RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 SAFB2Q14151 953 aaKnown RBP eCLIP29.8■■■□□ 2.36
CACNB3-210ENST00000548874 CERKQ8TCT0 537 aa29.8■■■□□ 2.36
CACNB3-210ENST00000548874 QRICH2Q9H0J4 1663 aa29.79■■■□□ 2.36
CACNB3-210ENST00000548874 ADGRB2O60241 1585 aa29.79■■■□□ 2.36
CACNB3-210ENST00000548874 C19orf44Q9H6X5 657 aa29.78■■■□□ 2.36
CACNB3-210ENST00000548874 C14orf37Q86TY3 774 aa29.77■■■□□ 2.36
CACNB3-210ENST00000548874 DCCP43146 1447 aa29.77■■■□□ 2.36
CACNB3-210ENST00000548874 MSH6P52701 1360 aa29.77■■■□□ 2.36
CACNB3-210ENST00000548874 SBNO2Q9Y2G9 1366 aa29.77■■■□□ 2.36
CACNB3-210ENST00000548874 CDC42BPGQ6DT37 1551 aa29.76■■■□□ 2.35
CACNB3-210ENST00000548874 ST20-MTHFSA0A0A6YYL1 179 aa29.75■■■□□ 2.35
CACNB3-210ENST00000548874 EIF4G2P78344 907 aaKnown RBP eCLIP29.74■■■□□ 2.35
CACNB3-210ENST00000548874 MINK1Q8N4C8 1332 aaPredicted RBP29.73■■■□□ 2.35
CACNB3-210ENST00000548874 TESK2Q96S53 571 aa29.71■■■□□ 2.35
CACNB3-210ENST00000548874 HSPA5P11021 654 aaKnown RBP29.7■■■□□ 2.35
CACNB3-210ENST00000548874 HIRIP3Q9BW71 556 aaPredicted RBP29.7■■■□□ 2.35
CACNB3-210ENST00000548874 TULP4Q9NRJ4 1543 aa29.67■■■□□ 2.34
CACNB3-210ENST00000548874 CADPS2Q86UW7 1296 aa29.67■■■□□ 2.34
CACNB3-210ENST00000548874 FMN2Q9NZ56 1722 aa29.66■■■□□ 2.34
CACNB3-210ENST00000548874 WASLO00401 505 aaPredicted RBP29.65■■■□□ 2.34
CACNB3-210ENST00000548874 ATF3P18847 181 aa29.65■■■□□ 2.34
CACNB3-210ENST00000548874 MST1RQ04912 1400 aa29.63■■■□□ 2.33
CACNB3-210ENST00000548874 SLC24A1O60721 1099 aa29.61■■■□□ 2.33
CACNB3-210ENST00000548874 EVC2Q86UK5 1308 aa29.61■■■□□ 2.33
CACNB3-210ENST00000548874 CDK19Q9BWU1 502 aa29.6■■■□□ 2.33
CACNB3-210ENST00000548874 ANKARQ7Z5J8 1434 aa29.59■■■□□ 2.33
CACNB3-210ENST00000548874 USP32Q8NFA0 1604 aa29.58■■■□□ 2.33
CACNB3-210ENST00000548874 C1orf167Q5SNV9 1468 aa29.57■■■□□ 2.32
CACNB3-210ENST00000548874 DISP3Q9P2K9 1392 aa29.56■■■□□ 2.32
CACNB3-210ENST00000548874 TOM1O60784 492 aa29.56■■■□□ 2.32
CACNB3-210ENST00000548874 SLAIN2Q9P270 581 aa29.56■■■□□ 2.32
CACNB3-210ENST00000548874 ATP7BP35670 1465 aa29.55■■■□□ 2.32
CACNB3-210ENST00000548874 PRR36Q9H6K5 1346 aa29.55■■■□□ 2.32
CACNB3-210ENST00000548874 TMF1P82094 1093 aa29.55■■■□□ 2.32
CACNB3-210ENST00000548874 UBAP1LF5GYI3 381 aa29.54■■■□□ 2.32
CACNB3-210ENST00000548874 NUTM2FA1L443 756 aa29.52■■■□□ 2.32
CACNB3-210ENST00000548874 SRPK2P78362 688 aaKnown RBP29.52■■■□□ 2.32
CACNB3-210ENST00000548874 PUS7Q96PZ0 661 aaKnown RBP29.52■■■□□ 2.32
CACNB3-210ENST00000548874 CABP2Q9NPB3 220 aa29.52■■■□□ 2.32
CACNB3-210ENST00000548874 NUDT16Q96DE0 195 aaKnown RBP29.5■■■□□ 2.31
CACNB3-210ENST00000548874 TOPAZ1Q8N9V7 1692 aa29.49■■■□□ 2.31
CACNB3-210ENST00000548874 RGPD8O14715 1765 aaPredicted RBP29.49■■■□□ 2.31
CACNB3-210ENST00000548874 ATAD2Q6PL18 1390 aa29.48■■■□□ 2.31
CACNB3-210ENST00000548874 ITSN1Q15811 1721 aa29.46■■■□□ 2.31
CACNB3-210ENST00000548874 ORAI2Q96SN7 254 aa29.46■■■□□ 2.31
CACNB3-210ENST00000548874 CDCA8Q53HL2 280 aa29.45■■■□□ 2.31
CACNB3-210ENST00000548874 BRINP3Q76B58 766 aa29.45■■■□□ 2.31
CACNB3-210ENST00000548874 CCDC61Q9Y6R9 512 aa29.45■■■□□ 2.31
CACNB3-210ENST00000548874 ROBO1Q9Y6N7 1651 aa29.44■■■□□ 2.3
CACNB3-210ENST00000548874 C11orf95C9JLR9 678 aaPredicted RBP29.44■■■□□ 2.3
CACNB3-210ENST00000548874 ESCO1Q5FWF5 840 aa29.43■■■□□ 2.3
CACNB3-210ENST00000548874 KIF1AQ12756 1690 aa29.42■■■□□ 2.3
CACNB3-210ENST00000548874 PPIP5K1Q6PFW1 1433 aa29.41■■■□□ 2.3
CACNB3-210ENST00000548874 PIP4K2BP78356 416 aa29.4■■■□□ 2.3
CACNB3-210ENST00000548874 PHF8Q9UPP1 1060 aa29.4■■■□□ 2.3
CACNB3-210ENST00000548874 PLEKHG3A1L390 1219 aa29.39■■■□□ 2.3
CACNB3-210ENST00000548874 KIF7Q2M1P5 1343 aa29.37■■■□□ 2.29
CACNB3-210ENST00000548874 CABP1Q9NZU7 370 aa29.36■■■□□ 2.29
CACNB3-210ENST00000548874 NINLQ9Y2I6 1382 aa29.36■■■□□ 2.29
CACNB3-210ENST00000548874 SCAF1Q9H7N4 1312 aaKnown RBP29.35■■■□□ 2.29
CACNB3-210ENST00000548874 POLR3AO14802 1390 aaPredicted RBP29.35■■■□□ 2.29
CACNB3-210ENST00000548874 NHSL1Q5SYE7 1610 aa29.34■■■□□ 2.29
CACNB3-210ENST00000548874 MYOM1P52179 1685 aa29.34■■■□□ 2.29
CACNB3-210ENST00000548874 PMFBP1Q8TBY8 1022 aa29.34■■■□□ 2.29
CACNB3-210ENST00000548874 AHDC1Q5TGY3 1603 aaPredicted RBP29.34■■■□□ 2.29
CACNB3-210ENST00000548874 FBXO41Q8TF61 875 aa29.33■■■□□ 2.29
CACNB3-210ENST00000548874 CCDC7Q96M83 1385 aa29.33■■■□□ 2.29
CACNB3-210ENST00000548874 WASHC2AQ641Q2 1341 aa29.32■■■□□ 2.28
CACNB3-210ENST00000548874 ACEP12821 1306 aa29.31■■■□□ 2.28
CACNB3-210ENST00000548874 SLC12A5Q9H2X9 1139 aa29.31■■■□□ 2.28
CACNB3-210ENST00000548874 CD163L1Q9NR16 1453 aa29.3■■■□□ 2.28
CACNB3-210ENST00000548874 NPHP3Q7Z494 1330 aa29.3■■■□□ 2.28
CACNB3-210ENST00000548874 FOXO3O43524 673 aa29.3■■■□□ 2.28
CACNB3-210ENST00000548874 TMC1Q8TDI8 760 aa29.3■■■□□ 2.28
CACNB3-210ENST00000548874 CPSF1Q10570 1443 aaKnown RBP29.29■■■□□ 2.28
CACNB3-210ENST00000548874 NGDNQ8NEJ9 315 aaKnown RBP29.28■■■□□ 2.28
CACNB3-210ENST00000548874 DDX17Q92841 729 aaKnown RBP29.28■■■□□ 2.28
CACNB3-210ENST00000548874 PXDNQ92626 1479 aa29.28■■■□□ 2.28
CACNB3-210ENST00000548874 POLR3GLQ9BT43 218 aa29.27■■■□□ 2.28
CACNB3-210ENST00000548874 AKAP12Q02952 1782 aa29.26■■■□□ 2.28
CACNB3-210ENST00000548874 SOS2Q07890 1332 aaPredicted RBP29.25■■■□□ 2.27
CACNB3-210ENST00000548874 A0A1W2PP64 1363 aa29.24■■■□□ 2.27
CACNB3-210ENST00000548874 ANKRD36BQ8N2N9 1353 aa29.24■■■□□ 2.27
CACNB3-210ENST00000548874 COL16A1Q07092 1604 aaPredicted RBP29.23■■■□□ 2.27
CACNB3-210ENST00000548874 PHLPP1O60346 1717 aa29.23■■■□□ 2.27
CACNB3-210ENST00000548874 USP6P35125 1406 aa29.22■■■□□ 2.27
CACNB3-210ENST00000548874 ZNF692Q9BU19 519 aaPredicted RBP29.22■■■□□ 2.27
CACNB3-210ENST00000548874 TERF2IPQ9NYB0 399 aa29.22■■■□□ 2.27
CACNB3-210ENST00000548874 MON2Q7Z3U7 1717 aa29.22■■■□□ 2.27
CACNB3-210ENST00000548874 TRPM3Q9HCF6 1732 aaPredicted RBP29.21■■■□□ 2.27
CACNB3-210ENST00000548874 PSME1Q06323 249 aa29.21■■■□□ 2.27
CACNB3-210ENST00000548874 KRT28Q7Z3Y7 464 aa29.21■■■□□ 2.27
CACNB3-210ENST00000548874 XPCQ01831 940 aaPredicted RBP29.2■■■□□ 2.26
CACNB3-210ENST00000548874 HDGFL2Q7Z4V5 671 aaPredicted RBP29.2■■■□□ 2.26
CACNB3-210ENST00000548874 BRD4O60885 1362 aaPredicted RBP29.2■■■□□ 2.26
CACNB3-210ENST00000548874 SSH2Q76I76 1423 aa29.2■■■□□ 2.26
CACNB3-210ENST00000548874 NRKQ7Z2Y5 1582 aa29.18■■■□□ 2.26
CACNB3-210ENST00000548874 SBNO1A3KN83 1393 aa29.18■■■□□ 2.26
CACNB3-210ENST00000548874 KTN1Q86UP2 1357 aaKnown RBP29.18■■■□□ 2.26
CACNB3-210ENST00000548874 ZNF316A6NFI3 1004 aaPredicted RBP29.18■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms