RNA–Protein interactions for RNA: ENST00000548313.5

DEPDC4-205, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 389 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-205ENST00000548313 PLA2G2CQ5R387 149 aa9.23□□□□□ -0.93
DEPDC4-205ENST00000548313 TREML4Q6UXN2 200 aa9.23□□□□□ -0.93
DEPDC4-205ENST00000548313 SPSB2Q99619 263 aa9.23□□□□□ -0.93
DEPDC4-205ENST00000548313 RPIAP49247 311 aa9.22□□□□□ -0.93
DEPDC4-205ENST00000548313 DDRGK1Q96HY6 314 aa9.22□□□□□ -0.93
DEPDC4-205ENST00000548313 DDX11L8A8MPP1 907 aa9.21□□□□□ -0.94
DEPDC4-205ENST00000548313 ST8SIA5O15466 376 aa9.21□□□□□ -0.94
DEPDC4-205ENST00000548313 FOXC1Q12948 553 aa9.21□□□□□ -0.94
DEPDC4-205ENST00000548313 MS4A1P11836 297 aa9.2□□□□□ -0.94
DEPDC4-205ENST00000548313 CD46P15529 392 aa9.2□□□□□ -0.94
DEPDC4-205ENST00000548313 CRIPAKQ8N1N5 446 aa9.2□□□□□ -0.94
DEPDC4-205ENST00000548313 PKD2L1Q9P0L9 805 aa9.2□□□□□ -0.94
DEPDC4-205ENST00000548313 CD2BP2O95400 341 aaKnown RBP9.19□□□□□ -0.94
DEPDC4-205ENST00000548313 PUS10Q3MIT2 529 aaKnown RBP9.19□□□□□ -0.94
DEPDC4-205ENST00000548313 RDH13Q8NBN7 331 aa9.18□□□□□ -0.94
DEPDC4-205ENST00000548313 DIXDC1Q155Q3 683 aa9.17□□□□□ -0.94
DEPDC4-205ENST00000548313 BEGAINQ9BUH8 593 aa9.17□□□□□ -0.94
DEPDC4-205ENST00000548313 FAM117AQ9C073 453 aa9.17□□□□□ -0.94
DEPDC4-205ENST00000548313 AVPP01185 164 aa9.16□□□□□ -0.94
DEPDC4-205ENST00000548313 GCGRP47871 477 aa9.16□□□□□ -0.94
DEPDC4-205ENST00000548313 LCE2AQ5TA79 106 aaPredicted RBP9.16□□□□□ -0.94
DEPDC4-205ENST00000548313 CYP4X1Q8N118 509 aa9.16□□□□□ -0.94
DEPDC4-205ENST00000548313 CTC1Q2NKJ3 1217 aa9.15□□□□□ -0.94
DEPDC4-205ENST00000548313 TOR4AQ9NXH8 423 aa9.15□□□□□ -0.94
DEPDC4-205ENST00000548313 AXIN1O15169 862 aa9.14□□□□□ -0.95
DEPDC4-205ENST00000548313 TMEM132AQ24JP5 1023 aa9.14□□□□□ -0.95
DEPDC4-205ENST00000548313 IL27Q8NEV9 243 aa9.14□□□□□ -0.95
DEPDC4-205ENST00000548313 RSPH6AQ9H0K4 717 aa9.14□□□□□ -0.95
DEPDC4-205ENST00000548313 FMNL1O95466 1100 aaPredicted RBP9.13□□□□□ -0.95
DEPDC4-205ENST00000548313 USP46P62068 366 aa9.13□□□□□ -0.95
DEPDC4-205ENST00000548313 MORN1Q5T089 497 aa9.13□□□□□ -0.95
DEPDC4-205ENST00000548313 NUTM1Q86Y26 1132 aa9.13□□□□□ -0.95
DEPDC4-205ENST00000548313 FCF1Q9Y324 198 aaKnown RBP9.13□□□□□ -0.95
DEPDC4-205ENST00000548313 PLEKHG3A1L390 1219 aa9.12□□□□□ -0.95
DEPDC4-205ENST00000548313 KDM4AO75164 1064 aa9.12□□□□□ -0.95
DEPDC4-205ENST00000548313 ATP6V1AP38606 617 aa9.12□□□□□ -0.95
DEPDC4-205ENST00000548313 THAP11Q96EK4 314 aa9.12□□□□□ -0.95
DEPDC4-205ENST00000548313 C11orf95C9JLR9 678 aaPredicted RBP9.11□□□□□ -0.95
DEPDC4-205ENST00000548313 WFS1O76024 890 aa9.11□□□□□ -0.95
DEPDC4-205ENST00000548313 SMCPP49901 116 aaPredicted RBP9.11□□□□□ -0.95
DEPDC4-205ENST00000548313 GRIPAP1Q4V328 841 aa9.11□□□□□ -0.95
DEPDC4-205ENST00000548313 GOPCQ9HD26 462 aa9.11□□□□□ -0.95
DEPDC4-205ENST00000548313 SALL2Q9Y467 1007 aaPredicted RBP9.11□□□□□ -0.95
DEPDC4-205ENST00000548313 ZBTB24O43167 697 aaPredicted RBP9.1□□□□□ -0.95
DEPDC4-205ENST00000548313 SPIRE2Q8WWL2 714 aa9.1□□□□□ -0.95
DEPDC4-205ENST00000548313 GMPR2Q9P2T1 348 aaKnown RBP9.1□□□□□ -0.95
DEPDC4-205ENST00000548313 DACH1Q9UI36 760 aa9.1□□□□□ -0.95
DEPDC4-205ENST00000548313 FUT2Q10981 343 aa9.09□□□□□ -0.95
DEPDC4-205ENST00000548313 FAM160A2Q8N612 972 aaPredicted RBP9.09□□□□□ -0.95
DEPDC4-205ENST00000548313 TBC1D2Q9BYX2 928 aa9.09□□□□□ -0.95
DEPDC4-205ENST00000548313 TTC24A2A3L6 582 aaPredicted RBP9.08□□□□□ -0.96
DEPDC4-205ENST00000548313 GJA5P36382 358 aa9.08□□□□□ -0.96
DEPDC4-205ENST00000548313 SH3D19Q5HYK7 790 aa9.08□□□□□ -0.96
DEPDC4-205ENST00000548313 SLC27A5Q9Y2P5 690 aa9.08□□□□□ -0.96
DEPDC4-205ENST00000548313 SKIV2LQ15477 1246 aaKnown RBP9.07□□□□□ -0.96
DEPDC4-205ENST00000548313 STK17AQ9UEE5 414 aa9.06□□□□□ -0.96
DEPDC4-205ENST00000548313 HOXA2O43364 376 aa9.05□□□□□ -0.96
DEPDC4-205ENST00000548313 MSS51Q4VC12 460 aa9.05□□□□□ -0.96
DEPDC4-205ENST00000548313 MYSM1Q5VVJ2 828 aa9.05□□□□□ -0.96
DEPDC4-205ENST00000548313 BRICD5Q6PL45 260 aa9.05□□□□□ -0.96
DEPDC4-205ENST00000548313 WNT7AO00755 349 aa9.04□□□□□ -0.96
DEPDC4-205ENST00000548313 INSM1Q01101 510 aaPredicted RBP9.04□□□□□ -0.96
DEPDC4-205ENST00000548313 TUSC1Q2TAM9 212 aa9.04□□□□□ -0.96
DEPDC4-205ENST00000548313 SNIP1Q8TAD8 396 aaKnown RBP9.04□□□□□ -0.96
DEPDC4-205ENST00000548313 SPTLC1O15269 473 aa9.03□□□□□ -0.96
DEPDC4-205ENST00000548313 WIPF1O43516 503 aa9.03□□□□□ -0.96
DEPDC4-205ENST00000548313 NFX1Q12986 1120 aaKnown RBP9.03□□□□□ -0.96
DEPDC4-205ENST00000548313 RIC3Q7Z5B4 369 aa9.03□□□□□ -0.96
DEPDC4-205ENST00000548313 MOXD2PA6NHM9 499 aa9.02□□□□□ -0.97
DEPDC4-205ENST00000548313 RSBN1LQ6PCB5 846 aaPredicted RBP9.02□□□□□ -0.97
DEPDC4-205ENST00000548313 PCMTD1Q96MG8 357 aaPredicted RBP9.02□□□□□ -0.97
DEPDC4-205ENST00000548313 PRDM9Q9NQV7 894 aa9.02□□□□□ -0.97
DEPDC4-205ENST00000548313 CLK2P49760 499 aaKnown RBP9.01□□□□□ -0.97
DEPDC4-205ENST00000548313 SENP2Q9HC62 589 aa9.01□□□□□ -0.97
DEPDC4-205ENST00000548313 POLR3EQ9NVU0 708 aa9.01□□□□□ -0.97
DEPDC4-205ENST00000548313 FDX1P10109 184 aa9□□□□□ -0.97
DEPDC4-205ENST00000548313 SMPD1P17405 629 aa9□□□□□ -0.97
DEPDC4-205ENST00000548313 NDUFV2P19404 249 aa9□□□□□ -0.97
DEPDC4-205ENST00000548313 Q3C1V9 767 aa9□□□□□ -0.97
DEPDC4-205ENST00000548313 ATP13A2Q9NQ11 1180 aa9□□□□□ -0.97
DEPDC4-205ENST00000548313 TRIM32Q13049 653 aa8.98□□□□□ -0.97
DEPDC4-205ENST00000548313 PRPF38BQ5VTL8 546 aaKnown RBP8.98□□□□□ -0.97
DEPDC4-205ENST00000548313 RNF19BQ6ZMZ0 732 aa8.98□□□□□ -0.97
DEPDC4-205ENST00000548313 LIMD1Q9UGP4 676 aa8.98□□□□□ -0.97
DEPDC4-205ENST00000548313 MMP16P51512 607 aa8.97□□□□□ -0.97
DEPDC4-205ENST00000548313 TRIM47Q96LD4 638 aa8.97□□□□□ -0.97
DEPDC4-205ENST00000548313 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.97□□□□□ -0.97
DEPDC4-205ENST00000548313 ATP1B4Q9UN42 357 aaPredicted RBP8.97□□□□□ -0.97
DEPDC4-205ENST00000548313 SPDYE5A6NIY4 337 aa8.96□□□□□ -0.98
DEPDC4-205ENST00000548313 TERTO14746 1132 aaKnown RBP8.96□□□□□ -0.98
DEPDC4-205ENST00000548313 PROCA1Q8NCQ7 364 aaPredicted RBP8.96□□□□□ -0.98
DEPDC4-205ENST00000548313 MRGPRX2Q96LB1 330 aa8.96□□□□□ -0.98
DEPDC4-205ENST00000548313 PCDHGC3Q9UN70 934 aa8.96□□□□□ -0.98
DEPDC4-205ENST00000548313 HLA-CQ95604 372 aa8.95□□□□□ -0.98
DEPDC4-205ENST00000548313 KIFC2Q96AC6 838 aa8.95□□□□□ -0.98
DEPDC4-205ENST00000548313 PCDHB15Q9Y5E8 787 aa8.95□□□□□ -0.98
DEPDC4-205ENST00000548313 J3QL48 77 aa8.94□□□□□ -0.98
DEPDC4-205ENST00000548313 LILRB3O75022 631 aa8.94□□□□□ -0.98
DEPDC4-205ENST00000548313 SNRPBP14678 240 aaKnown RBP8.94□□□□□ -0.98
DEPDC4-205ENST00000548313 GUCA2AQ02747 115 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms