RNA–Protein interactions for RNA: ENST00000547019.1

R3HDM2-210, Transcript of R3H domain containing 2, humanhuman

TSL 3

Gene R3HDM2, Length 595 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-210ENST00000547019 PXDNQ92626 1479 aa15.3■□□□□ 0.04
R3HDM2-210ENST00000547019 APLP2Q06481 763 aa15.28■□□□□ 0.04
R3HDM2-210ENST00000547019 GJD4Q96KN9 370 aaPredicted RBP15.27■□□□□ 0.04
R3HDM2-210ENST00000547019 PLCH1Q4KWH8 1693 aa15.26■□□□□ 0.03
R3HDM2-210ENST00000547019 CLTCL1P53675 1640 aa15.26■□□□□ 0.03
R3HDM2-210ENST00000547019 SLIT2O94813 1529 aa15.26■□□□□ 0.03
R3HDM2-210ENST00000547019 ROBO2Q9HCK4 1378 aa15.25■□□□□ 0.03
R3HDM2-210ENST00000547019 USP32Q8NFA0 1604 aa15.25■□□□□ 0.03
R3HDM2-210ENST00000547019 PSDA5PKW4 1024 aaPredicted RBP15.25■□□□□ 0.03
R3HDM2-210ENST00000547019 ABCA3Q99758 1704 aa15.23■□□□□ 0.03
R3HDM2-210ENST00000547019 HRCP23327 699 aa15.23■□□□□ 0.03
R3HDM2-210ENST00000547019 CDC42BPGQ6DT37 1551 aa15.23■□□□□ 0.03
R3HDM2-210ENST00000547019 PRAG1Q86YV5 1406 aa15.22■□□□□ 0.03
R3HDM2-210ENST00000547019 XPCQ01831 940 aaPredicted RBP15.21■□□□□ 0.03
R3HDM2-210ENST00000547019 TNS1Q9HBL0 1735 aaKnown RBP15.2■□□□□ 0.02
R3HDM2-210ENST00000547019 NWD2Q9ULI1 1742 aa15.2■□□□□ 0.02
R3HDM2-210ENST00000547019 KIF1BO60333 1816 aa15.19■□□□□ 0.02
R3HDM2-210ENST00000547019 RGPD1P0DJD0 1748 aa15.18■□□□□ 0.02
R3HDM2-210ENST00000547019 UNC5CLQ8IV45 518 aa15.17■□□□□ 0.02
R3HDM2-210ENST00000547019 SEPT12Q8IYM1 358 aa15.17■□□□□ 0.02
R3HDM2-210ENST00000547019 NRAPQ86VF7 1730 aa15.17■□□□□ 0.02
R3HDM2-210ENST00000547019 FAM50AQ14320 339 aaKnown RBP15.16■□□□□ 0.02
R3HDM2-210ENST00000547019 ZNF326Q5BKZ1 582 aaKnown RBP15.16■□□□□ 0.02
R3HDM2-210ENST00000547019 NPHP3Q7Z494 1330 aa15.16■□□□□ 0.02
R3HDM2-210ENST00000547019 PPLO60437 1756 aa15.15■□□□□ 0.02
R3HDM2-210ENST00000547019 NUP155O75694 1391 aa15.14■□□□□ 0.01
R3HDM2-210ENST00000547019 RGPD8O14715 1765 aaPredicted RBP15.14■□□□□ 0.01
R3HDM2-210ENST00000547019 FOXO3O43524 673 aa15.14■□□□□ 0.01
R3HDM2-210ENST00000547019 HFM1A2PYH4 1435 aa15.13■□□□□ 0.01
R3HDM2-210ENST00000547019 SF3B2Q13435 895 aaKnown RBP15.13■□□□□ 0.01
R3HDM2-210ENST00000547019 FMN2Q9NZ56 1722 aa15.13■□□□□ 0.01
R3HDM2-210ENST00000547019 ESCO1Q5FWF5 840 aa15.12■□□□□ 0.01
R3HDM2-210ENST00000547019 KIF1AQ12756 1690 aa15.12■□□□□ 0.01
R3HDM2-210ENST00000547019 KRT27Q7Z3Y8 459 aa15.1■□□□□ 0.01
R3HDM2-210ENST00000547019 ROCK1Q13464 1354 aa15.1■□□□□ 0.01
R3HDM2-210ENST00000547019 NAIPQ13075 1403 aa15.09■□□□□ 0.01
R3HDM2-210ENST00000547019 ONECUT3O60422 494 aaPredicted RBP15.09■□□□□ 0.01
R3HDM2-210ENST00000547019 EN1Q05925 392 aaPredicted RBP15.09■□□□□ 0.01
R3HDM2-210ENST00000547019 R3HDM1Q15032 1099 aaKnown RBP15.09■□□□□ 0.01
R3HDM2-210ENST00000547019 VPS72Q15906 364 aa15.09■□□□□ 0.01
R3HDM2-210ENST00000547019 SPATA31A3Q5VYP0 1347 aa15.09■□□□□ 0.01
R3HDM2-210ENST00000547019 IFT172Q9UG01 1749 aa15.09■□□□□ 0.01
R3HDM2-210ENST00000547019 BAG6P46379 1132 aa15.08■□□□□ 0
R3HDM2-210ENST00000547019 RREB1Q92766 1687 aa15.08■□□□□ 0
R3HDM2-210ENST00000547019 THSD7AQ9UPZ6 1657 aa15.08■□□□□ 0
R3HDM2-210ENST00000547019 CAMTA1Q9Y6Y1 1673 aa15.07■□□□□ 0
R3HDM2-210ENST00000547019 NUP188Q5SRE5 1749 aa15.07■□□□□ 0
R3HDM2-210ENST00000547019 KNDC1Q76NI1 1749 aa15.07■□□□□ 0
R3HDM2-210ENST00000547019 NUTM2FA1L443 756 aa15.07■□□□□ 0
R3HDM2-210ENST00000547019 YY1P25490 414 aa15.07■□□□□ 0
R3HDM2-210ENST00000547019 DISP2A7MBM2 1401 aa15.07■□□□□ 0
R3HDM2-210ENST00000547019 FAM182BQ5T319 152 aa15.06■□□□□ 0
R3HDM2-210ENST00000547019 CABLES1Q8TDN4 633 aa15.05■□□□□ -0
R3HDM2-210ENST00000547019 TNS3Q68CZ2 1445 aa15.05■□□□□ -0
R3HDM2-210ENST00000547019 CRYBG1Q9Y4K1 1723 aa15.04■□□□□ -0
R3HDM2-210ENST00000547019 CCDC144AA2RUR9 1427 aa15.04■□□□□ -0
R3HDM2-210ENST00000547019 PLEKHH1Q9ULM0 1364 aa15.04■□□□□ -0
R3HDM2-210ENST00000547019 TECPR2O15040 1411 aa15.02■□□□□ -0
R3HDM2-210ENST00000547019 PPARGC1BQ86YN6 1023 aaKnown RBP15.02■□□□□ -0
R3HDM2-210ENST00000547019 TRPM3Q9HCF6 1732 aaPredicted RBP15.02□□□□□ -0.01
R3HDM2-210ENST00000547019 ADGRB2O60241 1585 aa15.02□□□□□ -0.01
R3HDM2-210ENST00000547019 LRPPRCP42704 1394 aaKnown RBP15.01□□□□□ -0.01
R3HDM2-210ENST00000547019 PLEKHG5O94827 1062 aa15.01□□□□□ -0.01
R3HDM2-210ENST00000547019 EZH2Q15910 746 aaKnown RBP15.01□□□□□ -0.01
R3HDM2-210ENST00000547019 FAM98CQ17RN3 349 aaKnown RBP15.01□□□□□ -0.01
R3HDM2-210ENST00000547019 CCDC9Q9Y3X0 531 aaKnown RBP15.01□□□□□ -0.01
R3HDM2-210ENST00000547019 WAPLQ7Z5K2 1190 aa15□□□□□ -0.01
R3HDM2-210ENST00000547019 COL14A1Q05707 1796 aaKnown RBP15□□□□□ -0.01
R3HDM2-210ENST00000547019 ALS2Q96Q42 1657 aa15□□□□□ -0.01
R3HDM2-210ENST00000547019 A0A0G2JS52 829 aa14.98□□□□□ -0.01
R3HDM2-210ENST00000547019 FAM83GA6ND36 823 aa14.98□□□□□ -0.01
R3HDM2-210ENST00000547019 MYT1Q01538 1121 aa14.98□□□□□ -0.01
R3HDM2-210ENST00000547019 KRT28Q7Z3Y7 464 aa14.98□□□□□ -0.01
R3HDM2-210ENST00000547019 VGFO15240 615 aaPredicted RBP14.97□□□□□ -0.01
R3HDM2-210ENST00000547019 NRXN1Q9ULB1 1477 aa14.96□□□□□ -0.01
R3HDM2-210ENST00000547019 CAMKK2Q96RR4 588 aa14.96□□□□□ -0.01
R3HDM2-210ENST00000547019 UTRNP46939 3433 aa14.95□□□□□ -0.02
R3HDM2-210ENST00000547019 HAP1P54257 671 aaPredicted RBP14.94□□□□□ -0.02
R3HDM2-210ENST00000547019 SBNO1A3KN83 1393 aa14.94□□□□□ -0.02
R3HDM2-210ENST00000547019 RRBP1Q9P2E9 1410 aaKnown RBP14.93□□□□□ -0.02
R3HDM2-210ENST00000547019 STK26Q9P289 416 aa14.93□□□□□ -0.02
R3HDM2-210ENST00000547019 ADGRF5Q8IZF2 1346 aa14.92□□□□□ -0.02
R3HDM2-210ENST00000547019 ITGAEP38570 1179 aa14.92□□□□□ -0.02
R3HDM2-210ENST00000547019 BTG4Q9NY30 223 aa14.92□□□□□ -0.02
R3HDM2-210ENST00000547019 CASZ1Q86V15 1759 aa14.92□□□□□ -0.02
R3HDM2-210ENST00000547019 SPATA31A5Q5VU36 1347 aa14.91□□□□□ -0.02
R3HDM2-210ENST00000547019 SPATA31A7Q8IWB4 1347 aa14.91□□□□□ -0.02
R3HDM2-210ENST00000547019 ARHGEF10O15013 1369 aa14.9□□□□□ -0.02
R3HDM2-210ENST00000547019 ABCC11Q96J66 1382 aa14.9□□□□□ -0.02
R3HDM2-210ENST00000547019 TRIM37O94972 964 aa14.9□□□□□ -0.02
R3HDM2-210ENST00000547019 RPGRIP1LQ68CZ1 1315 aa14.9□□□□□ -0.02
R3HDM2-210ENST00000547019 NRKQ7Z2Y5 1582 aa14.9□□□□□ -0.02
R3HDM2-210ENST00000547019 TMEM132EQ6IEE7 984 aa14.89□□□□□ -0.03
R3HDM2-210ENST00000547019 PHF8Q9UPP1 1060 aa14.89□□□□□ -0.03
R3HDM2-210ENST00000547019 MYOM1P52179 1685 aa14.89□□□□□ -0.03
R3HDM2-210ENST00000547019 PHRF1Q9P1Y6 1649 aaKnown RBP14.88□□□□□ -0.03
R3HDM2-210ENST00000547019 NINLQ9Y2I6 1382 aa14.88□□□□□ -0.03
R3HDM2-210ENST00000547019 LMOD2Q6P5Q4 547 aa14.88□□□□□ -0.03
R3HDM2-210ENST00000547019 PIK3C2GO75747 1445 aa14.87□□□□□ -0.03
R3HDM2-210ENST00000547019 YTHDC2Q9H6S0 1430 aaKnown RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms