RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 LAMC1P11047 1609 aa16.01■□□□□ 0.15
CCDC38-202ENST00000546386 RRP7AQ9Y3A4 280 aaKnown RBP16.01■□□□□ 0.15
CCDC38-202ENST00000546386 ARHGEF40Q8TER5 1519 aa16■□□□□ 0.15
CCDC38-202ENST00000546386 SOX12O15370 315 aa16■□□□□ 0.15
CCDC38-202ENST00000546386 TNRQ92752 1358 aa16■□□□□ 0.15
CCDC38-202ENST00000546386 YTHDC2Q9H6S0 1430 aaKnown RBP15.99■□□□□ 0.15
CCDC38-202ENST00000546386 B4GALNT3Q6L9W6 998 aa15.99■□□□□ 0.15
CCDC38-202ENST00000546386 ZRANB1Q9UGI0 708 aa15.99■□□□□ 0.15
CCDC38-202ENST00000546386 ASXL1Q8IXJ9 1541 aa15.99■□□□□ 0.15
CCDC38-202ENST00000546386 PLIN1O60240 522 aa15.98■□□□□ 0.15
CCDC38-202ENST00000546386 NCBP3Q53F19 620 aaKnown RBP15.98■□□□□ 0.15
CCDC38-202ENST00000546386 MTHFSP49914 203 aa15.97■□□□□ 0.15
CCDC38-202ENST00000546386 QRICH2Q9H0J4 1663 aa15.97■□□□□ 0.15
CCDC38-202ENST00000546386 APAF1O14727 1248 aa15.96■□□□□ 0.15
CCDC38-202ENST00000546386 MYOM1P52179 1685 aa15.96■□□□□ 0.15
CCDC38-202ENST00000546386 KDM5AP29375 1690 aaKnown RBP15.95■□□□□ 0.14
CCDC38-202ENST00000546386 LRPPRCP42704 1394 aaKnown RBP15.95■□□□□ 0.14
CCDC38-202ENST00000546386 ZC3H13Q5T200 1668 aaKnown RBP15.95■□□□□ 0.14
CCDC38-202ENST00000546386 AGLP35573 1532 aa15.95■□□□□ 0.14
CCDC38-202ENST00000546386 ALKQ9UM73 1620 aa15.94■□□□□ 0.14
CCDC38-202ENST00000546386 PTPRMP28827 1452 aa15.94■□□□□ 0.14
CCDC38-202ENST00000546386 TULP4Q9NRJ4 1543 aa15.94■□□□□ 0.14
CCDC38-202ENST00000546386 A0A1W2PP64 1363 aa15.94■□□□□ 0.14
CCDC38-202ENST00000546386 NUDCQ9Y266 331 aa15.93■□□□□ 0.14
CCDC38-202ENST00000546386 DMRT2Q9Y5R5 561 aa15.93■□□□□ 0.14
CCDC38-202ENST00000546386 ZBTB22O15209 634 aa15.92■□□□□ 0.14
CCDC38-202ENST00000546386 KIAA1210Q9ULL0 1709 aa15.92■□□□□ 0.14
CCDC38-202ENST00000546386 DNAJC5Q9H3Z4 198 aa15.92■□□□□ 0.14
CCDC38-202ENST00000546386 SPINK5Q9NQ38 1064 aaPredicted RBP15.92■□□□□ 0.14
CCDC38-202ENST00000546386 U2SURPO15042 1029 aaKnown RBP15.91■□□□□ 0.14
CCDC38-202ENST00000546386 PMFBP1Q8TBY8 1022 aa15.91■□□□□ 0.14
CCDC38-202ENST00000546386 CGNL1Q0VF96 1302 aa15.9■□□□□ 0.14
CCDC38-202ENST00000546386 FYB1O15117 783 aa15.9■□□□□ 0.14
CCDC38-202ENST00000546386 TMEM2Q9UHN6 1383 aa15.9■□□□□ 0.14
CCDC38-202ENST00000546386 NEURL4Q96JN8 1562 aa15.89■□□□□ 0.13
CCDC38-202ENST00000546386 ARHGEF28Q8N1W1 1705 aaKnown RBP15.89■□□□□ 0.13
CCDC38-202ENST00000546386 SPATA31D1Q6ZQQ2 1576 aa15.89■□□□□ 0.13
CCDC38-202ENST00000546386 SETBP1Q9Y6X0 1596 aa15.89■□□□□ 0.13
CCDC38-202ENST00000546386 NME9Q86XW9 330 aa15.88■□□□□ 0.13
CCDC38-202ENST00000546386 EID1Q9Y6B2 187 aa15.88■□□□□ 0.13
CCDC38-202ENST00000546386 ROBO2Q9HCK4 1378 aa15.88■□□□□ 0.13
CCDC38-202ENST00000546386 U2AF1L5P0DN76 240 aaPredicted RBP15.87■□□□□ 0.13
CCDC38-202ENST00000546386 U2AF1Q01081 240 aaKnown RBP eCLIP15.87■□□□□ 0.13
CCDC38-202ENST00000546386 AMOTL2Q9Y2J4 779 aa15.87■□□□□ 0.13
CCDC38-202ENST00000546386 ZFYVE9O95405 1425 aa15.86■□□□□ 0.13
CCDC38-202ENST00000546386 NUTM2GQ5VZR2 741 aa15.86■□□□□ 0.13
CCDC38-202ENST00000546386 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.86■□□□□ 0.13
CCDC38-202ENST00000546386 NUDT16Q96DE0 195 aaKnown RBP15.86■□□□□ 0.13
CCDC38-202ENST00000546386 SBNO2Q9Y2G9 1366 aa15.86■□□□□ 0.13
CCDC38-202ENST00000546386 WASLO00401 505 aaPredicted RBP15.86■□□□□ 0.13
CCDC38-202ENST00000546386 RRS1Q15050 365 aaKnown RBP15.85■□□□□ 0.13
CCDC38-202ENST00000546386 TERF2IPQ9NYB0 399 aa15.85■□□□□ 0.13
CCDC38-202ENST00000546386 REREQ9P2R6 1566 aa15.85■□□□□ 0.13
CCDC38-202ENST00000546386 SLC24A1O60721 1099 aa15.84■□□□□ 0.13
CCDC38-202ENST00000546386 HDGFL2Q7Z4V5 671 aaPredicted RBP15.84■□□□□ 0.13
CCDC38-202ENST00000546386 RCAN3Q9UKA8 241 aa15.84■□□□□ 0.13
CCDC38-202ENST00000546386 ANKRD36BQ8N2N9 1353 aa15.84■□□□□ 0.13
CCDC38-202ENST00000546386 HDGFP51858 240 aaKnown RBP15.83■□□□□ 0.13
CCDC38-202ENST00000546386 PRR36Q9H6K5 1346 aa15.83■□□□□ 0.13
CCDC38-202ENST00000546386 KCNA6P17658 529 aa15.82■□□□□ 0.12
CCDC38-202ENST00000546386 EMILIN1Q9Y6C2 1016 aa15.82■□□□□ 0.12
CCDC38-202ENST00000546386 C20orf194Q5TEA3 1177 aa15.82■□□□□ 0.12
CCDC38-202ENST00000546386 SMG6Q86US8 1419 aaKnown RBP15.82■□□□□ 0.12
CCDC38-202ENST00000546386 HMOX1P09601 288 aa15.82■□□□□ 0.12
CCDC38-202ENST00000546386 SKAP1Q86WV1 359 aa15.82■□□□□ 0.12
CCDC38-202ENST00000546386 THEMISQ8N1K5 641 aaPredicted RBP15.81■□□□□ 0.12
CCDC38-202ENST00000546386 EXOC6Q8TAG9 804 aa15.81■□□□□ 0.12
CCDC38-202ENST00000546386 MYO3AQ8NEV4 1616 aa15.8■□□□□ 0.12
CCDC38-202ENST00000546386 TCP11L2Q8N4U5 519 aa15.8■□□□□ 0.12
CCDC38-202ENST00000546386 BCL2L13Q9BXK5 485 aa15.79■□□□□ 0.12
CCDC38-202ENST00000546386 ADAMTS13Q76LX8 1427 aa15.79■□□□□ 0.12
CCDC38-202ENST00000546386 PPIP5K1Q6PFW1 1433 aa15.79■□□□□ 0.12
CCDC38-202ENST00000546386 PTPRUQ92729 1446 aa15.79■□□□□ 0.12
CCDC38-202ENST00000546386 CD163L1Q9NR16 1453 aa15.78■□□□□ 0.12
CCDC38-202ENST00000546386 ABCC11Q96J66 1382 aa15.78■□□□□ 0.12
CCDC38-202ENST00000546386 C14orf37Q86TY3 774 aa15.78■□□□□ 0.12
CCDC38-202ENST00000546386 TSHZ2Q9NRE2 1034 aa15.78■□□□□ 0.12
CCDC38-202ENST00000546386 NRXN3Q9Y4C0 1643 aa15.78■□□□□ 0.12
CCDC38-202ENST00000546386 CCDC61Q9Y6R9 512 aa15.78■□□□□ 0.12
CCDC38-202ENST00000546386 XPCQ01831 940 aaPredicted RBP15.77■□□□□ 0.12
CCDC38-202ENST00000546386 C3P01024 1663 aa15.77■□□□□ 0.12
CCDC38-202ENST00000546386 ATAD2Q6PL18 1390 aa15.77■□□□□ 0.11
CCDC38-202ENST00000546386 BCAR3O75815 825 aa15.77■□□□□ 0.11
CCDC38-202ENST00000546386 GOLGA2Q08379 1002 aa15.77■□□□□ 0.11
CCDC38-202ENST00000546386 PAK3O75914 559 aaPredicted RBP15.76■□□□□ 0.11
CCDC38-202ENST00000546386 HSPA2P54652 639 aa15.76■□□□□ 0.11
CCDC38-202ENST00000546386 DUSP27Q5VZP5 1158 aa15.76■□□□□ 0.11
CCDC38-202ENST00000546386 UBR1Q8IWV7 1749 aa15.76■□□□□ 0.11
CCDC38-202ENST00000546386 ACEP12821 1306 aa15.75■□□□□ 0.11
CCDC38-202ENST00000546386 CFAP53Q96M91 514 aa15.75■□□□□ 0.11
CCDC38-202ENST00000546386 BLMP54132 1417 aaPredicted RBP15.75■□□□□ 0.11
CCDC38-202ENST00000546386 RRP1P56182 461 aaKnown RBP15.75■□□□□ 0.11
CCDC38-202ENST00000546386 FER1L4A9Z1Z3 1794 aa15.74■□□□□ 0.11
CCDC38-202ENST00000546386 ZBTB7CA1YPR0 619 aa15.74■□□□□ 0.11
CCDC38-202ENST00000546386 CCDC136Q96JN2 1154 aa15.74■□□□□ 0.11
CCDC38-202ENST00000546386 POLKQ9UBT6 870 aa15.74■□□□□ 0.11
CCDC38-202ENST00000546386 WWC1Q8IX03 1113 aa15.74■□□□□ 0.11
CCDC38-202ENST00000546386 THUMPD2Q9BTF0 503 aaKnown RBP15.74■□□□□ 0.11
CCDC38-202ENST00000546386 PPP4R2Q9NY27 417 aa15.74■□□□□ 0.11
CCDC38-202ENST00000546386 NPC1L1Q9UHC9 1359 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms