RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 TRPM2O94759 1503 aa9.96□□□□□ -0.82
SCAF11-211ENST00000547950 MYO5BQ9ULV0 1848 aa9.96□□□□□ -0.82
SCAF11-211ENST00000547950 POTEAQ6S8J7 498 aa9.95□□□□□ -0.82
SCAF11-211ENST00000547950 ROBO1Q9Y6N7 1651 aa9.94□□□□□ -0.82
SCAF11-211ENST00000547950 CLTCL1P53675 1640 aa9.94□□□□□ -0.82
SCAF11-211ENST00000547950 DIP2AQ14689 1571 aa9.94□□□□□ -0.82
SCAF11-211ENST00000547950 JCADQ9P266 1359 aa9.94□□□□□ -0.82
SCAF11-211ENST00000547950 MEX3CQ5U5Q3 659 aaKnown RBP9.94□□□□□ -0.82
SCAF11-211ENST00000547950 DDX17Q92841 729 aaKnown RBP9.94□□□□□ -0.82
SCAF11-211ENST00000547950 ADGRF5Q8IZF2 1346 aa9.93□□□□□ -0.82
SCAF11-211ENST00000547950 NUTM2BA6NNL0 878 aaPredicted RBP9.93□□□□□ -0.82
SCAF11-211ENST00000547950 NUTM2EB1AL46 878 aaPredicted RBP9.93□□□□□ -0.82
SCAF11-211ENST00000547950 NUTM2AQ8IVF1 878 aaPredicted RBP9.93□□□□□ -0.82
SCAF11-211ENST00000547950 STK26Q9P289 416 aa9.93□□□□□ -0.82
SCAF11-211ENST00000547950 CHD2O14647 1828 aaKnown RBP9.93□□□□□ -0.82
SCAF11-211ENST00000547950 SPHKAPQ2M3C7 1700 aa9.93□□□□□ -0.82
SCAF11-211ENST00000547950 SETBP1Q9Y6X0 1596 aa9.92□□□□□ -0.82
SCAF11-211ENST00000547950 NEXMIFQ5QGS0 1516 aa9.92□□□□□ -0.82
SCAF11-211ENST00000547950 CCDC144AA2RUR9 1427 aa9.91□□□□□ -0.82
SCAF11-211ENST00000547950 SETD5Q9C0A6 1442 aa9.91□□□□□ -0.82
SCAF11-211ENST00000547950 TMEM132EQ6IEE7 984 aa9.91□□□□□ -0.82
SCAF11-211ENST00000547950 FARP1Q9Y4F1 1045 aaPredicted RBP9.91□□□□□ -0.82
SCAF11-211ENST00000547950 ROBO2Q9HCK4 1378 aa9.9□□□□□ -0.82
SCAF11-211ENST00000547950 SPATA31A6Q5VVP1 1343 aa9.9□□□□□ -0.82
SCAF11-211ENST00000547950 ACIN1Q9UKV3 1341 aaKnown RBP9.9□□□□□ -0.82
SCAF11-211ENST00000547950 LRRC59Q96AG4 307 aaKnown RBP9.9□□□□□ -0.82
SCAF11-211ENST00000547950 ORAI2Q96SN7 254 aa9.9□□□□□ -0.82
SCAF11-211ENST00000547950 NRXN3Q9Y4C0 1643 aa9.89□□□□□ -0.83
SCAF11-211ENST00000547950 WAPLQ7Z5K2 1190 aa9.89□□□□□ -0.83
SCAF11-211ENST00000547950 DCCP43146 1447 aa9.89□□□□□ -0.83
SCAF11-211ENST00000547950 MST1RQ04912 1400 aa9.89□□□□□ -0.83
SCAF11-211ENST00000547950 ADGRL3Q9HAR2 1447 aa9.89□□□□□ -0.83
SCAF11-211ENST00000547950 ANKRD30BQ9BXX2 1392 aa9.88□□□□□ -0.83
SCAF11-211ENST00000547950 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.88□□□□□ -0.83
SCAF11-211ENST00000547950 RAB3GAP2Q9H2M9 1393 aa9.88□□□□□ -0.83
SCAF11-211ENST00000547950 NUTM2FA1L443 756 aa9.87□□□□□ -0.83
SCAF11-211ENST00000547950 ESCO1Q5FWF5 840 aa9.87□□□□□ -0.83
SCAF11-211ENST00000547950 ZNF772Q68DY9 489 aaPredicted RBP9.87□□□□□ -0.83
SCAF11-211ENST00000547950 SPATA31E1Q6ZUB1 1445 aa9.87□□□□□ -0.83
SCAF11-211ENST00000547950 PHLPP1O60346 1717 aa9.87□□□□□ -0.83
SCAF11-211ENST00000547950 C1orf167Q5SNV9 1468 aa9.86□□□□□ -0.83
SCAF11-211ENST00000547950 CD44P16070 742 aaKnown RBP9.86□□□□□ -0.83
SCAF11-211ENST00000547950 CFAP70Q5T0N1 1121 aa9.86□□□□□ -0.83
SCAF11-211ENST00000547950 XRN1Q8IZH2 1706 aaKnown RBP9.85□□□□□ -0.83
SCAF11-211ENST00000547950 PTCH1Q13635 1447 aa9.85□□□□□ -0.83
SCAF11-211ENST00000547950 GABBR2O75899 941 aa9.85□□□□□ -0.83
SCAF11-211ENST00000547950 ADAMTS2O95450 1211 aa9.85□□□□□ -0.83
SCAF11-211ENST00000547950 C8orf37Q96NL8 207 aa9.85□□□□□ -0.83
SCAF11-211ENST00000547950 C14orf93Q9H972 538 aaKnown RBP9.85□□□□□ -0.83
SCAF11-211ENST00000547950 KDM2AQ9Y2K7 1162 aa9.85□□□□□ -0.83
SCAF11-211ENST00000547950 ASXL1Q8IXJ9 1541 aa9.85□□□□□ -0.83
SCAF11-211ENST00000547950 KIF1BO60333 1816 aa9.84□□□□□ -0.83
SCAF11-211ENST00000547950 FOXO3O43524 673 aa9.84□□□□□ -0.83
SCAF11-211ENST00000547950 XPCQ01831 940 aaPredicted RBP9.84□□□□□ -0.83
SCAF11-211ENST00000547950 CREBZFQ9NS37 354 aa9.84□□□□□ -0.83
SCAF11-211ENST00000547950 LRP6O75581 1613 aa9.84□□□□□ -0.83
SCAF11-211ENST00000547950 COL16A1Q07092 1604 aaPredicted RBP9.84□□□□□ -0.83
SCAF11-211ENST00000547950 AHDC1Q5TGY3 1603 aaPredicted RBP9.84□□□□□ -0.83
SCAF11-211ENST00000547950 LRPPRCP42704 1394 aaKnown RBP9.84□□□□□ -0.83
SCAF11-211ENST00000547950 AFF2P51816 1311 aa9.83□□□□□ -0.84
SCAF11-211ENST00000547950 RXRBP28702 533 aa9.83□□□□□ -0.84
SCAF11-211ENST00000547950 SAFB2Q14151 953 aaKnown RBP eCLIP9.83□□□□□ -0.84
SCAF11-211ENST00000547950 DCAF11Q8TEB1 546 aa9.83□□□□□ -0.84
SCAF11-211ENST00000547950 NGLY1Q96IV0 654 aa9.83□□□□□ -0.84
SCAF11-211ENST00000547950 ABCC11Q96J66 1382 aa9.83□□□□□ -0.84
SCAF11-211ENST00000547950 PLEKHH1Q9ULM0 1364 aa9.83□□□□□ -0.84
SCAF11-211ENST00000547950 SOS2Q07890 1332 aaPredicted RBP9.82□□□□□ -0.84
SCAF11-211ENST00000547950 QTRT2Q9H974 415 aaKnown RBP9.82□□□□□ -0.84
SCAF11-211ENST00000547950 DHX57Q6P158 1386 aaKnown RBP9.82□□□□□ -0.84
SCAF11-211ENST00000547950 PNPLA6Q8IY17 1366 aa9.82□□□□□ -0.84
SCAF11-211ENST00000547950 HRCP23327 699 aa9.81□□□□□ -0.84
SCAF11-211ENST00000547950 SIRT1Q96EB6 747 aa9.81□□□□□ -0.84
SCAF11-211ENST00000547950 PRAM1Q96QH2 718 aa9.81□□□□□ -0.84
SCAF11-211ENST00000547950 POGKQ9P215 609 aa9.81□□□□□ -0.84
SCAF11-211ENST00000547950 PIK3C2GO75747 1445 aa9.81□□□□□ -0.84
SCAF11-211ENST00000547950 YTHDC2Q9H6S0 1430 aaKnown RBP9.81□□□□□ -0.84
SCAF11-211ENST00000547950 NPHP3Q7Z494 1330 aa9.81□□□□□ -0.84
SCAF11-211ENST00000547950 TRAK1Q9UPV9 953 aa9.8□□□□□ -0.84
SCAF11-211ENST00000547950 PLEKHG5O94827 1062 aa9.79□□□□□ -0.84
SCAF11-211ENST00000547950 PRAG1Q86YV5 1406 aa9.79□□□□□ -0.84
SCAF11-211ENST00000547950 KRT28Q7Z3Y7 464 aa9.78□□□□□ -0.84
SCAF11-211ENST00000547950 USP21Q9UK80 565 aa9.78□□□□□ -0.84
SCAF11-211ENST00000547950 TECPR2O15040 1411 aa9.78□□□□□ -0.84
SCAF11-211ENST00000547950 NALCNQ8IZF0 1738 aa9.78□□□□□ -0.84
SCAF11-211ENST00000547950 PPLO60437 1756 aa9.78□□□□□ -0.84
SCAF11-211ENST00000547950 RBM6P78332 1123 aaKnown RBP9.77□□□□□ -0.85
SCAF11-211ENST00000547950 HIRIP3Q9BW71 556 aaPredicted RBP9.77□□□□□ -0.85
SCAF11-211ENST00000547950 PHF8Q9UPP1 1060 aa9.77□□□□□ -0.85
SCAF11-211ENST00000547950 SETD1AO15047 1707 aaKnown RBP9.76□□□□□ -0.85
SCAF11-211ENST00000547950 PSME1Q06323 249 aa9.76□□□□□ -0.85
SCAF11-211ENST00000547950 LMOD2Q6P5Q4 547 aa9.76□□□□□ -0.85
SCAF11-211ENST00000547950 PMFBP1Q8TBY8 1022 aa9.76□□□□□ -0.85
SCAF11-211ENST00000547950 MINK1Q8N4C8 1332 aaPredicted RBP9.76□□□□□ -0.85
SCAF11-211ENST00000547950 SHPRHQ149N8 1683 aa9.75□□□□□ -0.85
SCAF11-211ENST00000547950 FNBP4Q8N3X1 1017 aaPredicted RBP9.75□□□□□ -0.85
SCAF11-211ENST00000547950 UPF1Q92900 1129 aaKnown RBP eCLIP9.75□□□□□ -0.85
SCAF11-211ENST00000547950 STAC3Q96MF2 364 aa9.75□□□□□ -0.85
SCAF11-211ENST00000547950 MYOM2P54296 1465 aa9.74□□□□□ -0.85
SCAF11-211ENST00000547950 NRXN1Q9ULB1 1477 aa9.74□□□□□ -0.85
SCAF11-211ENST00000547950 HAP1P54257 671 aaPredicted RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms