.39□□□□□ -0.27
CALCOCO1-213ENST00000549349 ATP7BP35670 1465 aa13.39□□□□□ -0.27
CALCOCO1-213ENST00000549349 AKAP12Q02952 1782 aa13.38□□□□□ -0.27
CALCOCO1-213ENST00000549349 MYOM1P52179 1685 aa13.38□□□□□ -0.27
CALCOCO1-213ENST00000549349 TMF1P82094 1093 aa13.38□□□□□ -0.27
CALCOCO1-213ENST00000549349 ESCO1Q5FWF5 840 aa13.38□□□□□ -0.27
CALCOCO1-213ENST00000549349 PMFBP1Q8TBY8 1022 aa13.38□□□□□ -0.27
CALCOCO1-213ENST00000549349 POLR3GLQ9BT43 218 aa13.38□□□□□ -0.27
CALCOCO1-213ENST00000549349 BRINP3Q76B58 766 aa13.37□□□□□ -0.27
CALCOCO1-213ENST00000549349 PHLPP1O60346 1717 aa13.36□□□□□ -0.27
CALCOCO1-213ENST00000549349 NHSL1Q5SYE7 1610 aa13.36□□□□□ -0.27
CALCOCO1-213ENST00000549349 KIF1AQ12756 1690 aa13.35□□□□□ -0.27
CALCOCO1-213ENST00000549349 CABP1Q9NZU7 370 aa13.35□□□□□ -0.27
CALCOCO1-213ENST00000549349 ANKARQ7Z5J8 1434 aa13.35□□□□□ -0.27
CALCOCO1-213ENST00000549349 PPIP5K1Q6PFW1 1433 aa13.34□□□□□ -0.27
CALCOCO1-213ENST00000549349 XPCQ01831 940 aaPredicted RBP13.34□□□□□ -0.27
CALCOCO1-213ENST00000549349 TMC1Q8TDI8 760 aa13.34□□□□□ -0.27
CALCOCO1-213ENST00000549349 SLC12A5Q9H2X9 1139 aa13.34□□□□□ -0.27
CALCOCO1-213ENST00000549349 PHF8Q9UPP1 1060 aa13.34□□□□□ -0.27
CALCOCO1-213ENST00000549349 CCDC61Q9Y6R9 512 aa13.34□□□□□ -0.27
CALCOCO1-213ENST00000549349 FOXO3O43524 673 aa13.33□□□□□ -0.28
CALCOCO1-213ENST00000549349 MON2Q7Z3U7 1717 aa13.32□□□□□ -0.28
CALCOCO1-213ENST00000549349 KIF7Q2M1P5 1343 aa13.32□□□□□ -0.28
CALCOCO1-213ENST00000549349 ATAD2Q6PL18 1390 aa13.32□□□□□ -0.28
CALCOCO1-213ENST00000549349 TRPM3Q9HCF6 1732 aaPredicted RBP13.31□□□□□ -0.28
CALCOCO1-213ENST00000549349 SLC24A1O60721 1099 aa13.31□□□□□ -0.28
CALCOCO1-213ENST00000549349 FBXO41Q8TF61 875 aa13.31□□□□□ -0.28
CALCOCO1-213ENST00000549349 ACEP12821 1306 aa13.31□□□□□ -0.28
CALCOCO1-213ENST00000549349 PLEKHG3A1L390 1219 aa13.3□□□□□ -0.28
CALCOCO1-213ENST00000549349 NGDNQ8NEJ9 315 aaKnown RBP13.3□□□□□ -0.28
CALCOCO1-213ENST00000549349 AHDC1Q5TGY3 1603 aaPredicted RBP13.3□□□□□ -0.28
CALCOCO1-213ENST00000549349 WASHC2AQ641Q2 1341 aa13.3□□□□□ -0.28
CALCOCO1-213ENST00000549349 CD163L1Q9NR16 1453 aa13.29□□□□□ -0.28
CALCOCO1-213ENST00000549349 COL16A1Q07092 1604 aaPredicted RBP13.29□□□□□ -0.28
CALCOCO1-213ENST00000549349 PUS7Q96PZ0 661 aaKnown RBP13.29□□□□□ -0.28
CALCOCO1-213ENST00000549349 CCDC7Q96M83 1385 aa13.29□□□□□ -0.28
CALCOCO1-213ENST00000549349 HSPA1LP34931 641 aa13.28□□□□□ -0.28
CALCOCO1-213ENST00000549349 PSME1Q06323 249 aa13.28□□□□□ -0.28
CALCOCO1-213ENST00000549349 CDCA8Q53HL2 280 aa13.28□□□□□ -0.28
CALCOCO1-213ENST00000549349 KRT28Q7Z3Y7 464 aa13.28□□□□□ -0.28
CALCOCO1-213ENST00000549349 PXDNQ92626 1479 aa13.28□□□□□ -0.28
CALCOCO1-213ENST00000549349 POLR3AO14802 1390 aaPredicted RBP13.27□□□□□ -0.29
CALCOCO1-213ENST00000549349 ALS2Q96Q42 1657 aa13.27□□□□□ -0.29
CALCOCO1-213ENST00000549349 A0A1W2PP64 1363 aa13.26□□□□□ -0.29
CALCOCO1-213ENST00000549349 NRKQ7Z2Y5 1582 aa13.26□□□□□ -0.29
CALCOCO1-213ENST00000549349 NPHP3Q7Z494 1330 aa13.26□□□□□ -0.29
CALCOCO1-213ENST00000549349 KIF20BQ96Q89 1820 aa13.25□□□□□ -0.29
CALCOCO1-213ENST00000549349 CPSF1Q10570 1443 aaKnown RBP13.25□□□□□ -0.29
CALCOCO1-213ENST00000549349 SOS2Q07890 1332 aaPredicted RBP13.25□□□□□ -0.29
CALCOCO1-213ENST00000549349 PAK3O75914 559 aaPredicted RBP13.25□□□□□ -0.29
CALCOCO1-213ENST00000549349 PLEKHG5O94827 1062 aa13.25□□□□□ -0.29
CALCOCO1-213ENST00000549349 MARF1Q9Y4F3 1742 aaKnown RBP13.25□□□□□ -0.29
CALCOCO1-213ENST00000549349 KTN1Q86UP2 1357 aaKnown RBP13.24□□□□□ -0.29
CALCOCO1-213ENST00000549349 ZNF316A6NFI3 1004 aaPredicted RBP13.24□□□□□ -0.29
CALCOCO1-213ENST00000549349 ILDR1Q86SU0 546 aaPredicted RBP13.24□□□□□ -0.29
CALCOCO1-213ENST00000549349 CARD14Q9BXL6 1004 aa13.24□□□□□ -0.29
CALCOCO1-213ENST00000549349 PANK3Q9H999 370 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms