RNA–Protein interactions for RNA: ENST00000547758.1

CCDC59-202, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-202ENST00000547758 KIF1BO60333 1816 aa20.74■□□□□ 0.91
CCDC59-202ENST00000547758 EP400Q96L91 3159 aa20.73■□□□□ 0.91
CCDC59-202ENST00000547758 CLTCL1P53675 1640 aa20.72■□□□□ 0.91
CCDC59-202ENST00000547758 COL22A1Q8NFW1 1626 aaPredicted RBP20.7■□□□□ 0.9
CCDC59-202ENST00000547758 MARF1Q9Y4F3 1742 aaKnown RBP20.69■□□□□ 0.9
CCDC59-202ENST00000547758 PTCH1Q13635 1447 aa20.69■□□□□ 0.9
CCDC59-202ENST00000547758 USP21Q9UK80 565 aa20.68■□□□□ 0.9
CCDC59-202ENST00000547758 TRPC5Q9UL62 973 aaPredicted RBP20.67■□□□□ 0.9
CCDC59-202ENST00000547758 SOS2Q07890 1332 aaPredicted RBP20.67■□□□□ 0.9
CCDC59-202ENST00000547758 ATRNO75882 1429 aa20.65■□□□□ 0.9
CCDC59-202ENST00000547758 FNBP4Q8N3X1 1017 aaPredicted RBP20.64■□□□□ 0.89
CCDC59-202ENST00000547758 ORAI2Q96SN7 254 aa20.64■□□□□ 0.89
CCDC59-202ENST00000547758 ITGAEP38570 1179 aa20.63■□□□□ 0.89
CCDC59-202ENST00000547758 U3KPZ7 1027 aaPredicted RBP20.63■□□□□ 0.89
CCDC59-202ENST00000547758 ROBO2Q9HCK4 1378 aa20.62■□□□□ 0.89
CCDC59-202ENST00000547758 ZRANB1Q9UGI0 708 aa20.62■□□□□ 0.89
CCDC59-202ENST00000547758 PRAG1Q86YV5 1406 aa20.61■□□□□ 0.89
CCDC59-202ENST00000547758 MYOM2P54296 1465 aa20.61■□□□□ 0.89
CCDC59-202ENST00000547758 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.58■□□□□ 0.89
CCDC59-202ENST00000547758 PPLO60437 1756 aa20.58■□□□□ 0.89
CCDC59-202ENST00000547758 HFM1A2PYH4 1435 aa20.57■□□□□ 0.88
CCDC59-202ENST00000547758 CDC42BPGQ6DT37 1551 aa20.57■□□□□ 0.88
CCDC59-202ENST00000547758 BCL9LQ86UU0 1499 aa20.56■□□□□ 0.88
CCDC59-202ENST00000547758 CCDC125Q86Z20 511 aa20.56■□□□□ 0.88
CCDC59-202ENST00000547758 PXDNQ92626 1479 aa20.56■□□□□ 0.88
CCDC59-202ENST00000547758 NPHP3Q7Z494 1330 aa20.54■□□□□ 0.88
CCDC59-202ENST00000547758 VGFO15240 615 aaPredicted RBP20.54■□□□□ 0.88
CCDC59-202ENST00000547758 BRWD3Q6RI45 1802 aa20.53■□□□□ 0.88
CCDC59-202ENST00000547758 ESCO1Q5FWF5 840 aa20.51■□□□□ 0.87
CCDC59-202ENST00000547758 GJD4Q96KN9 370 aaPredicted RBP20.5■□□□□ 0.87
CCDC59-202ENST00000547758 GLI3P10071 1580 aa20.5■□□□□ 0.87
CCDC59-202ENST00000547758 RPGRIP1LQ68CZ1 1315 aa20.48■□□□□ 0.87
CCDC59-202ENST00000547758 XPCQ01831 940 aaPredicted RBP20.47■□□□□ 0.87
CCDC59-202ENST00000547758 LRPPRCP42704 1394 aaKnown RBP20.46■□□□□ 0.87
CCDC59-202ENST00000547758 BLMP54132 1417 aaPredicted RBP20.46■□□□□ 0.87
CCDC59-202ENST00000547758 RALGAPBQ86X10 1494 aa20.46■□□□□ 0.87
CCDC59-202ENST00000547758 FOXO3O43524 673 aa20.46■□□□□ 0.87
CCDC59-202ENST00000547758 USP32Q8NFA0 1604 aa20.45■□□□□ 0.87
CCDC59-202ENST00000547758 NAIPQ13075 1403 aa20.45■□□□□ 0.86
CCDC59-202ENST00000547758 KIF1AQ12756 1690 aa20.45■□□□□ 0.86
CCDC59-202ENST00000547758 SLIT2O94813 1529 aa20.45■□□□□ 0.86
CCDC59-202ENST00000547758 KNDC1Q76NI1 1749 aa20.44■□□□□ 0.86
CCDC59-202ENST00000547758 FMN2Q9NZ56 1722 aa20.44■□□□□ 0.86
CCDC59-202ENST00000547758 UNC5CLQ8IV45 518 aa20.43■□□□□ 0.86
CCDC59-202ENST00000547758 LRP5O75197 1615 aa20.42■□□□□ 0.86
CCDC59-202ENST00000547758 TECPR2O15040 1411 aa20.41■□□□□ 0.86
CCDC59-202ENST00000547758 PLCH1Q4KWH8 1693 aa20.41■□□□□ 0.86
CCDC59-202ENST00000547758 IFT172Q9UG01 1749 aa20.41■□□□□ 0.86
CCDC59-202ENST00000547758 NWD2Q9ULI1 1742 aa20.41■□□□□ 0.86
CCDC59-202ENST00000547758 RGPD8O14715 1765 aaPredicted RBP20.41■□□□□ 0.86
CCDC59-202ENST00000547758 NUTM2FA1L443 756 aa20.4■□□□□ 0.86
CCDC59-202ENST00000547758 PPARGC1BQ86YN6 1023 aaKnown RBP20.39■□□□□ 0.85
CCDC59-202ENST00000547758 SPINK5Q9NQ38 1064 aaPredicted RBP20.39■□□□□ 0.85
CCDC59-202ENST00000547758 ABCA3Q99758 1704 aa20.39■□□□□ 0.85
CCDC59-202ENST00000547758 CCDC144AA2RUR9 1427 aa20.38■□□□□ 0.85
CCDC59-202ENST00000547758 SPATA31A3Q5VYP0 1347 aa20.38■□□□□ 0.85
CCDC59-202ENST00000547758 DEFB132Q7Z7B7 95 aa20.38■□□□□ 0.85
CCDC59-202ENST00000547758 RRBP1Q9P2E9 1410 aaKnown RBP20.37■□□□□ 0.85
CCDC59-202ENST00000547758 WAPLQ7Z5K2 1190 aa20.37■□□□□ 0.85
CCDC59-202ENST00000547758 SLC4A2P04920 1241 aa20.36■□□□□ 0.85
CCDC59-202ENST00000547758 SF3B2Q13435 895 aaKnown RBP20.36■□□□□ 0.85
CCDC59-202ENST00000547758 STK26Q9P289 416 aa20.36■□□□□ 0.85
CCDC59-202ENST00000547758 ADGRF5Q8IZF2 1346 aa20.35■□□□□ 0.85
CCDC59-202ENST00000547758 CAPN15O75808 1086 aa20.35■□□□□ 0.85
CCDC59-202ENST00000547758 PLEKHH1Q9ULM0 1364 aa20.34■□□□□ 0.85
CCDC59-202ENST00000547758 SEPT12Q8IYM1 358 aa20.34■□□□□ 0.85
CCDC59-202ENST00000547758 SLC4A1APQ9BWU0 796 aaKnown RBP20.34■□□□□ 0.85
CCDC59-202ENST00000547758 TNS3Q68CZ2 1445 aa20.33■□□□□ 0.84
CCDC59-202ENST00000547758 ABCC11Q96J66 1382 aa20.33■□□□□ 0.84
CCDC59-202ENST00000547758 VPS72Q15906 364 aa20.32■□□□□ 0.84
CCDC59-202ENST00000547758 HAP1P54257 671 aaPredicted RBP20.31■□□□□ 0.84
CCDC59-202ENST00000547758 KRT28Q7Z3Y7 464 aa20.31■□□□□ 0.84
CCDC59-202ENST00000547758 TMEM132EQ6IEE7 984 aa20.29■□□□□ 0.84
CCDC59-202ENST00000547758 NRAPQ86VF7 1730 aa20.29■□□□□ 0.84
CCDC59-202ENST00000547758 ANKRD30BQ9BXX2 1392 aa20.29■□□□□ 0.84
CCDC59-202ENST00000547758 PIK3C2GO75747 1445 aa20.28■□□□□ 0.84
CCDC59-202ENST00000547758 SPATA31E1Q6ZUB1 1445 aa20.28■□□□□ 0.84
CCDC59-202ENST00000547758 YTHDC2Q9H6S0 1430 aaKnown RBP20.28■□□□□ 0.84
CCDC59-202ENST00000547758 ONECUT3O60422 494 aaPredicted RBP20.28■□□□□ 0.84
CCDC59-202ENST00000547758 KRT27Q7Z3Y8 459 aa20.28■□□□□ 0.84
CCDC59-202ENST00000547758 CCDC9Q9Y3X0 531 aaKnown RBP20.28■□□□□ 0.84
CCDC59-202ENST00000547758 CABLES1Q8TDN4 633 aa20.27■□□□□ 0.84
CCDC59-202ENST00000547758 RGPD1P0DJD0 1748 aa20.27■□□□□ 0.83
CCDC59-202ENST00000547758 PSME1Q06323 249 aa20.26■□□□□ 0.83
CCDC59-202ENST00000547758 RGL3Q3MIN7 710 aa20.26■□□□□ 0.83
CCDC59-202ENST00000547758 NRXN1Q9ULB1 1477 aa20.25■□□□□ 0.83
CCDC59-202ENST00000547758 SBNO1A3KN83 1393 aa20.25■□□□□ 0.83
CCDC59-202ENST00000547758 PHF8Q9UPP1 1060 aa20.25■□□□□ 0.83
CCDC59-202ENST00000547758 ARHGEF10O15013 1369 aa20.24■□□□□ 0.83
CCDC59-202ENST00000547758 PLEKHG5O94827 1062 aa20.24■□□□□ 0.83
CCDC59-202ENST00000547758 DSG3P32926 999 aa20.24■□□□□ 0.83
CCDC59-202ENST00000547758 PSDA5PKW4 1024 aaPredicted RBP20.23■□□□□ 0.83
CCDC59-202ENST00000547758 BAG6P46379 1132 aa20.23■□□□□ 0.83
CCDC59-202ENST00000547758 TRPM3Q9HCF6 1732 aaPredicted RBP20.22■□□□□ 0.83
CCDC59-202ENST00000547758 A0A0G2JS52 829 aa20.21■□□□□ 0.83
CCDC59-202ENST00000547758 HRCP23327 699 aa20.21■□□□□ 0.83
CCDC59-202ENST00000547758 MYT1Q01538 1121 aa20.21■□□□□ 0.83
CCDC59-202ENST00000547758 LMOD2Q6P5Q4 547 aa20.21■□□□□ 0.83
CCDC59-202ENST00000547758 SIRT1Q96EB6 747 aa20.21■□□□□ 0.83
CCDC59-202ENST00000547758 COL14A1Q05707 1796 aaKnown RBP20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms