RNA–Protein interactions for RNA: ENST00000548560.1

SP1-203, Transcript of Sp1 transcription factor, humanhuman

TSL 2

Gene SP1, Length 1,061 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-203ENST00000548560 NCOA3Q9Y6Q9 1424 aa12.6□□□□□ -0.39
SP1-203ENST00000548560 NALCNQ8IZF0 1738 aa12.59□□□□□ -0.39
SP1-203ENST00000548560 ASXL1Q8IXJ9 1541 aa12.59□□□□□ -0.39
SP1-203ENST00000548560 KDM2AQ9Y2K7 1162 aa12.59□□□□□ -0.39
SP1-203ENST00000548560 KIAA1210Q9ULL0 1709 aa12.59□□□□□ -0.39
SP1-203ENST00000548560 PIP4K2BP78356 416 aa12.58□□□□□ -0.4
SP1-203ENST00000548560 RBM33Q96EV2 1170 aaKnown RBP12.58□□□□□ -0.4
SP1-203ENST00000548560 PRAG1Q86YV5 1406 aa12.57□□□□□ -0.4
SP1-203ENST00000548560 NEUROD1Q13562 356 aa12.56□□□□□ -0.4
SP1-203ENST00000548560 YTHDC2Q9H6S0 1430 aaKnown RBP12.55□□□□□ -0.4
SP1-203ENST00000548560 SIN3AQ96ST3 1273 aa12.55□□□□□ -0.4
SP1-203ENST00000548560 C14orf93Q9H972 538 aaKnown RBP12.55□□□□□ -0.4
SP1-203ENST00000548560 LRPPRCP42704 1394 aaKnown RBP12.55□□□□□ -0.4
SP1-203ENST00000548560 ROBO1Q9Y6N7 1651 aa12.54□□□□□ -0.4
SP1-203ENST00000548560 TECPR2O15040 1411 aa12.54□□□□□ -0.4
SP1-203ENST00000548560 DCCP43146 1447 aa12.54□□□□□ -0.4
SP1-203ENST00000548560 ADGRL3Q9HAR2 1447 aa12.54□□□□□ -0.4
SP1-203ENST00000548560 ATF3P18847 181 aa12.54□□□□□ -0.4
SP1-203ENST00000548560 CFAP70Q5T0N1 1121 aa12.54□□□□□ -0.4
SP1-203ENST00000548560 TONSLQ96HA7 1378 aa12.54□□□□□ -0.4
SP1-203ENST00000548560 ROBO2Q9HCK4 1378 aa12.54□□□□□ -0.4
SP1-203ENST00000548560 TMEM132EQ6IEE7 984 aa12.53□□□□□ -0.4
SP1-203ENST00000548560 CADPS2Q86UW7 1296 aa12.53□□□□□ -0.4
SP1-203ENST00000548560 C19orf44Q9H6X5 657 aa12.53□□□□□ -0.4
SP1-203ENST00000548560 STK26Q9P289 416 aa12.53□□□□□ -0.4
SP1-203ENST00000548560 ARHGEF28Q8N1W1 1705 aaKnown RBP12.53□□□□□ -0.4
SP1-203ENST00000548560 ADGRB1O14514 1584 aa12.52□□□□□ -0.4
SP1-203ENST00000548560 SPINK5Q9NQ38 1064 aaPredicted RBP12.52□□□□□ -0.41
SP1-203ENST00000548560 ABCC11Q96J66 1382 aa12.52□□□□□ -0.41
SP1-203ENST00000548560 DLC1Q96QB1 1528 aa12.52□□□□□ -0.41
SP1-203ENST00000548560 TRPM1Q7Z4N2 1603 aa12.51□□□□□ -0.41
SP1-203ENST00000548560 L3MBTL2Q969R5 705 aa12.51□□□□□ -0.41
SP1-203ENST00000548560 CDC42BPGQ6DT37 1551 aa12.51□□□□□ -0.41
SP1-203ENST00000548560 FAM135BQ49AJ0 1406 aa12.5□□□□□ -0.41
SP1-203ENST00000548560 PHLPP1O60346 1717 aa12.5□□□□□ -0.41
SP1-203ENST00000548560 MKRN4PQ13434 485 aaPredicted RBP12.48□□□□□ -0.41
SP1-203ENST00000548560 SLAIN2Q9P270 581 aa12.48□□□□□ -0.41
SP1-203ENST00000548560 FMN2Q9NZ56 1722 aa12.48□□□□□ -0.41
SP1-203ENST00000548560 CLSPNQ9HAW4 1339 aa12.47□□□□□ -0.41
SP1-203ENST00000548560 CAPN15O75808 1086 aa12.47□□□□□ -0.41
SP1-203ENST00000548560 POGKQ9P215 609 aa12.47□□□□□ -0.41
SP1-203ENST00000548560 MST1RQ04912 1400 aa12.46□□□□□ -0.41
SP1-203ENST00000548560 PLEKHH1Q9ULM0 1364 aa12.46□□□□□ -0.41
SP1-203ENST00000548560 WAPLQ7Z5K2 1190 aa12.46□□□□□ -0.41
SP1-203ENST00000548560 SIRT1Q96EB6 747 aa12.46□□□□□ -0.41
SP1-203ENST00000548560 TRAK1Q9UPV9 953 aa12.46□□□□□ -0.41
SP1-203ENST00000548560 ADGRB2O60241 1585 aa12.46□□□□□ -0.42
SP1-203ENST00000548560 NHSL1Q5SYE7 1610 aa12.45□□□□□ -0.42
SP1-203ENST00000548560 CCER1Q8TC90 406 aaPredicted RBP12.45□□□□□ -0.42
SP1-203ENST00000548560 PRAM1Q96QH2 718 aa12.45□□□□□ -0.42
SP1-203ENST00000548560 RGPD8O14715 1765 aaPredicted RBP12.45□□□□□ -0.42
SP1-203ENST00000548560 QRICH2Q9H0J4 1663 aa12.45□□□□□ -0.42
SP1-203ENST00000548560 ROCK2O75116 1388 aaKnown RBP12.44□□□□□ -0.42
SP1-203ENST00000548560 SAFB2Q14151 953 aaKnown RBP eCLIP12.44□□□□□ -0.42
SP1-203ENST00000548560 POLA2Q14181 598 aa12.44□□□□□ -0.42
SP1-203ENST00000548560 RGS17Q9UGC6 210 aaPredicted RBP12.44□□□□□ -0.42
SP1-203ENST00000548560 AHDC1Q5TGY3 1603 aaPredicted RBP12.44□□□□□ -0.42
SP1-203ENST00000548560 ITSN1Q15811 1721 aa12.43□□□□□ -0.42
SP1-203ENST00000548560 KIF1AQ12756 1690 aa12.43□□□□□ -0.42
SP1-203ENST00000548560 C1orf167Q5SNV9 1468 aa12.43□□□□□ -0.42
SP1-203ENST00000548560 DSG3P32926 999 aa12.43□□□□□ -0.42
SP1-203ENST00000548560 COL16A1Q07092 1604 aaPredicted RBP12.42□□□□□ -0.42
SP1-203ENST00000548560 RALGAPBQ86X10 1494 aa12.41□□□□□ -0.42
SP1-203ENST00000548560 NBPF1Q3BBV0 1214 aa12.41□□□□□ -0.42
SP1-203ENST00000548560 EIF3AQ14152 1382 aaKnown RBP12.41□□□□□ -0.42
SP1-203ENST00000548560 VASPP50552 380 aaPredicted RBP12.4□□□□□ -0.42
SP1-203ENST00000548560 BRINP3Q76B58 766 aa12.4□□□□□ -0.42
SP1-203ENST00000548560 MINK1Q8N4C8 1332 aaPredicted RBP12.39□□□□□ -0.43
SP1-203ENST00000548560 PROM2Q8N271 834 aa12.39□□□□□ -0.43
SP1-203ENST00000548560 SHPRHQ149N8 1683 aa12.38□□□□□ -0.43
SP1-203ENST00000548560 TULP4Q9NRJ4 1543 aa12.38□□□□□ -0.43
SP1-203ENST00000548560 NUTM2FA1L443 756 aa12.38□□□□□ -0.43
SP1-203ENST00000548560 NBPF8Q3BBV2 869 aa12.38□□□□□ -0.43
SP1-203ENST00000548560 CENPJQ9HC77 1338 aaPredicted RBP12.37□□□□□ -0.43
SP1-203ENST00000548560 USP32Q8NFA0 1604 aa12.37□□□□□ -0.43
SP1-203ENST00000548560 ESCO1Q5FWF5 840 aa12.37□□□□□ -0.43
SP1-203ENST00000548560 HIRIP3Q9BW71 556 aaPredicted RBP12.37□□□□□ -0.43
SP1-203ENST00000548560 TIMELESSQ9UNS1 1208 aa12.37□□□□□ -0.43
SP1-203ENST00000548560 GPRASP1Q5JY77 1395 aa12.37□□□□□ -0.43
SP1-203ENST00000548560 ANKARQ7Z5J8 1434 aa12.37□□□□□ -0.43
SP1-203ENST00000548560 CARD11Q9BXL7 1154 aa12.36□□□□□ -0.43
SP1-203ENST00000548560 ZBTB12Q9Y330 459 aaPredicted RBP12.36□□□□□ -0.43
SP1-203ENST00000548560 JCADQ9P266 1359 aa12.35□□□□□ -0.43
SP1-203ENST00000548560 ORAI2Q96SN7 254 aa12.35□□□□□ -0.43
SP1-203ENST00000548560 TOPAZ1Q8N9V7 1692 aa12.35□□□□□ -0.43
SP1-203ENST00000548560 NPHP3Q7Z494 1330 aa12.35□□□□□ -0.43
SP1-203ENST00000548560 WASLO00401 505 aaPredicted RBP12.34□□□□□ -0.43
SP1-203ENST00000548560 LRP6O75581 1613 aa12.33□□□□□ -0.44
SP1-203ENST00000548560 POTEAQ6S8J7 498 aa12.32□□□□□ -0.44
SP1-203ENST00000548560 DDX17Q92841 729 aaKnown RBP12.32□□□□□ -0.44
SP1-203ENST00000548560 ATP7BP35670 1465 aa12.32□□□□□ -0.44
SP1-203ENST00000548560 LRRC59Q96AG4 307 aaKnown RBP12.31□□□□□ -0.44
SP1-203ENST00000548560 PHF8Q9UPP1 1060 aa12.31□□□□□ -0.44
SP1-203ENST00000548560 PXDNQ92626 1479 aa12.3□□□□□ -0.44
SP1-203ENST00000548560 FOXO3O43524 673 aa12.3□□□□□ -0.44
SP1-203ENST00000548560 SRPK2P78362 688 aaKnown RBP12.3□□□□□ -0.44
SP1-203ENST00000548560 CDK19Q9BWU1 502 aa12.3□□□□□ -0.44
SP1-203ENST00000548560 SOS2Q07890 1332 aaPredicted RBP12.3□□□□□ -0.44
SP1-203ENST00000548560 EVC2Q86UK5 1308 aa12.3□□□□□ -0.44
SP1-203ENST00000548560 SPATA31A6Q5VVP1 1343 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms