RNA–Protein interactions for RNA: ENST00000548316.1

PDZRN4-204, Transcript of PDZ domain containing ring finger 4, humanhuman

TSL 1 (best)

Gene PDZRN4, Length 2,971 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4-204ENST00000548316 NCBP3Q53F19 620 aaKnown RBP9.42□□□□□ -0.9
PDZRN4-204ENST00000548316 MYT1LQ9UL68 1186 aa9.42□□□□□ -0.9
PDZRN4-204ENST00000548316 CENPJQ9HC77 1338 aaPredicted RBP9.42□□□□□ -0.9
PDZRN4-204ENST00000548316 NSD3Q9BZ95 1437 aa9.42□□□□□ -0.9
PDZRN4-204ENST00000548316 PTPRMP28827 1452 aa9.42□□□□□ -0.9
PDZRN4-204ENST00000548316 NLRP1Q9C000 1473 aa9.42□□□□□ -0.9
PDZRN4-204ENST00000548316 DMRT2Q9Y5R5 561 aa9.42□□□□□ -0.9
PDZRN4-204ENST00000548316 CDC42BPGQ6DT37 1551 aa9.41□□□□□ -0.9
PDZRN4-204ENST00000548316 MED14O60244 1454 aa9.41□□□□□ -0.9
PDZRN4-204ENST00000548316 RIMBP3CA6NJZ7 1639 aa9.41□□□□□ -0.9
PDZRN4-204ENST00000548316 RIMBP3BA6NNM3 1639 aa9.41□□□□□ -0.9
PDZRN4-204ENST00000548316 RIMBP3Q9UFD9 1639 aa9.41□□□□□ -0.9
PDZRN4-204ENST00000548316 WDR43Q15061 677 aaKnown RBP eCLIP9.4□□□□□ -0.9
PDZRN4-204ENST00000548316 CD163L1Q9NR16 1453 aa9.4□□□□□ -0.9
PDZRN4-204ENST00000548316 NSD2O96028 1365 aa9.39□□□□□ -0.91
PDZRN4-204ENST00000548316 NINLQ9Y2I6 1382 aa9.39□□□□□ -0.91
PDZRN4-204ENST00000548316 CENPQQ7L2Z9 268 aaPredicted RBP9.39□□□□□ -0.91
PDZRN4-204ENST00000548316 ANKRD36BQ8N2N9 1353 aa9.38□□□□□ -0.91
PDZRN4-204ENST00000548316 E9PSI1 815 aa9.38□□□□□ -0.91
PDZRN4-204ENST00000548316 ANP32AP39687 249 aaKnown RBP9.38□□□□□ -0.91
PDZRN4-204ENST00000548316 APAF1O14727 1248 aa9.37□□□□□ -0.91
PDZRN4-204ENST00000548316 AGLP35573 1532 aa9.37□□□□□ -0.91
PDZRN4-204ENST00000548316 DLC1Q96QB1 1528 aa9.37□□□□□ -0.91
PDZRN4-204ENST00000548316 SKAP1Q86WV1 359 aa9.37□□□□□ -0.91
PDZRN4-204ENST00000548316 CCDC146Q8IYE0 955 aa9.37□□□□□ -0.91
PDZRN4-204ENST00000548316 NRXN3Q9Y4C0 1643 aa9.37□□□□□ -0.91
PDZRN4-204ENST00000548316 ALKQ9UM73 1620 aa9.36□□□□□ -0.91
PDZRN4-204ENST00000548316 CCDC27Q2M243 656 aa9.36□□□□□ -0.91
PDZRN4-204ENST00000548316 C8orf34Q49A92 452 aa9.36□□□□□ -0.91
PDZRN4-204ENST00000548316 YEATS2Q9ULM3 1422 aa9.36□□□□□ -0.91
PDZRN4-204ENST00000548316 KNDC1Q76NI1 1749 aa9.36□□□□□ -0.91
PDZRN4-204ENST00000548316 ERICH6Q7L0X2 663 aa9.36□□□□□ -0.91
PDZRN4-204ENST00000548316 ABCC11Q96J66 1382 aa9.36□□□□□ -0.91
PDZRN4-204ENST00000548316 WWC1Q8IX03 1113 aa9.36□□□□□ -0.91
PDZRN4-204ENST00000548316 SPATA31D1Q6ZQQ2 1576 aa9.35□□□□□ -0.91
PDZRN4-204ENST00000548316 DIP2BQ9P265 1576 aa9.35□□□□□ -0.91
PDZRN4-204ENST00000548316 BCL11AQ9H165 835 aa9.35□□□□□ -0.91
PDZRN4-204ENST00000548316 ARHGEF40Q8TER5 1519 aa9.35□□□□□ -0.91
PDZRN4-204ENST00000548316 ZMYM3Q14202 1370 aa9.34□□□□□ -0.91
PDZRN4-204ENST00000548316 PDE3AQ14432 1141 aa9.34□□□□□ -0.91
PDZRN4-204ENST00000548316 SLC12A5Q9H2X9 1139 aa9.34□□□□□ -0.91
PDZRN4-204ENST00000548316 BCAR3O75815 825 aa9.33□□□□□ -0.92
PDZRN4-204ENST00000548316 AKAP12Q02952 1782 aa9.33□□□□□ -0.92
PDZRN4-204ENST00000548316 ZBTB47Q9UFB7 747 aaPredicted RBP9.33□□□□□ -0.92
PDZRN4-204ENST00000548316 MON2Q7Z3U7 1717 aa9.33□□□□□ -0.92
PDZRN4-204ENST00000548316 WDR63Q8IWG1 891 aa9.33□□□□□ -0.92
PDZRN4-204ENST00000548316 OSCARQ8IYS5 282 aa9.33□□□□□ -0.92
PDZRN4-204ENST00000548316 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.33□□□□□ -0.92
PDZRN4-204ENST00000548316 RUNDC1Q96C34 613 aa9.33□□□□□ -0.92
PDZRN4-204ENST00000548316 TRAK1Q9UPV9 953 aa9.32□□□□□ -0.92
PDZRN4-204ENST00000548316 DEKP35659 375 aaKnown RBP9.32□□□□□ -0.92
PDZRN4-204ENST00000548316 TMEM132EQ6IEE7 984 aa9.32□□□□□ -0.92
PDZRN4-204ENST00000548316 USP19O94966 1318 aa9.32□□□□□ -0.92
PDZRN4-204ENST00000548316 A0A1W2PP64 1363 aa9.32□□□□□ -0.92
PDZRN4-204ENST00000548316 PNPLA6Q8IY17 1366 aa9.32□□□□□ -0.92
PDZRN4-204ENST00000548316 YTHDC2Q9H6S0 1430 aaKnown RBP9.31□□□□□ -0.92
PDZRN4-204ENST00000548316 CGNL1Q0VF96 1302 aa9.31□□□□□ -0.92
PDZRN4-204ENST00000548316 IGHDP01880 384 aa9.3□□□□□ -0.92
PDZRN4-204ENST00000548316 PLEKHF1Q96S99 279 aa9.3□□□□□ -0.92
PDZRN4-204ENST00000548316 EVC2Q86UK5 1308 aa9.3□□□□□ -0.92
PDZRN4-204ENST00000548316 RARSP54136 660 aaKnown RBP9.3□□□□□ -0.92
PDZRN4-204ENST00000548316 IDI1Q13907 227 aa9.3□□□□□ -0.92
PDZRN4-204ENST00000548316 FAM161AQ3B820 660 aa9.3□□□□□ -0.92
PDZRN4-204ENST00000548316 MORC1Q86VD1 984 aa9.3□□□□□ -0.92
PDZRN4-204ENST00000548316 MAP2P11137 1827 aaKnown RBP9.3□□□□□ -0.92
PDZRN4-204ENST00000548316 VGFO15240 615 aaPredicted RBP9.3□□□□□ -0.92
PDZRN4-204ENST00000548316 RAPGEF3O95398 923 aa9.29□□□□□ -0.92
PDZRN4-204ENST00000548316 SLC52A1Q9NWF4 448 aa9.29□□□□□ -0.92
PDZRN4-204ENST00000548316 DLG5Q8TDM6 1919 aa9.29□□□□□ -0.92
PDZRN4-204ENST00000548316 C3P01024 1663 aa9.29□□□□□ -0.92
PDZRN4-204ENST00000548316 A2ML1A8K2U0 1454 aa9.29□□□□□ -0.92
PDZRN4-204ENST00000548316 AAMPQ13685 434 aa9.29□□□□□ -0.92
PDZRN4-204ENST00000548316 GGT6Q6P531 493 aa9.29□□□□□ -0.92
PDZRN4-204ENST00000548316 TCP11L2Q8N4U5 519 aa9.29□□□□□ -0.92
PDZRN4-204ENST00000548316 NRKQ7Z2Y5 1582 aa9.28□□□□□ -0.92
PDZRN4-204ENST00000548316 TOPAZ1Q8N9V7 1692 aa9.28□□□□□ -0.92
PDZRN4-204ENST00000548316 LRRC7Q96NW7 1537 aa9.28□□□□□ -0.92
PDZRN4-204ENST00000548316 ATP7BP35670 1465 aa9.28□□□□□ -0.92
PDZRN4-204ENST00000548316 NPM1P06748 294 aaKnown RBP eCLIP9.28□□□□□ -0.92
PDZRN4-204ENST00000548316 MTHFSP49914 203 aa9.28□□□□□ -0.92
PDZRN4-204ENST00000548316 KIF13AQ9H1H9 1805 aa9.28□□□□□ -0.92
PDZRN4-204ENST00000548316 ATAD2Q6PL18 1390 aa9.27□□□□□ -0.93
PDZRN4-204ENST00000548316 DDRGK1Q96HY6 314 aa9.27□□□□□ -0.93
PDZRN4-204ENST00000548316 USP35Q9P2H5 1018 aa9.27□□□□□ -0.93
PDZRN4-204ENST00000548316 RLBP1P12271 317 aa9.27□□□□□ -0.93
PDZRN4-204ENST00000548316 CPS1P31327 1500 aa9.26□□□□□ -0.93
PDZRN4-204ENST00000548316 CLUAP1Q96AJ1 413 aa9.26□□□□□ -0.93
PDZRN4-204ENST00000548316 PPIP5K1Q6PFW1 1433 aa9.26□□□□□ -0.93
PDZRN4-204ENST00000548316 NALCNQ8IZF0 1738 aa9.26□□□□□ -0.93
PDZRN4-204ENST00000548316 TNNQ9UQP3 1299 aa9.26□□□□□ -0.93
PDZRN4-204ENST00000548316 ITSN1Q15811 1721 aa9.26□□□□□ -0.93
PDZRN4-204ENST00000548316 TRIM35Q9UPQ4 493 aa9.25□□□□□ -0.93
PDZRN4-204ENST00000548316 IL16Q14005 1332 aa9.25□□□□□ -0.93
PDZRN4-204ENST00000548316 FAM135BQ49AJ0 1406 aa9.25□□□□□ -0.93
PDZRN4-204ENST00000548316 CT47B1P0C2W7 299 aaPredicted RBP9.25□□□□□ -0.93
PDZRN4-204ENST00000548316 PANK1Q8TE04 598 aa9.25□□□□□ -0.93
PDZRN4-204ENST00000548316 CPSF1Q10570 1443 aaKnown RBP9.25□□□□□ -0.93
PDZRN4-204ENST00000548316 CHGAP10645 457 aaKnown RBP9.24□□□□□ -0.93
PDZRN4-204ENST00000548316 NBR1Q14596 966 aa9.24□□□□□ -0.93
PDZRN4-204ENST00000548316 NPM2Q86SE8 214 aaKnown RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms