RNA–Protein interactions for RNA: ENST00000548120.1

RNF41-204, Transcript of ring finger protein 41, humanhuman

TSL 2

Gene RNF41, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-204ENST00000548120 GJD4Q96KN9 370 aaPredicted RBP10.41□□□□□ -0.74
RNF41-204ENST00000548120 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.39□□□□□ -0.75
RNF41-204ENST00000548120 ZBTB12Q9Y330 459 aaPredicted RBP10.39□□□□□ -0.75
RNF41-204ENST00000548120 GCC2Q8IWJ2 1684 aa10.38□□□□□ -0.75
RNF41-204ENST00000548120 AKT1S1Q96B36 256 aa10.38□□□□□ -0.75
RNF41-204ENST00000548120 MYOM3Q5VTT5 1437 aa10.38□□□□□ -0.75
RNF41-204ENST00000548120 UNC13BO14795 1591 aa10.38□□□□□ -0.75
RNF41-204ENST00000548120 RALGAPBQ86X10 1494 aa10.37□□□□□ -0.75
RNF41-204ENST00000548120 R3HDM1Q15032 1099 aaKnown RBP10.37□□□□□ -0.75
RNF41-204ENST00000548120 ADGRL3Q9HAR2 1447 aa10.37□□□□□ -0.75
RNF41-204ENST00000548120 TMEM131LA2VDJ0 1609 aa10.36□□□□□ -0.75
RNF41-204ENST00000548120 MYOM2P54296 1465 aa10.36□□□□□ -0.75
RNF41-204ENST00000548120 C1orf167Q5SNV9 1468 aa10.36□□□□□ -0.75
RNF41-204ENST00000548120 SOS2Q07890 1332 aaPredicted RBP10.36□□□□□ -0.75
RNF41-204ENST00000548120 SENP3-EIF4A1A0A087X0R7 540 aa10.36□□□□□ -0.75
RNF41-204ENST00000548120 BAG6P46379 1132 aa10.36□□□□□ -0.75
RNF41-204ENST00000548120 GLI3P10071 1580 aa10.35□□□□□ -0.75
RNF41-204ENST00000548120 XRN1Q8IZH2 1706 aaKnown RBP10.35□□□□□ -0.75
RNF41-204ENST00000548120 SEPT12Q8IYM1 358 aa10.34□□□□□ -0.75
RNF41-204ENST00000548120 ORAI2Q96SN7 254 aa10.34□□□□□ -0.75
RNF41-204ENST00000548120 RPRD2Q5VT52 1461 aaKnown RBP10.34□□□□□ -0.75
RNF41-204ENST00000548120 ABCC5O15440 1437 aa10.33□□□□□ -0.76
RNF41-204ENST00000548120 COL22A1Q8NFW1 1626 aaPredicted RBP10.33□□□□□ -0.76
RNF41-204ENST00000548120 MYO5BQ9ULV0 1848 aa10.33□□□□□ -0.76
RNF41-204ENST00000548120 SLC4A1APQ9BWU0 796 aaKnown RBP10.33□□□□□ -0.76
RNF41-204ENST00000548120 FOXD4L1Q9NU39 408 aa10.33□□□□□ -0.76
RNF41-204ENST00000548120 UNC5CLQ8IV45 518 aa10.32□□□□□ -0.76
RNF41-204ENST00000548120 NALCNQ8IZF0 1738 aa10.32□□□□□ -0.76
RNF41-204ENST00000548120 CROCC2H7BZ55 1655 aa10.31□□□□□ -0.76
RNF41-204ENST00000548120 METP08581 1390 aa10.31□□□□□ -0.76
RNF41-204ENST00000548120 SPHKAPQ2M3C7 1700 aa10.31□□□□□ -0.76
RNF41-204ENST00000548120 A0A0G2JS52 829 aa10.31□□□□□ -0.76
RNF41-204ENST00000548120 MYT1Q01538 1121 aa10.31□□□□□ -0.76
RNF41-204ENST00000548120 EN1Q05925 392 aaPredicted RBP10.31□□□□□ -0.76
RNF41-204ENST00000548120 KRT27Q7Z3Y8 459 aa10.31□□□□□ -0.76
RNF41-204ENST00000548120 CHIC2Q9UKJ5 165 aa10.31□□□□□ -0.76
RNF41-204ENST00000548120 ATF5Q9Y2D1 282 aaPredicted RBP10.31□□□□□ -0.76
RNF41-204ENST00000548120 LAMC1P11047 1609 aa10.31□□□□□ -0.76
RNF41-204ENST00000548120 VPS8Q8N3P4 1428 aa10.31□□□□□ -0.76
RNF41-204ENST00000548120 CCDC9Q9Y3X0 531 aaKnown RBP10.3□□□□□ -0.76
RNF41-204ENST00000548120 DAPK1P53355 1430 aa10.3□□□□□ -0.76
RNF41-204ENST00000548120 ANKRD30AQ9BXX3 1397 aa10.29□□□□□ -0.76
RNF41-204ENST00000548120 SLIT2O94813 1529 aa10.29□□□□□ -0.76
RNF41-204ENST00000548120 XPCQ01831 940 aaPredicted RBP10.29□□□□□ -0.76
RNF41-204ENST00000548120 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.29□□□□□ -0.76
RNF41-204ENST00000548120 SP7Q8TDD2 431 aaPredicted RBP10.28□□□□□ -0.76
RNF41-204ENST00000548120 NRXN3Q9Y4C0 1643 aa10.28□□□□□ -0.76
RNF41-204ENST00000548120 BRWD3Q6RI45 1802 aa10.27□□□□□ -0.77
RNF41-204ENST00000548120 NPHP3Q7Z494 1330 aa10.27□□□□□ -0.77
RNF41-204ENST00000548120 PXDNQ92626 1479 aa10.26□□□□□ -0.77
RNF41-204ENST00000548120 PPARGC1BQ86YN6 1023 aaKnown RBP10.26□□□□□ -0.77
RNF41-204ENST00000548120 REM2Q8IYK8 340 aaPredicted RBP10.26□□□□□ -0.77
RNF41-204ENST00000548120 ZNF784Q8NCA9 323 aaPredicted RBP10.26□□□□□ -0.77
RNF41-204ENST00000548120 PPP1R1BQ9UD71 204 aaPredicted RBP10.26□□□□□ -0.77
RNF41-204ENST00000548120 VPS72Q15906 364 aa10.25□□□□□ -0.77
RNF41-204ENST00000548120 EZH2Q15910 746 aaKnown RBP10.25□□□□□ -0.77
RNF41-204ENST00000548120 FAM182BQ5T319 152 aa10.25□□□□□ -0.77
RNF41-204ENST00000548120 MARF1Q9Y4F3 1742 aaKnown RBP10.24□□□□□ -0.77
RNF41-204ENST00000548120 PLEKHG5O94827 1062 aa10.24□□□□□ -0.77
RNF41-204ENST00000548120 ESCO1Q5FWF5 840 aa10.24□□□□□ -0.77
RNF41-204ENST00000548120 KANK4Q5T7N3 995 aaPredicted RBP10.24□□□□□ -0.77
RNF41-204ENST00000548120 ADGRL2O95490 1459 aa10.23□□□□□ -0.77
RNF41-204ENST00000548120 USP32Q8NFA0 1604 aa10.23□□□□□ -0.77
RNF41-204ENST00000548120 PTPN23Q9H3S7 1636 aa10.23□□□□□ -0.77
RNF41-204ENST00000548120 FOXO3O43524 673 aa10.23□□□□□ -0.77
RNF41-204ENST00000548120 HAP1P54257 671 aaPredicted RBP10.23□□□□□ -0.77
RNF41-204ENST00000548120 ZNF326Q5BKZ1 582 aaKnown RBP10.23□□□□□ -0.77
RNF41-204ENST00000548120 C1QTNF8P60827 252 aa10.22□□□□□ -0.77
RNF41-204ENST00000548120 FAM98CQ17RN3 349 aaKnown RBP10.22□□□□□ -0.77
RNF41-204ENST00000548120 PIP4P2Q8N4L2 257 aa10.22□□□□□ -0.77
RNF41-204ENST00000548120 ROBO2Q9HCK4 1378 aa10.22□□□□□ -0.77
RNF41-204ENST00000548120 NINLQ9Y2I6 1382 aa10.22□□□□□ -0.77
RNF41-204ENST00000548120 DISP2A7MBM2 1401 aa10.22□□□□□ -0.77
RNF41-204ENST00000548120 ANKRD50Q9ULJ7 1429 aa10.22□□□□□ -0.77
RNF41-204ENST00000548120 ONECUT3O60422 494 aaPredicted RBP10.21□□□□□ -0.77
RNF41-204ENST00000548120 RGPD1P0DJD0 1748 aa10.2□□□□□ -0.78
RNF41-204ENST00000548120 CAMTA1Q9Y6Y1 1673 aa10.19□□□□□ -0.78
RNF41-204ENST00000548120 ADGRB2O60241 1585 aa10.19□□□□□ -0.78
RNF41-204ENST00000548120 LRPPRCP42704 1394 aaKnown RBP10.19□□□□□ -0.78
RNF41-204ENST00000548120 NUTM2FA1L443 756 aa10.19□□□□□ -0.78
RNF41-204ENST00000548120 E9PCH4 1651 aa10.18□□□□□ -0.78
RNF41-204ENST00000548120 IQGAP3Q86VI3 1631 aa10.18□□□□□ -0.78
RNF41-204ENST00000548120 CABLES1Q8TDN4 633 aa10.18□□□□□ -0.78
RNF41-204ENST00000548120 CAMKK2Q96RR4 588 aa10.18□□□□□ -0.78
RNF41-204ENST00000548120 SPON1Q9HCB6 807 aa10.18□□□□□ -0.78
RNF41-204ENST00000548120 PLCH1Q4KWH8 1693 aa10.18□□□□□ -0.78
RNF41-204ENST00000548120 SPATA31A3Q5VYP0 1347 aa10.17□□□□□ -0.78
RNF41-204ENST00000548120 TNS1Q9HBL0 1735 aaKnown RBP10.17□□□□□ -0.78
RNF41-204ENST00000548120 CDC42BPGQ6DT37 1551 aa10.17□□□□□ -0.78
RNF41-204ENST00000548120 TRIM37O94972 964 aa10.16□□□□□ -0.78
RNF41-204ENST00000548120 HFM1A2PYH4 1435 aa10.16□□□□□ -0.78
RNF41-204ENST00000548120 HAX1O00165 279 aa10.15□□□□□ -0.78
RNF41-204ENST00000548120 PITPNM1O00562 1244 aa10.15□□□□□ -0.78
RNF41-204ENST00000548120 KCNQ2O43526 872 aa10.15□□□□□ -0.78
RNF41-204ENST00000548120 APBA3O96018 575 aa10.15□□□□□ -0.78
RNF41-204ENST00000548120 UTRNP46939 3433 aa10.15□□□□□ -0.78
RNF41-204ENST00000548120 CCDC144AA2RUR9 1427 aa10.15□□□□□ -0.79
RNF41-204ENST00000548120 PARD3Q8TEW0 1356 aa10.14□□□□□ -0.79
RNF41-204ENST00000548120 NEXMIFQ5QGS0 1516 aa10.14□□□□□ -0.79
RNF41-204ENST00000548120 NBPF8Q3BBV2 869 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms