RNA–Protein interactions for RNA: ENST00000548570.1

APP-217, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 361 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-217ENST00000548570 SLIT1O75093 1534 aa7.29□□□□□ -1.24
APP-217ENST00000548570 CHGAP10645 457 aaKnown RBP7.29□□□□□ -1.24
APP-217ENST00000548570 NBPF8Q3BBV2 869 aa7.29□□□□□ -1.24
APP-217ENST00000548570 FAM212AQ96EL1 285 aa7.29□□□□□ -1.24
APP-217ENST00000548570 NEURL4Q96JN8 1562 aa7.29□□□□□ -1.24
APP-217ENST00000548570 RIMS2Q9UQ26 1411 aa7.28□□□□□ -1.24
APP-217ENST00000548570 TRPC6Q9Y210 931 aa7.28□□□□□ -1.24
APP-217ENST00000548570 NRXN1Q9ULB1 1477 aa7.28□□□□□ -1.24
APP-217ENST00000548570 RPGRIP1LQ68CZ1 1315 aa7.27□□□□□ -1.24
APP-217ENST00000548570 NCKAP5LQ9HCH0 1330 aa7.27□□□□□ -1.24
APP-217ENST00000548570 NEXMIFQ5QGS0 1516 aa7.27□□□□□ -1.25
APP-217ENST00000548570 POTEFA5A3E0 1075 aa7.27□□□□□ -1.25
APP-217ENST00000548570 PLCG2P16885 1265 aa7.27□□□□□ -1.25
APP-217ENST00000548570 LCE2DQ5TA82 110 aaPredicted RBP7.27□□□□□ -1.25
APP-217ENST00000548570 THEMISQ8N1K5 641 aaPredicted RBP7.27□□□□□ -1.25
APP-217ENST00000548570 COLQQ9Y215 455 aaPredicted RBP7.27□□□□□ -1.25
APP-217ENST00000548570 ADAMTS13Q76LX8 1427 aa7.27□□□□□ -1.25
APP-217ENST00000548570 PPP1R15AO75807 674 aaPredicted RBP7.26□□□□□ -1.25
APP-217ENST00000548570 TXNDC2Q86VQ3 553 aa7.26□□□□□ -1.25
APP-217ENST00000548570 SLAIN1Q8ND83 568 aa7.26□□□□□ -1.25
APP-217ENST00000548570 DCAF11Q8TEB1 546 aa7.26□□□□□ -1.25
APP-217ENST00000548570 UBR1Q8IWV7 1749 aa7.26□□□□□ -1.25
APP-217ENST00000548570 ZNF142P52746 1687 aaPredicted RBP7.25□□□□□ -1.25
APP-217ENST00000548570 MED14O60244 1454 aa7.25□□□□□ -1.25
APP-217ENST00000548570 ZNF326Q5BKZ1 582 aaKnown RBP7.25□□□□□ -1.25
APP-217ENST00000548570 CDAN1Q8IWY9 1227 aa7.25□□□□□ -1.25
APP-217ENST00000548570 KDM2AQ9Y2K7 1162 aa7.25□□□□□ -1.25
APP-217ENST00000548570 PIK3C2GO75747 1445 aa7.25□□□□□ -1.25
APP-217ENST00000548570 MYOM2P54296 1465 aa7.24□□□□□ -1.25
APP-217ENST00000548570 SCAF11Q99590 1463 aaKnown RBP7.24□□□□□ -1.25
APP-217ENST00000548570 PLEKHG1Q9ULL1 1385 aa7.24□□□□□ -1.25
APP-217ENST00000548570 NBPF1Q3BBV0 1214 aa7.24□□□□□ -1.25
APP-217ENST00000548570 CFAP70Q5T0N1 1121 aa7.24□□□□□ -1.25
APP-217ENST00000548570 ANKLE2Q86XL3 938 aa7.24□□□□□ -1.25
APP-217ENST00000548570 TMEM106CQ9BVX2 250 aa7.24□□□□□ -1.25
APP-217ENST00000548570 C14orf93Q9H972 538 aaKnown RBP7.24□□□□□ -1.25
APP-217ENST00000548570 TIMELESSQ9UNS1 1208 aa7.24□□□□□ -1.25
APP-217ENST00000548570 PRAG1Q86YV5 1406 aa7.24□□□□□ -1.25
APP-217ENST00000548570 METP08581 1390 aa7.23□□□□□ -1.25
APP-217ENST00000548570 TONSLQ96HA7 1378 aa7.23□□□□□ -1.25
APP-217ENST00000548570 KDM5AP29375 1690 aaKnown RBP7.23□□□□□ -1.25
APP-217ENST00000548570 VGFO15240 615 aaPredicted RBP7.23□□□□□ -1.25
APP-217ENST00000548570 SLC26A8Q96RN1 970 aa7.23□□□□□ -1.25
APP-217ENST00000548570 ASXL1Q8IXJ9 1541 aa7.22□□□□□ -1.25
APP-217ENST00000548570 NPHP4O75161 1426 aaPredicted RBP7.22□□□□□ -1.25
APP-217ENST00000548570 PTPRUQ92729 1446 aa7.22□□□□□ -1.25
APP-217ENST00000548570 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.22□□□□□ -1.25
APP-217ENST00000548570 NRXN3Q9Y4C0 1643 aa7.22□□□□□ -1.25
APP-217ENST00000548570 ADGRB1O14514 1584 aa7.21□□□□□ -1.25
APP-217ENST00000548570 SETBP1Q9Y6X0 1596 aa7.21□□□□□ -1.25
APP-217ENST00000548570 SNPHO15079 494 aa7.21□□□□□ -1.26
APP-217ENST00000548570 TMEM132EQ6IEE7 984 aa7.21□□□□□ -1.26
APP-217ENST00000548570 IFNL1Q8IU54 200 aa7.21□□□□□ -1.26
APP-217ENST00000548570 STAC3Q96MF2 364 aa7.21□□□□□ -1.26
APP-217ENST00000548570 TBX22Q9Y458 520 aa7.21□□□□□ -1.26
APP-217ENST00000548570 EID1Q9Y6B2 187 aa7.21□□□□□ -1.26
APP-217ENST00000548570 NUBP1P53384 320 aa7.2□□□□□ -1.26
APP-217ENST00000548570 GPRASP1Q5JY77 1395 aa7.2□□□□□ -1.26
APP-217ENST00000548570 IFT172Q9UG01 1749 aa7.19□□□□□ -1.26
APP-217ENST00000548570 STRCQ7RTU9 1775 aa7.19□□□□□ -1.26
APP-217ENST00000548570 HDGFP51858 240 aaKnown RBP7.19□□□□□ -1.26
APP-217ENST00000548570 AMER1Q5JTC6 1135 aaPredicted RBP7.19□□□□□ -1.26
APP-217ENST00000548570 TMEM121BQ9BXQ6 578 aaPredicted RBP7.19□□□□□ -1.26
APP-217ENST00000548570 ALKQ9UM73 1620 aa7.19□□□□□ -1.26
APP-217ENST00000548570 CFAP65Q6ZU64 1925 aaKnown RBP7.19□□□□□ -1.26
APP-217ENST00000548570 PPLO60437 1756 aa7.18□□□□□ -1.26
APP-217ENST00000548570 ROBO2Q9HCK4 1378 aa7.18□□□□□ -1.26
APP-217ENST00000548570 MYO5BQ9ULV0 1848 aa7.17□□□□□ -1.26
APP-217ENST00000548570 RALGAPBQ86X10 1494 aa7.17□□□□□ -1.26
APP-217ENST00000548570 ST18O60284 1047 aa7.17□□□□□ -1.26
APP-217ENST00000548570 KCNA6P17658 529 aa7.17□□□□□ -1.26
APP-217ENST00000548570 OCEL1Q9H607 264 aa7.17□□□□□ -1.26
APP-217ENST00000548570 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.17□□□□□ -1.26
APP-217ENST00000548570 ZNF335Q9H4Z2 1342 aaPredicted RBP7.17□□□□□ -1.26
APP-217ENST00000548570 LRPPRCP42704 1394 aaKnown RBP7.17□□□□□ -1.26
APP-217ENST00000548570 ABCC11Q96J66 1382 aa7.17□□□□□ -1.26
APP-217ENST00000548570 PLEKHH1Q9ULM0 1364 aa7.17□□□□□ -1.26
APP-217ENST00000548570 TECPR2O15040 1411 aa7.17□□□□□ -1.26
APP-217ENST00000548570 SETD1AO15047 1707 aaKnown RBP7.16□□□□□ -1.26
APP-217ENST00000548570 KIF1BO60333 1816 aa7.16□□□□□ -1.26
APP-217ENST00000548570 AMOTL2Q9Y2J4 779 aa7.16□□□□□ -1.26
APP-217ENST00000548570 SETD1BQ9UPS6 1966 aaKnown RBP7.16□□□□□ -1.26
APP-217ENST00000548570 YTHDC2Q9H6S0 1430 aaKnown RBP7.16□□□□□ -1.26
APP-217ENST00000548570 IQGAP1P46940 1657 aa7.16□□□□□ -1.26
APP-217ENST00000548570 DCAF8Q5TAQ9 597 aa7.15□□□□□ -1.26
APP-217ENST00000548570 WAPLQ7Z5K2 1190 aa7.15□□□□□ -1.26
APP-217ENST00000548570 RBM33Q96EV2 1170 aaKnown RBP7.15□□□□□ -1.26
APP-217ENST00000548570 BCANQ96GW7 911 aa7.15□□□□□ -1.26
APP-217ENST00000548570 STK26Q9P289 416 aa7.15□□□□□ -1.26
APP-217ENST00000548570 ROCK2O75116 1388 aaKnown RBP7.15□□□□□ -1.26
APP-217ENST00000548570 PIK3R4Q99570 1358 aa7.15□□□□□ -1.26
APP-217ENST00000548570 IRX5P78411 483 aaPredicted RBP7.14□□□□□ -1.27
APP-217ENST00000548570 TRPM1Q7Z4N2 1603 aa7.14□□□□□ -1.27
APP-217ENST00000548570 LTBP4Q8N2S1 1624 aa7.14□□□□□ -1.27
APP-217ENST00000548570 TESK2Q96S53 571 aa7.14□□□□□ -1.27
APP-217ENST00000548570 CARD11Q9BXL7 1154 aa7.14□□□□□ -1.27
APP-217ENST00000548570 TRAK1Q9UPV9 953 aa7.14□□□□□ -1.27
APP-217ENST00000548570 DIP2AQ14689 1571 aa7.13□□□□□ -1.27
APP-217ENST00000548570 NWD1Q149M9 1564 aa7.13□□□□□ -1.27
APP-217ENST00000548570 GOLGA2Q08379 1002 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms