RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 NUTM2BA6NNL0 878 aaPredicted RBP8.1□□□□□ -1.11
PTCH1-216ENST00000548379 NUTM2EB1AL46 878 aaPredicted RBP8.1□□□□□ -1.11
PTCH1-216ENST00000548379 RNF40O75150 1001 aa8.1□□□□□ -1.11
PTCH1-216ENST00000548379 NUTM2DQ5VT03 806 aaPredicted RBP8.1□□□□□ -1.11
PTCH1-216ENST00000548379 NUTM2AQ8IVF1 878 aaPredicted RBP8.1□□□□□ -1.11
PTCH1-216ENST00000548379 AP1G2O75843 785 aa8.09□□□□□ -1.11
PTCH1-216ENST00000548379 USP17L8P0C7I0 530 aa8.09□□□□□ -1.11
PTCH1-216ENST00000548379 PRR14Q9BWN1 585 aa8.09□□□□□ -1.11
PTCH1-216ENST00000548379 TSR3Q9UJK0 312 aaKnown RBP8.09□□□□□ -1.11
PTCH1-216ENST00000548379 CFAP99D6REC4 459 aa8.08□□□□□ -1.12
PTCH1-216ENST00000548379 BCAMP50895 628 aa8.08□□□□□ -1.12
PTCH1-216ENST00000548379 APLP1P51693 650 aa8.08□□□□□ -1.12
PTCH1-216ENST00000548379 PROSER2Q86WR7 435 aaPredicted RBP8.08□□□□□ -1.12
PTCH1-216ENST00000548379 ARXQ96QS3 562 aa8.08□□□□□ -1.12
PTCH1-216ENST00000548379 HPS5Q9UPZ3 1129 aa8.08□□□□□ -1.12
PTCH1-216ENST00000548379 SLC27A5Q9Y2P5 690 aa8.08□□□□□ -1.12
PTCH1-216ENST00000548379 GOLGA8CPA6NN73 597 aa8.07□□□□□ -1.12
PTCH1-216ENST00000548379 WNT2BQ93097 391 aa8.07□□□□□ -1.12
PTCH1-216ENST00000548379 GJD4Q96KN9 370 aaPredicted RBP8.07□□□□□ -1.12
PTCH1-216ENST00000548379 STAC3Q96MF2 364 aa8.07□□□□□ -1.12
PTCH1-216ENST00000548379 SALL2Q9Y467 1007 aaPredicted RBP8.07□□□□□ -1.12
PTCH1-216ENST00000548379 RAD21O60216 631 aa8.06□□□□□ -1.12
PTCH1-216ENST00000548379 PPP4CP60510 307 aa8.06□□□□□ -1.12
PTCH1-216ENST00000548379 CTDSPL2Q05D32 466 aa8.06□□□□□ -1.12
PTCH1-216ENST00000548379 PUS10Q3MIT2 529 aaKnown RBP8.06□□□□□ -1.12
PTCH1-216ENST00000548379 SYMPKQ92797 1274 aaKnown RBP8.06□□□□□ -1.12
PTCH1-216ENST00000548379 C6orf229H3BNL8 230 aa8.05□□□□□ -1.12
PTCH1-216ENST00000548379 Q3C1V9 767 aa8.05□□□□□ -1.12
PTCH1-216ENST00000548379 RETREG3Q86VR2 466 aa8.05□□□□□ -1.12
PTCH1-216ENST00000548379 APBB1O00213 710 aa8.04□□□□□ -1.12
PTCH1-216ENST00000548379 GPR37L1O60883 481 aa8.04□□□□□ -1.12
PTCH1-216ENST00000548379 DESI1Q6ICB0 168 aa8.04□□□□□ -1.12
PTCH1-216ENST00000548379 BRICD5Q6PL45 260 aa8.04□□□□□ -1.12
PTCH1-216ENST00000548379 HELBQ8NG08 1087 aaPredicted RBP8.04□□□□□ -1.12
PTCH1-216ENST00000548379 THAP11Q96EK4 314 aa8.04□□□□□ -1.12
PTCH1-216ENST00000548379 THSD4Q6ZMP0 1018 aa8.03□□□□□ -1.12
PTCH1-216ENST00000548379 PRR7Q8TB68 274 aa8.03□□□□□ -1.12
PTCH1-216ENST00000548379 TRIM34Q9BYJ4 488 aa8.03□□□□□ -1.12
PTCH1-216ENST00000548379 GDPD2Q9HCC8 539 aa8.03□□□□□ -1.12
PTCH1-216ENST00000548379 HMX1Q9NP08 348 aaPredicted RBP8.03□□□□□ -1.12
PTCH1-216ENST00000548379 ARID3CA6NKF2 412 aa8.02□□□□□ -1.13
PTCH1-216ENST00000548379 BLOC1S3Q6QNY0 202 aa8.02□□□□□ -1.13
PTCH1-216ENST00000548379 RNF19BQ6ZMZ0 732 aa8.02□□□□□ -1.13
PTCH1-216ENST00000548379 WBP1LQ9NX94 342 aa8.02□□□□□ -1.13
PTCH1-216ENST00000548379 TBC1D2BQ9UPU7 963 aa8.02□□□□□ -1.13
PTCH1-216ENST00000548379 SCUBE3Q8IX30 993 aa8.01□□□□□ -1.13
PTCH1-216ENST00000548379 LRRN4Q8WUT4 740 aa8.01□□□□□ -1.13
PTCH1-216ENST00000548379 PCDHB3Q9Y5E6 796 aa8.01□□□□□ -1.13
PTCH1-216ENST00000548379 PRM3Q9NNZ6 103 aa8□□□□□ -1.13
PTCH1-216ENST00000548379 PER1O15534 1290 aaPredicted RBP7.99□□□□□ -1.13
PTCH1-216ENST00000548379 NR1I2O75469 434 aa7.99□□□□□ -1.13
PTCH1-216ENST00000548379 IRF5Q13568 498 aa7.99□□□□□ -1.13
PTCH1-216ENST00000548379 LYPD8Q6UX82 237 aa7.99□□□□□ -1.13
PTCH1-216ENST00000548379 NYAP1Q6ZVC0 841 aa7.99□□□□□ -1.13
PTCH1-216ENST00000548379 CDAN1Q8IWY9 1227 aa7.99□□□□□ -1.13
PTCH1-216ENST00000548379 USB1Q9BQ65 265 aaKnown RBP7.99□□□□□ -1.13
PTCH1-216ENST00000548379 NDUFB9Q9Y6M9 179 aa7.99□□□□□ -1.13
PTCH1-216ENST00000548379 FMNL1O95466 1100 aaPredicted RBP7.98□□□□□ -1.13
PTCH1-216ENST00000548379 ZNF777Q9ULD5 760 aaPredicted RBP7.98□□□□□ -1.13
PTCH1-216ENST00000548379 EPS8L1Q8TE68 723 aa7.97□□□□□ -1.13
PTCH1-216ENST00000548379 KCTD12Q96CX2 325 aaKnown RBP7.97□□□□□ -1.13
PTCH1-216ENST00000548379 ZNF330Q9Y3S2 320 aaPredicted RBP7.97□□□□□ -1.13
PTCH1-216ENST00000548379 ABL2P42684 1182 aa7.96□□□□□ -1.14
PTCH1-216ENST00000548379 MSS51Q4VC12 460 aa7.96□□□□□ -1.14
PTCH1-216ENST00000548379 HOMEZQ8IX15 550 aa7.96□□□□□ -1.14
PTCH1-216ENST00000548379 TSC1Q92574 1164 aa7.96□□□□□ -1.14
PTCH1-216ENST00000548379 CCDC82Q8N4S0 544 aa7.95□□□□□ -1.14
PTCH1-216ENST00000548379 FAM160A2Q8N612 972 aaPredicted RBP7.95□□□□□ -1.14
PTCH1-216ENST00000548379 F12P00748 615 aaPredicted RBP7.94□□□□□ -1.14
PTCH1-216ENST00000548379 JUNDP17535 347 aa7.94□□□□□ -1.14
PTCH1-216ENST00000548379 NR6A1Q15406 480 aa7.94□□□□□ -1.14
PTCH1-216ENST00000548379 POM121CA8CG34 1229 aa7.93□□□□□ -1.14
PTCH1-216ENST00000548379 DXOO77932 396 aaKnown RBP7.93□□□□□ -1.14
PTCH1-216ENST00000548379 MMP16P51512 607 aa7.93□□□□□ -1.14
PTCH1-216ENST00000548379 PTPRNQ16849 979 aa7.93□□□□□ -1.14
PTCH1-216ENST00000548379 WWC1Q8IX03 1113 aa7.93□□□□□ -1.14
PTCH1-216ENST00000548379 ZPR1O75312 459 aa7.92□□□□□ -1.14
PTCH1-216ENST00000548379 WASHC4Q2M389 1173 aa7.92□□□□□ -1.14
PTCH1-216ENST00000548379 TJAP1Q5JTD0 557 aa7.92□□□□□ -1.14
PTCH1-216ENST00000548379 SPSB2Q99619 263 aa7.92□□□□□ -1.14
PTCH1-216ENST00000548379 COPS2P61201 443 aa7.91□□□□□ -1.14
PTCH1-216ENST00000548379 MTRQ99707 1265 aa7.91□□□□□ -1.14
PTCH1-216ENST00000548379 ADH1BP00325 375 aa7.9□□□□□ -1.14
PTCH1-216ENST00000548379 ADAMTS19Q8TE59 1207 aa7.9□□□□□ -1.14
PTCH1-216ENST00000548379 SERPINA10Q9UK55 444 aa7.9□□□□□ -1.14
PTCH1-216ENST00000548379 ARID3AQ99856 593 aa7.89□□□□□ -1.15
PTCH1-216ENST00000548379 EVA1BQ9NVM1 165 aa7.89□□□□□ -1.15
PTCH1-216ENST00000548379 MYT1LQ9UL68 1186 aa7.89□□□□□ -1.15
PTCH1-216ENST00000548379 GLMNQ92990 594 aa7.88□□□□□ -1.15
PTCH1-216ENST00000548379 IL21Q9HBE4 155 aa7.88□□□□□ -1.15
PTCH1-216ENST00000548379 PRDM9Q9NQV7 894 aa7.88□□□□□ -1.15
PTCH1-216ENST00000548379 MAP10Q9P2G4 905 aa7.88□□□□□ -1.15
PTCH1-216ENST00000548379 ZC3H4Q9UPT8 1303 aaKnown RBP7.87□□□□□ -1.15
PTCH1-216ENST00000548379 TLL1O43897 1013 aa7.87□□□□□ -1.15
PTCH1-216ENST00000548379 PTPN5P54829 565 aa7.87□□□□□ -1.15
PTCH1-216ENST00000548379 ZNF516Q92618 1163 aa7.87□□□□□ -1.15
PTCH1-216ENST00000548379 ALG2Q9H553 416 aa7.87□□□□□ -1.15
PTCH1-216ENST00000548379 FKBPLQ9UIM3 349 aa7.87□□□□□ -1.15
PTCH1-216ENST00000548379 CCNYL3P0C7X3 344 aa7.86□□□□□ -1.15
PTCH1-216ENST00000548379 VAC14Q08AM6 782 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms