RNA–Protein interactions for RNA: ENST00000546455.5

PCED1B-202, Transcript of PC-esterase domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCED1B, Length 2,328 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCED1B-202ENST00000546455 ABCC3O15438 1527 aa20.27■□□□□ 0.84
PCED1B-202ENST00000546455 SAFB2Q14151 953 aaKnown RBP eCLIP20.27■□□□□ 0.84
PCED1B-202ENST00000546455 PPLO60437 1756 aa20.27■□□□□ 0.84
PCED1B-202ENST00000546455 WWC1Q8IX03 1113 aa20.27■□□□□ 0.84
PCED1B-202ENST00000546455 QRICH2Q9H0J4 1663 aa20.27■□□□□ 0.83
PCED1B-202ENST00000546455 LAS1LQ9Y4W2 734 aaKnown RBP20.26■□□□□ 0.83
PCED1B-202ENST00000546455 RGS3P49796 1198 aa20.24■□□□□ 0.83
PCED1B-202ENST00000546455 MTHFSP49914 203 aa20.24■□□□□ 0.83
PCED1B-202ENST00000546455 CYB5RLQ6IPT4 315 aa20.23■□□□□ 0.83
PCED1B-202ENST00000546455 RPGRIP1LQ68CZ1 1315 aa20.23■□□□□ 0.83
PCED1B-202ENST00000546455 CABP2Q9NPB3 220 aa20.22■□□□□ 0.83
PCED1B-202ENST00000546455 ZC3H13Q5T200 1668 aaKnown RBP20.22■□□□□ 0.83
PCED1B-202ENST00000546455 CFAP74Q9C0B2 1584 aa20.22■□□□□ 0.83
PCED1B-202ENST00000546455 SIGLEC1Q9BZZ2 1709 aa20.22■□□□□ 0.83
PCED1B-202ENST00000546455 TCP11L2Q8N4U5 519 aa20.21■□□□□ 0.83
PCED1B-202ENST00000546455 STK26Q9P289 416 aa20.21■□□□□ 0.83
PCED1B-202ENST00000546455 PANK1Q8TE04 598 aa20.2■□□□□ 0.82
PCED1B-202ENST00000546455 RUNDC1Q96C34 613 aa20.2■□□□□ 0.82
PCED1B-202ENST00000546455 SHPRHQ149N8 1683 aa20.2■□□□□ 0.82
PCED1B-202ENST00000546455 RTL5Q5HYW3 569 aaPredicted RBP20.2■□□□□ 0.82
PCED1B-202ENST00000546455 CAMSAP1Q5T5Y3 1602 aa20.2■□□□□ 0.82
PCED1B-202ENST00000546455 CGNL1Q0VF96 1302 aa20.19■□□□□ 0.82
PCED1B-202ENST00000546455 VGFO15240 615 aaPredicted RBP20.19■□□□□ 0.82
PCED1B-202ENST00000546455 CANXP27824 592 aaKnown RBP20.19■□□□□ 0.82
PCED1B-202ENST00000546455 IDI1Q13907 227 aa20.19■□□□□ 0.82
PCED1B-202ENST00000546455 GLI2P10070 1586 aa20.19■□□□□ 0.82
PCED1B-202ENST00000546455 IGHDP01880 384 aa20.19■□□□□ 0.82
PCED1B-202ENST00000546455 FRAT1Q92837 279 aaPredicted RBP20.19■□□□□ 0.82
PCED1B-202ENST00000546455 EVC2Q86UK5 1308 aa20.18■□□□□ 0.82
PCED1B-202ENST00000546455 COG6Q9Y2V7 657 aa20.18■□□□□ 0.82
PCED1B-202ENST00000546455 C8orf34Q49A92 452 aa20.18■□□□□ 0.82
PCED1B-202ENST00000546455 TULP4Q9NRJ4 1543 aa20.17■□□□□ 0.82
PCED1B-202ENST00000546455 NGEFQ8N5V2 710 aa20.17■□□□□ 0.82
PCED1B-202ENST00000546455 SLC4A3P48751 1232 aa20.16■□□□□ 0.82
PCED1B-202ENST00000546455 NEXMIFQ5QGS0 1516 aa20.16■□□□□ 0.82
PCED1B-202ENST00000546455 FAM161AQ3B820 660 aa20.16■□□□□ 0.82
PCED1B-202ENST00000546455 BCL2L13Q9BXK5 485 aa20.15■□□□□ 0.82
PCED1B-202ENST00000546455 CFAP53Q96M91 514 aa20.14■□□□□ 0.82
PCED1B-202ENST00000546455 TNNQ9UQP3 1299 aa20.14■□□□□ 0.82
PCED1B-202ENST00000546455 DIP2CQ9Y2E4 1556 aa20.14■□□□□ 0.81
PCED1B-202ENST00000546455 IQSEC2Q5JU85 1478 aa20.14■□□□□ 0.81
PCED1B-202ENST00000546455 YEATS2Q9ULM3 1422 aa20.14■□□□□ 0.81
PCED1B-202ENST00000546455 ANKRD36BQ8N2N9 1353 aa20.13■□□□□ 0.81
PCED1B-202ENST00000546455 U2AF1L5P0DN76 240 aaPredicted RBP20.13■□□□□ 0.81
PCED1B-202ENST00000546455 U2AF1Q01081 240 aaKnown RBP eCLIP20.13■□□□□ 0.81
PCED1B-202ENST00000546455 PIK3C2BO00750 1634 aa20.12■□□□□ 0.81
PCED1B-202ENST00000546455 ARHGEF28Q8N1W1 1705 aaKnown RBP20.12■□□□□ 0.81
PCED1B-202ENST00000546455 NEFMP07197 916 aa20.12■□□□□ 0.81
PCED1B-202ENST00000546455 RARSP54136 660 aaKnown RBP20.12■□□□□ 0.81
PCED1B-202ENST00000546455 SRPK2P78362 688 aaKnown RBP20.12■□□□□ 0.81
PCED1B-202ENST00000546455 PDE3AQ14432 1141 aa20.12■□□□□ 0.81
PCED1B-202ENST00000546455 NEO1Q92859 1461 aa20.12■□□□□ 0.81
PCED1B-202ENST00000546455 DDRGK1Q96HY6 314 aa20.11■□□□□ 0.81
PCED1B-202ENST00000546455 CLUAP1Q96AJ1 413 aa20.1■□□□□ 0.81
PCED1B-202ENST00000546455 PHF23Q9BUL5 403 aaPredicted RBP20.1■□□□□ 0.81
PCED1B-202ENST00000546455 GGNBP2Q9H3C7 697 aa20.1■□□□□ 0.81
PCED1B-202ENST00000546455 MINK1Q8N4C8 1332 aaPredicted RBP20.1■□□□□ 0.81
PCED1B-202ENST00000546455 RLBP1P12271 317 aa20.09■□□□□ 0.81
PCED1B-202ENST00000546455 A0A1W2PP64 1363 aa20.09■□□□□ 0.81
PCED1B-202ENST00000546455 USP32Q8NFA0 1604 aa20.09■□□□□ 0.81
PCED1B-202ENST00000546455 FBXO31Q5XUX0 539 aaPredicted RBP20.08■□□□□ 0.8
PCED1B-202ENST00000546455 WDR63Q8IWG1 891 aa20.08■□□□□ 0.8
PCED1B-202ENST00000546455 PRAM1Q96QH2 718 aa20.07■□□□□ 0.8
PCED1B-202ENST00000546455 U2SURPO15042 1029 aaKnown RBP20.06■□□□□ 0.8
PCED1B-202ENST00000546455 PUS7Q96PZ0 661 aaKnown RBP20.06■□□□□ 0.8
PCED1B-202ENST00000546455 ARHGAP31Q2M1Z3 1444 aa20.05■□□□□ 0.8
PCED1B-202ENST00000546455 SLC52A1Q9NWF4 448 aa20.05■□□□□ 0.8
PCED1B-202ENST00000546455 TSR2Q969E8 191 aaKnown RBP20.04■□□□□ 0.8
PCED1B-202ENST00000546455 NSD2O96028 1365 aa20.04■□□□□ 0.8
PCED1B-202ENST00000546455 NINLQ9Y2I6 1382 aa20.04■□□□□ 0.8
PCED1B-202ENST00000546455 CCDC27Q2M243 656 aa20.03■□□□□ 0.8
PCED1B-202ENST00000546455 POGKQ9P215 609 aa20.03■□□□□ 0.8
PCED1B-202ENST00000546455 PCDHB15Q9Y5E8 787 aa20.03■□□□□ 0.8
PCED1B-202ENST00000546455 RICTORQ6R327 1708 aa20.02■□□□□ 0.8
PCED1B-202ENST00000546455 ABCC11Q96J66 1382 aa20.02■□□□□ 0.8
PCED1B-202ENST00000546455 PPM1GO15355 546 aaPredicted RBP20.02■□□□□ 0.79
PCED1B-202ENST00000546455 DAXXQ9UER7 740 aaPredicted RBP20.02■□□□□ 0.79
PCED1B-202ENST00000546455 MYO5BQ9ULV0 1848 aa20.01■□□□□ 0.79
PCED1B-202ENST00000546455 FYB1O15117 783 aa20.01■□□□□ 0.79
PCED1B-202ENST00000546455 MYH16Q9H6N6 1097 aa20.01■□□□□ 0.79
PCED1B-202ENST00000546455 PTPRMP28827 1452 aa20■□□□□ 0.79
PCED1B-202ENST00000546455 ZFYVE9O95405 1425 aa19.99■□□□□ 0.79
PCED1B-202ENST00000546455 SEC24BO95487 1268 aa19.99■□□□□ 0.79
PCED1B-202ENST00000546455 PLEKHF1Q96S99 279 aa19.98■□□□□ 0.79
PCED1B-202ENST00000546455 TMEM131LA2VDJ0 1609 aa19.98■□□□□ 0.79
PCED1B-202ENST00000546455 YTHDC2Q9H6S0 1430 aaKnown RBP19.98■□□□□ 0.79
PCED1B-202ENST00000546455 STAG3Q9UJ98 1225 aa19.97■□□□□ 0.79
PCED1B-202ENST00000546455 TERF2IPQ9NYB0 399 aa19.97■□□□□ 0.79
PCED1B-202ENST00000546455 PREX1Q8TCU6 1659 aa19.97■□□□□ 0.79
PCED1B-202ENST00000546455 CD163L1Q9NR16 1453 aa19.96■□□□□ 0.79
PCED1B-202ENST00000546455 TMPOP42166 694 aaKnown RBP19.96■□□□□ 0.79
PCED1B-202ENST00000546455 CDK19Q9BWU1 502 aa19.96■□□□□ 0.79
PCED1B-202ENST00000546455 FBLN1P23142 703 aa19.96■□□□□ 0.79
PCED1B-202ENST00000546455 EXOSC9Q06265 439 aaKnown RBP19.96■□□□□ 0.79
PCED1B-202ENST00000546455 CABP1Q9NZU7 370 aa19.96■□□□□ 0.79
PCED1B-202ENST00000546455 TRIM35Q9UPQ4 493 aa19.96■□□□□ 0.79
PCED1B-202ENST00000546455 ATAD2Q6PL18 1390 aa19.95■□□□□ 0.78
PCED1B-202ENST00000546455 USP35Q9P2H5 1018 aa19.95■□□□□ 0.78
PCED1B-202ENST00000546455 USP19O94966 1318 aa19.95■□□□□ 0.78
PCED1B-202ENST00000546455 ADGRB2O60241 1585 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms