RNA–Protein interactions for RNA: ENST00000546769.1

PKP2-205, Transcript of plakophilin 2, humanhuman

TSL 2

Gene PKP2, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2-205ENST00000546769 SUPT6HQ7KZ85 1726 aaKnown RBP12.1□□□□□ -0.47
PKP2-205ENST00000546769 HSPA1LP34931 641 aa12.09□□□□□ -0.47
PKP2-205ENST00000546769 ZDHHC16Q969W1 377 aa12.09□□□□□ -0.47
PKP2-205ENST00000546769 KCNK17Q96T54 332 aa12.09□□□□□ -0.47
PKP2-205ENST00000546769 CPS1P31327 1500 aa12.08□□□□□ -0.48
PKP2-205ENST00000546769 ADGRD1Q6QNK2 874 aa12.08□□□□□ -0.48
PKP2-205ENST00000546769 ADAM33Q9BZ11 813 aa12.08□□□□□ -0.48
PKP2-205ENST00000546769 MYT1LQ9UL68 1186 aa12.08□□□□□ -0.48
PKP2-205ENST00000546769 ARIH1Q9Y4X5 557 aaPredicted RBP12.08□□□□□ -0.48
PKP2-205ENST00000546769 PCDHGA10Q9Y5H3 936 aa12.08□□□□□ -0.48
PKP2-205ENST00000546769 TK2O00142 265 aa12.07□□□□□ -0.48
PKP2-205ENST00000546769 TOM1O60784 492 aa12.07□□□□□ -0.48
PKP2-205ENST00000546769 PDIA6Q15084 440 aa12.07□□□□□ -0.48
PKP2-205ENST00000546769 MYO3AQ8NEV4 1616 aa12.07□□□□□ -0.48
PKP2-205ENST00000546769 PHF14O94880 888 aa12.06□□□□□ -0.48
PKP2-205ENST00000546769 RNF166Q96A37 237 aaPredicted RBP12.06□□□□□ -0.48
PKP2-205ENST00000546769 CDK13Q14004 1512 aaKnown RBP12.05□□□□□ -0.48
PKP2-205ENST00000546769 CEP170BQ9Y4F5 1589 aaPredicted RBP12.05□□□□□ -0.48
PKP2-205ENST00000546769 PTPREP23469 700 aa12.04□□□□□ -0.48
PKP2-205ENST00000546769 PLCB2Q00722 1185 aa12.04□□□□□ -0.48
PKP2-205ENST00000546769 AFAP1Q8N556 730 aa12.04□□□□□ -0.48
PKP2-205ENST00000546769 ARHGAP5Q13017 1502 aa12.04□□□□□ -0.48
PKP2-205ENST00000546769 KIF14Q15058 1648 aa12.04□□□□□ -0.48
PKP2-205ENST00000546769 PTPRKQ15262 1439 aa12.03□□□□□ -0.48
PKP2-205ENST00000546769 KIDINS220Q9ULH0 1771 aa12.02□□□□□ -0.48
PKP2-205ENST00000546769 HRO43593 1189 aa12.02□□□□□ -0.49
PKP2-205ENST00000546769 TYW1BQ6NUM6 668 aa12.02□□□□□ -0.49
PKP2-205ENST00000546769 FBXW7Q969H0 707 aa12.02□□□□□ -0.49
PKP2-205ENST00000546769 POLR1AO95602 1720 aaPredicted RBP12.02□□□□□ -0.49
PKP2-205ENST00000546769 ZMYM3Q14202 1370 aa12.02□□□□□ -0.49
PKP2-205ENST00000546769 ITSN2Q9NZM3 1697 aa12.01□□□□□ -0.49
PKP2-205ENST00000546769 CDC42BPBQ9Y5S2 1711 aa12.01□□□□□ -0.49
PKP2-205ENST00000546769 SPDYE16A6NNV3 312 aaPredicted RBP12.01□□□□□ -0.49
PKP2-205ENST00000546769 PIP4K2BP78356 416 aa12□□□□□ -0.49
PKP2-205ENST00000546769 ABCC1P33527 1531 aa12□□□□□ -0.49
PKP2-205ENST00000546769 ALKQ9UM73 1620 aa12□□□□□ -0.49
PKP2-205ENST00000546769 DDX12PQ92771 950 aa11.99□□□□□ -0.49
PKP2-205ENST00000546769 EPAS1Q99814 870 aa11.99□□□□□ -0.49
PKP2-205ENST00000546769 SLC4A5Q9BY07 1137 aa11.99□□□□□ -0.49
PKP2-205ENST00000546769 CDK11AQ9UQ88 783 aaPredicted RBP11.99□□□□□ -0.49
PKP2-205ENST00000546769 VPS9D1Q9Y2B5 631 aa11.99□□□□□ -0.49
PKP2-205ENST00000546769 SHANK2Q9UPX8 1470 aa11.99□□□□□ -0.49
PKP2-205ENST00000546769 ZBED2Q9BTP6 218 aa11.98□□□□□ -0.49
PKP2-205ENST00000546769 CLTCQ00610 1675 aaKnown RBP11.97□□□□□ -0.49
PKP2-205ENST00000546769 PREX2Q70Z35 1606 aa11.97□□□□□ -0.49
PKP2-205ENST00000546769 TROQ12816 1431 aaPredicted RBP11.97□□□□□ -0.49
PKP2-205ENST00000546769 DNMT1P26358 1616 aaKnown RBP11.97□□□□□ -0.49
PKP2-205ENST00000546769 NEURL4Q96JN8 1562 aa11.96□□□□□ -0.49
PKP2-205ENST00000546769 A2ML1A8K2U0 1454 aa11.96□□□□□ -0.49
PKP2-205ENST00000546769 CLIP1P30622 1438 aa11.95□□□□□ -0.5
PKP2-205ENST00000546769 PPP1R3GB7ZBB8 358 aa11.95□□□□□ -0.5
PKP2-205ENST00000546769 PLXNC1O60486 1568 aa11.94□□□□□ -0.5
PKP2-205ENST00000546769 VWDEQ8N2E2 1590 aa11.94□□□□□ -0.5
PKP2-205ENST00000546769 COL9A1P20849 921 aa11.93□□□□□ -0.5
PKP2-205ENST00000546769 KCNV2Q8TDN2 545 aa11.93□□□□□ -0.5
PKP2-205ENST00000546769 RGS17Q9UGC6 210 aaPredicted RBP11.93□□□□□ -0.5
PKP2-205ENST00000546769 FMN1Q68DA7 1419 aa11.93□□□□□ -0.5
PKP2-205ENST00000546769 RNF17Q9BXT8 1623 aaKnown RBP11.93□□□□□ -0.5
PKP2-205ENST00000546769 SAMD9LQ8IVG5 1584 aa11.92□□□□□ -0.5
PKP2-205ENST00000546769 NBR1Q14596 966 aa11.92□□□□□ -0.5
PKP2-205ENST00000546769 C6orf132Q5T0Z8 1188 aa11.92□□□□□ -0.5
PKP2-205ENST00000546769 DEPDC5O75140 1603 aa11.91□□□□□ -0.5
PKP2-205ENST00000546769 BHMG1C9JSJ3 638 aaPredicted RBP11.91□□□□□ -0.5
PKP2-205ENST00000546769 EN1Q05925 392 aaPredicted RBP11.91□□□□□ -0.5
PKP2-205ENST00000546769 SYNMO15061 1565 aa11.91□□□□□ -0.5
PKP2-205ENST00000546769 EEA1Q15075 1411 aa11.9□□□□□ -0.5
PKP2-205ENST00000546769 RBM33Q96EV2 1170 aaKnown RBP11.9□□□□□ -0.5
PKP2-205ENST00000546769 MED14O60244 1454 aa11.89□□□□□ -0.51
PKP2-205ENST00000546769 ARHGEF1Q92888 912 aaKnown RBP11.89□□□□□ -0.51
PKP2-205ENST00000546769 CDC42BPAQ5VT25 1732 aa11.89□□□□□ -0.51
PKP2-205ENST00000546769 INO80Q9ULG1 1556 aaPredicted RBP11.88□□□□□ -0.51
PKP2-205ENST00000546769 ATP7AQ04656 1500 aa11.87□□□□□ -0.51
PKP2-205ENST00000546769 LRRIQ1Q96JM4 1722 aa11.87□□□□□ -0.51
PKP2-205ENST00000546769 GRXCR2A6NFK2 248 aa11.87□□□□□ -0.51
PKP2-205ENST00000546769 RANGAP1P46060 587 aaPredicted RBP11.87□□□□□ -0.51
PKP2-205ENST00000546769 PRIM1P49642 420 aaKnown RBP11.87□□□□□ -0.51
PKP2-205ENST00000546769 PROX2Q3B8N5 592 aa11.87□□□□□ -0.51
PKP2-205ENST00000546769 FAM135AQ9P2D6 1515 aa11.86□□□□□ -0.51
PKP2-205ENST00000546769 TSR1Q2NL82 804 aaKnown RBP11.86□□□□□ -0.51
PKP2-205ENST00000546769 A2MP01023 1474 aa11.86□□□□□ -0.51
PKP2-205ENST00000546769 ADGBQ8N7X0 1667 aa11.86□□□□□ -0.51
PKP2-205ENST00000546769 LRRC7Q96NW7 1537 aa11.86□□□□□ -0.51
PKP2-205ENST00000546769 STRCP1A6NGW2 1772 aa11.85□□□□□ -0.51
PKP2-205ENST00000546769 IQGAP1P46940 1657 aa11.85□□□□□ -0.51
PKP2-205ENST00000546769 MAP3K7O43318 606 aa11.85□□□□□ -0.51
PKP2-205ENST00000546769 STAC3Q96MF2 364 aa11.85□□□□□ -0.51
PKP2-205ENST00000546769 SPAG9O60271 1321 aaKnown RBP11.85□□□□□ -0.51
PKP2-205ENST00000546769 OSBPP22059 807 aa11.84□□□□□ -0.51
PKP2-205ENST00000546769 ANKLE2Q86XL3 938 aa11.84□□□□□ -0.51
PKP2-205ENST00000546769 RABGEF1Q9UJ41 708 aa11.84□□□□□ -0.51
PKP2-205ENST00000546769 NPHP4O75161 1426 aaPredicted RBP11.84□□□□□ -0.51
PKP2-205ENST00000546769 SYCP2Q9BX26 1530 aa11.83□□□□□ -0.52
PKP2-205ENST00000546769 KIAA1107Q9UPP5 1409 aa11.83□□□□□ -0.52
PKP2-205ENST00000546769 TNRQ92752 1358 aa11.82□□□□□ -0.52
PKP2-205ENST00000546769 HAP1P54257 671 aaPredicted RBP11.82□□□□□ -0.52
PKP2-205ENST00000546769 POTEAQ6S8J7 498 aa11.82□□□□□ -0.52
PKP2-205ENST00000546769 NBPF3Q9H094 633 aa11.82□□□□□ -0.52
PKP2-205ENST00000546769 PZPP20742 1482 aa11.82□□□□□ -0.52
PKP2-205ENST00000546769 NLRP1Q9C000 1473 aa11.82□□□□□ -0.52
PKP2-205ENST00000546769 MRPL50Q8N5N7 158 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms