RNA–Protein interactions for RNA: ENST00000546603.5

CPNE8-204, Transcript of copine 8, humanhuman

TSL 3

Gene CPNE8, Length 1,036 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-204ENST00000546603 FAM160A2Q8N612 972 aaPredicted RBP13.22□□□□□ -0.29
CPNE8-204ENST00000546603 RNF223E7ERA6 249 aa13.21□□□□□ -0.29
CPNE8-204ENST00000546603 RSBN1LQ6PCB5 846 aaPredicted RBP13.21□□□□□ -0.29
CPNE8-204ENST00000546603 PCDHGC3Q9UN70 934 aa13.21□□□□□ -0.29
CPNE8-204ENST00000546603 SPTLC1O15269 473 aa13.2□□□□□ -0.3
CPNE8-204ENST00000546603 RIC3Q7Z5B4 369 aa13.2□□□□□ -0.3
CPNE8-204ENST00000546603 FAM117AQ9C073 453 aa13.2□□□□□ -0.3
CPNE8-204ENST00000546603 MYSM1Q5VVJ2 828 aa13.19□□□□□ -0.3
CPNE8-204ENST00000546603 ANKLE1Q8NAG6 615 aa13.19□□□□□ -0.3
CPNE8-204ENST00000546603 C6orf229H3BNL8 230 aa13.18□□□□□ -0.3
CPNE8-204ENST00000546603 BRPF1P55201 1214 aaPredicted RBP13.18□□□□□ -0.3
CPNE8-204ENST00000546603 RETREG3Q86VR2 466 aa13.17□□□□□ -0.3
CPNE8-204ENST00000546603 SYMPKQ92797 1274 aaKnown RBP13.17□□□□□ -0.3
CPNE8-204ENST00000546603 SPDYE5A6NIY4 337 aa13.15□□□□□ -0.3
CPNE8-204ENST00000546603 PPEF1O14829 653 aaPredicted RBP13.15□□□□□ -0.3
CPNE8-204ENST00000546603 MTMR2Q13614 643 aa13.14□□□□□ -0.31
CPNE8-204ENST00000546603 TUSC1Q2TAM9 212 aa13.14□□□□□ -0.31
CPNE8-204ENST00000546603 PRDM9Q9NQV7 894 aa13.14□□□□□ -0.31
CPNE8-204ENST00000546603 MMP16P51512 607 aa13.13□□□□□ -0.31
CPNE8-204ENST00000546603 PRPF38BQ5VTL8 546 aaKnown RBP13.13□□□□□ -0.31
CPNE8-204ENST00000546603 PRKD2Q9BZL6 878 aa13.13□□□□□ -0.31
CPNE8-204ENST00000546603 PCDHB15Q9Y5E8 787 aa13.13□□□□□ -0.31
CPNE8-204ENST00000546603 V9GY48 417 aaPredicted RBP13.13□□□□□ -0.31
CPNE8-204ENST00000546603 PLEKHG3A1L390 1219 aa13.12□□□□□ -0.31
CPNE8-204ENST00000546603 CLK2P49760 499 aaKnown RBP13.12□□□□□ -0.31
CPNE8-204ENST00000546603 ZBTB3Q9H5J0 574 aa13.12□□□□□ -0.31
CPNE8-204ENST00000546603 LIMD1Q9UGP4 676 aa13.12□□□□□ -0.31
CPNE8-204ENST00000546603 DXOO77932 396 aaKnown RBP13.11□□□□□ -0.31
CPNE8-204ENST00000546603 SKIV2LQ15477 1246 aaKnown RBP13.11□□□□□ -0.31
CPNE8-204ENST00000546603 POLR3EQ9NVU0 708 aa13.11□□□□□ -0.31
CPNE8-204ENST00000546603 SH3D19Q5HYK7 790 aa13.1□□□□□ -0.31
CPNE8-204ENST00000546603 JUNDP17535 347 aa13.09□□□□□ -0.31
CPNE8-204ENST00000546603 HRCP23327 699 aa13.09□□□□□ -0.31
CPNE8-204ENST00000546603 CSPP1Q1MSJ5 1256 aa13.09□□□□□ -0.31
CPNE8-204ENST00000546603 FCF1Q9Y324 198 aaKnown RBP13.09□□□□□ -0.31
CPNE8-204ENST00000546603 SLC19A1P41440 591 aa13.08□□□□□ -0.32
CPNE8-204ENST00000546603 PRR7Q8TB68 274 aa13.08□□□□□ -0.32
CPNE8-204ENST00000546603 IL27Q8NEV9 243 aa13.07□□□□□ -0.32
CPNE8-204ENST00000546603 NUTM2BA6NNL0 878 aaPredicted RBP13.06□□□□□ -0.32
CPNE8-204ENST00000546603 NUTM2EB1AL46 878 aaPredicted RBP13.06□□□□□ -0.32
CPNE8-204ENST00000546603 NUTM2DQ5VT03 806 aaPredicted RBP13.06□□□□□ -0.32
CPNE8-204ENST00000546603 NUTM2AQ8IVF1 878 aaPredicted RBP13.06□□□□□ -0.32
CPNE8-204ENST00000546603 LILRB3O75022 631 aa13.05□□□□□ -0.32
CPNE8-204ENST00000546603 DESI1Q6ICB0 168 aa13.05□□□□□ -0.32
CPNE8-204ENST00000546603 CABLES1Q8TDN4 633 aa13.05□□□□□ -0.32
CPNE8-204ENST00000546603 PLA2G2CQ5R387 149 aa13.04□□□□□ -0.32
CPNE8-204ENST00000546603 GOPCQ9HD26 462 aa13.04□□□□□ -0.32
CPNE8-204ENST00000546603 ATP1B4Q9UN42 357 aaPredicted RBP13.04□□□□□ -0.32
CPNE8-204ENST00000546603 QPCTQ16769 361 aa13.03□□□□□ -0.32
CPNE8-204ENST00000546603 LIAT1Q6ZQX7 453 aa13.03□□□□□ -0.32
CPNE8-204ENST00000546603 RPIAP49247 311 aa13.02□□□□□ -0.33
CPNE8-204ENST00000546603 EMID1Q96A84 441 aaPredicted RBP13.02□□□□□ -0.33
CPNE8-204ENST00000546603 ZBTB24O43167 697 aaPredicted RBP13.01□□□□□ -0.33
CPNE8-204ENST00000546603 CCDC24Q8N4L8 307 aa13.01□□□□□ -0.33
CPNE8-204ENST00000546603 CFAP99D6REC4 459 aa13□□□□□ -0.33
CPNE8-204ENST00000546603 SPRYD7Q5W111 196 aa13□□□□□ -0.33
CPNE8-204ENST00000546603 PROCA1Q8NCQ7 364 aaPredicted RBP13□□□□□ -0.33
CPNE8-204ENST00000546603 NUDT12Q9BQG2 462 aa13□□□□□ -0.33
CPNE8-204ENST00000546603 CD2BP2O95400 341 aaKnown RBP12.99□□□□□ -0.33
CPNE8-204ENST00000546603 PTPRNQ16849 979 aa12.99□□□□□ -0.33
CPNE8-204ENST00000546603 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.99□□□□□ -0.33
CPNE8-204ENST00000546603 ZNF598Q86UK7 904 aaKnown RBP12.98□□□□□ -0.33
CPNE8-204ENST00000546603 PCMTD1Q96MG8 357 aaPredicted RBP12.98□□□□□ -0.33
CPNE8-204ENST00000546603 CCNYL3P0C7X3 344 aa12.97□□□□□ -0.33
CPNE8-204ENST00000546603 RTL5Q5HYW3 569 aaPredicted RBP12.97□□□□□ -0.33
CPNE8-204ENST00000546603 LYPD8Q6UX82 237 aa12.96□□□□□ -0.33
CPNE8-204ENST00000546603 HELBQ8NG08 1087 aaPredicted RBP12.95□□□□□ -0.34
CPNE8-204ENST00000546603 TSC1Q92574 1164 aa12.95□□□□□ -0.34
CPNE8-204ENST00000546603 PPP2R2DQ66LE6 453 aa12.94□□□□□ -0.34
CPNE8-204ENST00000546603 IRX2Q9BZI1 471 aaPredicted RBP12.94□□□□□ -0.34
CPNE8-204ENST00000546603 EVA1BQ9NVM1 165 aa12.94□□□□□ -0.34
CPNE8-204ENST00000546603 ZNF697Q5TEC3 545 aa12.93□□□□□ -0.34
CPNE8-204ENST00000546603 KCNH2Q12809 1159 aa12.91□□□□□ -0.34
CPNE8-204ENST00000546603 TRIM32Q13049 653 aa12.91□□□□□ -0.34
CPNE8-204ENST00000546603 PTCRAQ6ISU1 281 aaPredicted RBP12.89□□□□□ -0.35
CPNE8-204ENST00000546603 LAPTM4AQ15012 233 aa12.88□□□□□ -0.35
CPNE8-204ENST00000546603 PER1O15534 1290 aaPredicted RBP12.87□□□□□ -0.35
CPNE8-204ENST00000546603 CTHP32929 405 aa12.87□□□□□ -0.35
CPNE8-204ENST00000546603 PDZRN3Q9UPQ7 1066 aa12.87□□□□□ -0.35
CPNE8-204ENST00000546603 GFRA3O60609 400 aa12.86□□□□□ -0.35
CPNE8-204ENST00000546603 FBXO31Q5XUX0 539 aaPredicted RBP12.86□□□□□ -0.35
CPNE8-204ENST00000546603 CTDSPL2Q05D32 466 aa12.85□□□□□ -0.35
CPNE8-204ENST00000546603 UNC93B1Q9H1C4 597 aa12.85□□□□□ -0.35
CPNE8-204ENST00000546603 F12P00748 615 aaPredicted RBP12.84□□□□□ -0.35
CPNE8-204ENST00000546603 RFC5P40937 340 aa12.84□□□□□ -0.35
CPNE8-204ENST00000546603 PRR20EP86478 221 aa12.84□□□□□ -0.35
CPNE8-204ENST00000546603 PRR20CP86479 221 aa12.84□□□□□ -0.35
CPNE8-204ENST00000546603 PRR20DP86480 221 aa12.84□□□□□ -0.35
CPNE8-204ENST00000546603 PRR20BP86481 221 aa12.84□□□□□ -0.35
CPNE8-204ENST00000546603 PRR20AP86496 221 aa12.84□□□□□ -0.35
CPNE8-204ENST00000546603 GDF9O60383 454 aa12.83□□□□□ -0.36
CPNE8-204ENST00000546603 WNT7BP56706 349 aa12.83□□□□□ -0.36
CPNE8-204ENST00000546603 TRIM67Q6ZTA4 783 aa12.83□□□□□ -0.36
CPNE8-204ENST00000546603 NRG2O14511 850 aaPredicted RBP12.82□□□□□ -0.36
CPNE8-204ENST00000546603 AP1G2O75843 785 aa12.82□□□□□ -0.36
CPNE8-204ENST00000546603 FOXC1Q12948 553 aa12.82□□□□□ -0.36
CPNE8-204ENST00000546603 MAP10Q9P2G4 905 aa12.82□□□□□ -0.36
CPNE8-204ENST00000546603 TMEM259Q4ZIN3 620 aa12.81□□□□□ -0.36
CPNE8-204ENST00000546603 PKD2L1Q9P0L9 805 aa12.81□□□□□ -0.36
CPNE8-204ENST00000546603 WNT7AO00755 349 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms