RNA–Protein interactions for RNA: ENST00000548278.1

RITA1-201, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RITA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-201ENST00000548278 ANKRD36BQ8N2N9 1353 aa28.03■■■□□ 2.08
RITA1-201ENST00000548278 BCANQ96GW7 911 aa28.03■■■□□ 2.08
RITA1-201ENST00000548278 MINK1Q8N4C8 1332 aaPredicted RBP28.03■■■□□ 2.08
RITA1-201ENST00000548278 HDGFP51858 240 aaKnown RBP28.03■■■□□ 2.08
RITA1-201ENST00000548278 TMEM2Q9UHN6 1383 aa28.02■■■□□ 2.08
RITA1-201ENST00000548278 NINLQ9Y2I6 1382 aa28.02■■■□□ 2.08
RITA1-201ENST00000548278 ABCC11Q96J66 1382 aa28.01■■■□□ 2.07
RITA1-201ENST00000548278 NLRP1Q9C000 1473 aa28.01■■■□□ 2.07
RITA1-201ENST00000548278 C3P01024 1663 aa28■■■□□ 2.07
RITA1-201ENST00000548278 ADAMTS8Q9UP79 889 aa28■■■□□ 2.07
RITA1-201ENST00000548278 SRPK2P78362 688 aaKnown RBP27.99■■■□□ 2.07
RITA1-201ENST00000548278 CEBPAP49715 358 aaPredicted RBP27.99■■■□□ 2.07
RITA1-201ENST00000548278 FER1L4A9Z1Z3 1794 aa27.99■■■□□ 2.07
RITA1-201ENST00000548278 ATAD2Q6PL18 1390 aa27.98■■■□□ 2.07
RITA1-201ENST00000548278 METP08581 1390 aa27.97■■■□□ 2.07
RITA1-201ENST00000548278 WDR43Q15061 677 aaKnown RBP eCLIP27.96■■■□□ 2.07
RITA1-201ENST00000548278 CGNL1Q0VF96 1302 aa27.96■■■□□ 2.07
RITA1-201ENST00000548278 WAPLQ7Z5K2 1190 aa27.94■■■□□ 2.06
RITA1-201ENST00000548278 PLEKHH1Q9ULM0 1364 aa27.94■■■□□ 2.06
RITA1-201ENST00000548278 IRX6P78412 446 aaPredicted RBP27.93■■■□□ 2.06
RITA1-201ENST00000548278 MORC1Q86VD1 984 aa27.93■■■□□ 2.06
RITA1-201ENST00000548278 PDE3BQ13370 1112 aa27.93■■■□□ 2.06
RITA1-201ENST00000548278 CDK19Q9BWU1 502 aa27.93■■■□□ 2.06
RITA1-201ENST00000548278 SALL2Q9Y467 1007 aaPredicted RBP27.93■■■□□ 2.06
RITA1-201ENST00000548278 A0A1W2PP64 1363 aa27.92■■■□□ 2.06
RITA1-201ENST00000548278 KNDC1Q76NI1 1749 aa27.92■■■□□ 2.06
RITA1-201ENST00000548278 NSD2O96028 1365 aa27.91■■■□□ 2.06
RITA1-201ENST00000548278 ERICH6BQ5W0A0 696 aa27.9■■■□□ 2.06
RITA1-201ENST00000548278 POLR3AO14802 1390 aaPredicted RBP27.9■■■□□ 2.06
RITA1-201ENST00000548278 TECPR2O15040 1411 aa27.9■■■□□ 2.06
RITA1-201ENST00000548278 CD163L1Q9NR16 1453 aa27.9■■■□□ 2.06
RITA1-201ENST00000548278 ADAMTS13Q76LX8 1427 aa27.88■■■□□ 2.05
RITA1-201ENST00000548278 RNF123Q5XPI4 1314 aa27.88■■■□□ 2.05
RITA1-201ENST00000548278 SIRT1Q96EB6 747 aa27.87■■■□□ 2.05
RITA1-201ENST00000548278 PLEKHG1Q9ULL1 1385 aa27.87■■■□□ 2.05
RITA1-201ENST00000548278 LTKP29376 864 aa27.87■■■□□ 2.05
RITA1-201ENST00000548278 FAM135BQ49AJ0 1406 aa27.86■■■□□ 2.05
RITA1-201ENST00000548278 TERF2IPQ9NYB0 399 aa27.86■■■□□ 2.05
RITA1-201ENST00000548278 CPS1P31327 1500 aa27.85■■■□□ 2.05
RITA1-201ENST00000548278 TXNDC2Q86VQ3 553 aa27.84■■■□□ 2.05
RITA1-201ENST00000548278 SLIT1O75093 1534 aa27.83■■■□□ 2.05
RITA1-201ENST00000548278 TNNT2P45379 298 aaPredicted RBP27.83■■■□□ 2.05
RITA1-201ENST00000548278 ARHGAP23Q9P227 1491 aa27.83■■■□□ 2.05
RITA1-201ENST00000548278 CDCA7LQ96GN5 454 aa27.8■■■□□ 2.04
RITA1-201ENST00000548278 CABP1Q9NZU7 370 aa27.8■■■□□ 2.04
RITA1-201ENST00000548278 MED14O60244 1454 aa27.8■■■□□ 2.04
RITA1-201ENST00000548278 PLPPR3Q6T4P5 718 aa27.8■■■□□ 2.04
RITA1-201ENST00000548278 SHPRHQ149N8 1683 aa27.8■■■□□ 2.04
RITA1-201ENST00000548278 HDGFL2Q7Z4V5 671 aaPredicted RBP27.79■■■□□ 2.04
RITA1-201ENST00000548278 WASLO00401 505 aaPredicted RBP27.78■■■□□ 2.04
RITA1-201ENST00000548278 EID1Q9Y6B2 187 aa27.77■■■□□ 2.04
RITA1-201ENST00000548278 ANKRD26Q9UPS8 1709 aa27.77■■■□□ 2.04
RITA1-201ENST00000548278 ATP7BP35670 1465 aa27.77■■■□□ 2.04
RITA1-201ENST00000548278 MTHFSP49914 203 aa27.77■■■□□ 2.04
RITA1-201ENST00000548278 ZNF521Q96K83 1311 aa27.76■■■□□ 2.03
RITA1-201ENST00000548278 ROBO2Q9HCK4 1378 aa27.75■■■□□ 2.03
RITA1-201ENST00000548278 FYB1O15117 783 aa27.75■■■□□ 2.03
RITA1-201ENST00000548278 CCDC146Q8IYE0 955 aa27.75■■■□□ 2.03
RITA1-201ENST00000548278 THEMISQ8N1K5 641 aaPredicted RBP27.74■■■□□ 2.03
RITA1-201ENST00000548278 PPP4R2Q9NY27 417 aa27.74■■■□□ 2.03
RITA1-201ENST00000548278 GGNBP2Q9H3C7 697 aa27.73■■■□□ 2.03
RITA1-201ENST00000548278 DNAJC5Q9H3Z4 198 aa27.73■■■□□ 2.03
RITA1-201ENST00000548278 RCAN3Q9UKA8 241 aa27.71■■■□□ 2.03
RITA1-201ENST00000548278 KIF20BQ96Q89 1820 aa27.71■■■□□ 2.03
RITA1-201ENST00000548278 CFAP53Q96M91 514 aa27.7■■■□□ 2.02
RITA1-201ENST00000548278 RIMS1Q86UR5 1692 aaKnown RBP27.7■■■□□ 2.02
RITA1-201ENST00000548278 APAF1O14727 1248 aa27.69■■■□□ 2.02
RITA1-201ENST00000548278 SLC26A8Q96RN1 970 aa27.69■■■□□ 2.02
RITA1-201ENST00000548278 PTPRUQ92729 1446 aa27.69■■■□□ 2.02
RITA1-201ENST00000548278 CPSF1Q10570 1443 aaKnown RBP27.68■■■□□ 2.02
RITA1-201ENST00000548278 PPIP5K1Q6PFW1 1433 aa27.68■■■□□ 2.02
RITA1-201ENST00000548278 NUDT16Q96DE0 195 aaKnown RBP27.68■■■□□ 2.02
RITA1-201ENST00000548278 TBX22Q9Y458 520 aa27.68■■■□□ 2.02
RITA1-201ENST00000548278 ADGRB2O60241 1585 aa27.67■■■□□ 2.02
RITA1-201ENST00000548278 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.67■■■□□ 2.02
RITA1-201ENST00000548278 CEP170BQ9Y4F5 1589 aaPredicted RBP27.66■■■□□ 2.02
RITA1-201ENST00000548278 NGEFQ8N5V2 710 aa27.65■■■□□ 2.02
RITA1-201ENST00000548278 GOLGA2Q08379 1002 aa27.64■■■□□ 2.02
RITA1-201ENST00000548278 DIP2AQ14689 1571 aa27.64■■■□□ 2.02
RITA1-201ENST00000548278 RRP1P56182 461 aaKnown RBP27.64■■■□□ 2.01
RITA1-201ENST00000548278 CCDC61Q9Y6R9 512 aa27.64■■■□□ 2.01
RITA1-201ENST00000548278 CDC42BPGQ6DT37 1551 aa27.64■■■□□ 2.01
RITA1-201ENST00000548278 ADAMTSL3P82987 1691 aa27.63■■■□□ 2.01
RITA1-201ENST00000548278 DUSP27Q5VZP5 1158 aa27.62■■■□□ 2.01
RITA1-201ENST00000548278 EDC4Q6P2E9 1401 aaKnown RBP27.62■■■□□ 2.01
RITA1-201ENST00000548278 PRR36Q9H6K5 1346 aa27.61■■■□□ 2.01
RITA1-201ENST00000548278 COL3A1P02461 1466 aaPredicted RBP27.6■■■□□ 2.01
RITA1-201ENST00000548278 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.6■■■□□ 2.01
RITA1-201ENST00000548278 RUNDC1Q96C34 613 aa27.6■■■□□ 2.01
RITA1-201ENST00000548278 NCKAP5LQ9HCH0 1330 aa27.6■■■□□ 2.01
RITA1-201ENST00000548278 SLFN5Q08AF3 891 aa27.6■■■□□ 2.01
RITA1-201ENST00000548278 AMOTL2Q9Y2J4 779 aa27.6■■■□□ 2.01
RITA1-201ENST00000548278 MON2Q7Z3U7 1717 aa27.59■■■□□ 2.01
RITA1-201ENST00000548278 AKAP12Q02952 1782 aa27.59■■■□□ 2.01
RITA1-201ENST00000548278 TRMT2AQ8IZ69 625 aaKnown RBP27.58■■■□□ 2.01
RITA1-201ENST00000548278 PTCH1Q13635 1447 aa27.58■■■□□ 2.01
RITA1-201ENST00000548278 IQSEC2Q5JU85 1478 aa27.58■■■□□ 2.01
RITA1-201ENST00000548278 ITSN1Q15811 1721 aa27.55■■■□□ 2
RITA1-201ENST00000548278 B4GALNT3Q6L9W6 998 aa27.55■■■□□ 2
RITA1-201ENST00000548278 ZNF142P52746 1687 aaPredicted RBP27.54■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms