RNA–Protein interactions for RNA: ENST00000548918.1

TMCC3-202, Transcript of transmembrane and coiled-coil domain family 3, humanhuman

TSL 2

Gene TMCC3, Length 483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC3-202ENST00000548918 CFAP99D6REC4 459 aa8.18□□□□□ -1.1
TMCC3-202ENST00000548918 DNAJB2P25686 324 aa8.18□□□□□ -1.1
TMCC3-202ENST00000548918 KANK4Q5T7N3 995 aaPredicted RBP8.18□□□□□ -1.1
TMCC3-202ENST00000548918 TMEM164Q5U3C3 297 aa8.18□□□□□ -1.1
TMCC3-202ENST00000548918 KHSRPQ92945 711 aaKnown RBP eCLIP8.17□□□□□ -1.1
TMCC3-202ENST00000548918 SEC24BO95487 1268 aa8.16□□□□□ -1.1
TMCC3-202ENST00000548918 RDH13Q8NBN7 331 aa8.16□□□□□ -1.1
TMCC3-202ENST00000548918 PIK3CDO00329 1044 aa8.15□□□□□ -1.1
TMCC3-202ENST00000548918 ATP9BO43861 1147 aa8.15□□□□□ -1.1
TMCC3-202ENST00000548918 GCGRP47871 477 aa8.15□□□□□ -1.1
TMCC3-202ENST00000548918 C3orf67Q6ZVT6 689 aa8.15□□□□□ -1.1
TMCC3-202ENST00000548918 SOX11P35716 441 aa8.14□□□□□ -1.11
TMCC3-202ENST00000548918 MYT1LQ9UL68 1186 aa8.14□□□□□ -1.11
TMCC3-202ENST00000548918 SMAPO00193 183 aa8.13□□□□□ -1.11
TMCC3-202ENST00000548918 SLC10A3P09131 477 aa8.13□□□□□ -1.11
TMCC3-202ENST00000548918 NUDT7P0C024 238 aa8.13□□□□□ -1.11
TMCC3-202ENST00000548918 ELOAQ14241 798 aaKnown RBP8.13□□□□□ -1.11
TMCC3-202ENST00000548918 NR6A1Q15406 480 aa8.13□□□□□ -1.11
TMCC3-202ENST00000548918 TSC1Q92574 1164 aa8.13□□□□□ -1.11
TMCC3-202ENST00000548918 TATDN2Q93075 761 aa8.13□□□□□ -1.11
TMCC3-202ENST00000548918 PNMA3Q9UL41 463 aa8.13□□□□□ -1.11
TMCC3-202ENST00000548918 PER1O15534 1290 aaPredicted RBP8.12□□□□□ -1.11
TMCC3-202ENST00000548918 USP46P62068 366 aa8.12□□□□□ -1.11
TMCC3-202ENST00000548918 SEMA3FQ13275 785 aa8.12□□□□□ -1.11
TMCC3-202ENST00000548918 MTMR2Q13614 643 aa8.12□□□□□ -1.11
TMCC3-202ENST00000548918 MRRFQ96E11 262 aaKnown RBP8.12□□□□□ -1.11
TMCC3-202ENST00000548918 PUS7Q96PZ0 661 aaKnown RBP8.12□□□□□ -1.11
TMCC3-202ENST00000548918 ZNF16P17020 682 aaPredicted RBP8.11□□□□□ -1.11
TMCC3-202ENST00000548918 HELBQ8NG08 1087 aaPredicted RBP8.11□□□□□ -1.11
TMCC3-202ENST00000548918 FAM69CQ0P6D2 419 aa8.1□□□□□ -1.11
TMCC3-202ENST00000548918 RSPH4AQ5TD94 716 aa8.1□□□□□ -1.11
TMCC3-202ENST00000548918 NOVA2Q9UNW9 492 aaKnown RBP8.1□□□□□ -1.11
TMCC3-202ENST00000548918 NBPF26B4DH59 902 aa8.09□□□□□ -1.11
TMCC3-202ENST00000548918 SSFA2P28290 1259 aa8.09□□□□□ -1.11
TMCC3-202ENST00000548918 SCNN1AP37088 669 aa8.09□□□□□ -1.11
TMCC3-202ENST00000548918 CLCN6P51797 869 aa8.09□□□□□ -1.11
TMCC3-202ENST00000548918 B4GALNT3Q6L9W6 998 aa8.09□□□□□ -1.11
TMCC3-202ENST00000548918 SLF2Q8IX21 1173 aa8.09□□□□□ -1.11
TMCC3-202ENST00000548918 CCER1Q8TC90 406 aaPredicted RBP8.09□□□□□ -1.11
TMCC3-202ENST00000548918 SYMPKQ92797 1274 aaKnown RBP8.09□□□□□ -1.11
TMCC3-202ENST00000548918 TRIM6-TRIM34B2RNG4 842 aa8.08□□□□□ -1.12
TMCC3-202ENST00000548918 ARSIQ5FYB1 569 aa8.08□□□□□ -1.12
TMCC3-202ENST00000548918 USP17L3A6NCW0 530 aa8.07□□□□□ -1.12
TMCC3-202ENST00000548918 USP17L4A6NCW7 530 aa8.07□□□□□ -1.12
TMCC3-202ENST00000548918 SOWAHDA6NJG2 315 aa8.07□□□□□ -1.12
TMCC3-202ENST00000548918 PPP1R3GB7ZBB8 358 aa8.07□□□□□ -1.12
TMCC3-202ENST00000548918 SERPINB4P48594 390 aa8.07□□□□□ -1.12
TMCC3-202ENST00000548918 CRTC2Q53ET0 693 aaPredicted RBP8.07□□□□□ -1.12
TMCC3-202ENST00000548918 USP17L2Q6R6M4 530 aa8.07□□□□□ -1.12
TMCC3-202ENST00000548918 USP17L1Q7RTZ2 530 aa8.07□□□□□ -1.12
TMCC3-202ENST00000548918 FAM174AQ8TBP5 190 aa8.07□□□□□ -1.12
TMCC3-202ENST00000548918 HSP90B1P14625 803 aaKnown RBP8.06□□□□□ -1.12
TMCC3-202ENST00000548918 BCL2L12Q9HB09 334 aa8.06□□□□□ -1.12
TMCC3-202ENST00000548918 C6orf229H3BNL8 230 aa8.05□□□□□ -1.12
TMCC3-202ENST00000548918 FBXO45P0C2W1 286 aa8.05□□□□□ -1.12
TMCC3-202ENST00000548918 PROX2Q3B8N5 592 aa8.05□□□□□ -1.12
TMCC3-202ENST00000548918 FAM177A1Q8N128 213 aaPredicted RBP8.05□□□□□ -1.12
TMCC3-202ENST00000548918 DEPDC4Q8N2C3 294 aa8.05□□□□□ -1.12
TMCC3-202ENST00000548918 USP17L5A8MUK1 530 aa8.04□□□□□ -1.12
TMCC3-202ENST00000548918 USP17L15C9J2P7 530 aa8.04□□□□□ -1.12
TMCC3-202ENST00000548918 USP17L10C9JJH3 530 aa8.04□□□□□ -1.12
TMCC3-202ENST00000548918 USP17L13C9JLJ4 530 aa8.04□□□□□ -1.12
TMCC3-202ENST00000548918 USP17L12C9JPN9 530 aa8.04□□□□□ -1.12
TMCC3-202ENST00000548918 USP17L11C9JVI0 530 aa8.04□□□□□ -1.12
TMCC3-202ENST00000548918 USP17L21D6R901 530 aa8.04□□□□□ -1.12
TMCC3-202ENST00000548918 USP17L18D6R9N7 530 aa8.04□□□□□ -1.12
TMCC3-202ENST00000548918 USP17L22D6RA61 530 aa8.04□□□□□ -1.12
TMCC3-202ENST00000548918 USP17L17D6RBQ6 530 aa8.04□□□□□ -1.12
TMCC3-202ENST00000548918 USP17L19D6RCP7 530 aa8.04□□□□□ -1.12
TMCC3-202ENST00000548918 USP17L20D6RJB6 530 aa8.04□□□□□ -1.12
TMCC3-202ENST00000548918 ARID4AP29374 1257 aaPredicted RBP8.04□□□□□ -1.12
TMCC3-202ENST00000548918 EIF4G2P78344 907 aaKnown RBP eCLIP8.04□□□□□ -1.12
TMCC3-202ENST00000548918 USP17L24Q0WX57 530 aa8.04□□□□□ -1.12
TMCC3-202ENST00000548918 NR1H3Q13133 447 aa8.04□□□□□ -1.12
TMCC3-202ENST00000548918 LHX6Q9UPM6 363 aa8.04□□□□□ -1.12
TMCC3-202ENST00000548918 HOXB3P14651 431 aaPredicted RBP8.03□□□□□ -1.12
TMCC3-202ENST00000548918 SWT1Q5T5J6 900 aaKnown RBP8.03□□□□□ -1.12
TMCC3-202ENST00000548918 NPAS4Q8IUM7 802 aa8.03□□□□□ -1.12
TMCC3-202ENST00000548918 PLEKHM2Q8IWE5 1019 aa8.03□□□□□ -1.12
TMCC3-202ENST00000548918 GIPC2Q8TF65 315 aa8.03□□□□□ -1.12
TMCC3-202ENST00000548918 SLC39A7Q92504 469 aa8.03□□□□□ -1.12
TMCC3-202ENST00000548918 SIRT1Q96EB6 747 aa8.03□□□□□ -1.12
TMCC3-202ENST00000548918 BCL2L13Q9BXK5 485 aa8.03□□□□□ -1.12
TMCC3-202ENST00000548918 FAM196BA6NMK8 535 aa8.02□□□□□ -1.13
TMCC3-202ENST00000548918 SKIP12755 728 aa8.02□□□□□ -1.13
TMCC3-202ENST00000548918 ERCC3P19447 782 aa8.02□□□□□ -1.13
TMCC3-202ENST00000548918 FUT2Q10981 343 aa8.02□□□□□ -1.13
TMCC3-202ENST00000548918 GPR153Q6NV75 609 aa8.02□□□□□ -1.13
TMCC3-202ENST00000548918 PACS2Q86VP3 889 aa8.02□□□□□ -1.13
TMCC3-202ENST00000548918 NFATC2IPQ8NCF5 419 aa8.02□□□□□ -1.13
TMCC3-202ENST00000548918 HAX1O00165 279 aa8.01□□□□□ -1.13
TMCC3-202ENST00000548918 TCF3P15923 654 aa8.01□□□□□ -1.13
TMCC3-202ENST00000548918 TAGLNQ01995 201 aaKnown RBP8.01□□□□□ -1.13
TMCC3-202ENST00000548918 PTK7Q13308 1070 aa8.01□□□□□ -1.13
TMCC3-202ENST00000548918 CLP1Q92989 425 aaKnown RBP8.01□□□□□ -1.13
TMCC3-202ENST00000548918 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.01□□□□□ -1.13
TMCC3-202ENST00000548918 METRNQ9UJH8 293 aa8.01□□□□□ -1.13
TMCC3-202ENST00000548918 C7P10643 843 aa8□□□□□ -1.13
TMCC3-202ENST00000548918 MARSP56192 900 aaKnown RBP8□□□□□ -1.13
TMCC3-202ENST00000548918 ANKRD33BA6NCL7 494 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms