RNA–Protein interactions for RNA: ENST00000546039.5

PAAF1-216, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-216ENST00000546039 PLEKHH1Q9ULM0 1364 aa15.2■□□□□ 0.02
PAAF1-216ENST00000546039 SBNO2Q9Y2G9 1366 aa15.2■□□□□ 0.02
PAAF1-216ENST00000546039 IQSEC2Q5JU85 1478 aa15.2■□□□□ 0.02
PAAF1-216ENST00000546039 ITSN1Q15811 1721 aa15.18■□□□□ 0.02
PAAF1-216ENST00000546039 EIF4G2P78344 907 aaKnown RBP eCLIP15.18■□□□□ 0.02
PAAF1-216ENST00000546039 DCCP43146 1447 aa15.17■□□□□ 0.02
PAAF1-216ENST00000546039 RGPD8O14715 1765 aaPredicted RBP15.17■□□□□ 0.02
PAAF1-216ENST00000546039 WAPLQ7Z5K2 1190 aa15.17■□□□□ 0.02
PAAF1-216ENST00000546039 TULP4Q9NRJ4 1543 aa15.16■□□□□ 0.02
PAAF1-216ENST00000546039 MSH6P52701 1360 aa15.15■□□□□ 0.02
PAAF1-216ENST00000546039 ST20-MTHFSA0A0A6YYL1 179 aa15.14■□□□□ 0.01
PAAF1-216ENST00000546039 SAFB2Q14151 953 aaKnown RBP eCLIP15.14■□□□□ 0.01
PAAF1-216ENST00000546039 TOPAZ1Q8N9V7 1692 aa15.13■□□□□ 0.01
PAAF1-216ENST00000546039 SLC24A1O60721 1099 aa15.13■□□□□ 0.01
PAAF1-216ENST00000546039 HSPA5P11021 654 aaKnown RBP15.13■□□□□ 0.01
PAAF1-216ENST00000546039 C14orf37Q86TY3 774 aa15.13■□□□□ 0.01
PAAF1-216ENST00000546039 USP32Q8NFA0 1604 aa15.13■□□□□ 0.01
PAAF1-216ENST00000546039 MINK1Q8N4C8 1332 aaPredicted RBP15.13■□□□□ 0.01
PAAF1-216ENST00000546039 RBM33Q96EV2 1170 aaKnown RBP15.11■□□□□ 0.01
PAAF1-216ENST00000546039 TESK2Q96S53 571 aa15.11■□□□□ 0.01
PAAF1-216ENST00000546039 C19orf44Q9H6X5 657 aa15.11■□□□□ 0.01
PAAF1-216ENST00000546039 EVC2Q86UK5 1308 aa15.1■□□□□ 0.01
PAAF1-216ENST00000546039 MYOM1P52179 1685 aa15.09■□□□□ 0.01
PAAF1-216ENST00000546039 KIF1AQ12756 1690 aa15.09■□□□□ 0.01
PAAF1-216ENST00000546039 ANKARQ7Z5J8 1434 aa15.09■□□□□ 0.01
PAAF1-216ENST00000546039 HIRIP3Q9BW71 556 aaPredicted RBP15.09■□□□□ 0.01
PAAF1-216ENST00000546039 ATP7BP35670 1465 aa15.08■□□□□ 0
PAAF1-216ENST00000546039 WASLO00401 505 aaPredicted RBP15.07■□□□□ 0
PAAF1-216ENST00000546039 ATF3P18847 181 aa15.07■□□□□ 0
PAAF1-216ENST00000546039 TMF1P82094 1093 aa15.07■□□□□ 0
PAAF1-216ENST00000546039 CADPS2Q86UW7 1296 aa15.07■□□□□ 0
PAAF1-216ENST00000546039 CERKQ8TCT0 537 aa15.07■□□□□ 0
PAAF1-216ENST00000546039 MST1RQ04912 1400 aa15.07■□□□□ 0
PAAF1-216ENST00000546039 AKAP12Q02952 1782 aa15.06■□□□□ 0
PAAF1-216ENST00000546039 DISP3Q9P2K9 1392 aa15.06■□□□□ 0
PAAF1-216ENST00000546039 ROBO1Q9Y6N7 1651 aa15.04■□□□□ -0
PAAF1-216ENST00000546039 ATAD2Q6PL18 1390 aa15.04■□□□□ -0
PAAF1-216ENST00000546039 CDCA8Q53HL2 280 aa15.04■□□□□ -0
PAAF1-216ENST00000546039 CDK19Q9BWU1 502 aa15.04■□□□□ -0
PAAF1-216ENST00000546039 C1orf167Q5SNV9 1468 aa15.03■□□□□ -0
PAAF1-216ENST00000546039 SRPK2P78362 688 aaKnown RBP15.03■□□□□ -0
PAAF1-216ENST00000546039 PUS7Q96PZ0 661 aaKnown RBP15.03■□□□□ -0
PAAF1-216ENST00000546039 NHSL1Q5SYE7 1610 aa15.03■□□□□ -0
PAAF1-216ENST00000546039 MON2Q7Z3U7 1717 aa15.02□□□□□ -0.01
PAAF1-216ENST00000546039 NINLQ9Y2I6 1382 aa15□□□□□ -0.01
PAAF1-216ENST00000546039 PRR36Q9H6K5 1346 aa15□□□□□ -0.01
PAAF1-216ENST00000546039 TOM1O60784 492 aa15□□□□□ -0.01
PAAF1-216ENST00000546039 ILDR1Q86SU0 546 aaPredicted RBP15□□□□□ -0.01
PAAF1-216ENST00000546039 CABP2Q9NPB3 220 aa15□□□□□ -0.01
PAAF1-216ENST00000546039 NUDT16Q96DE0 195 aaKnown RBP14.99□□□□□ -0.01
PAAF1-216ENST00000546039 PPIP5K1Q6PFW1 1433 aa14.99□□□□□ -0.01
PAAF1-216ENST00000546039 NUTM2FA1L443 756 aa14.98□□□□□ -0.01
PAAF1-216ENST00000546039 SLAIN2Q9P270 581 aa14.98□□□□□ -0.01
PAAF1-216ENST00000546039 CCDC7Q96M83 1385 aa14.98□□□□□ -0.01
PAAF1-216ENST00000546039 KIF7Q2M1P5 1343 aa14.97□□□□□ -0.01
PAAF1-216ENST00000546039 AHDC1Q5TGY3 1603 aaPredicted RBP14.97□□□□□ -0.01
PAAF1-216ENST00000546039 UBAP1LF5GYI3 381 aa14.97□□□□□ -0.01
PAAF1-216ENST00000546039 CCDC61Q9Y6R9 512 aa14.97□□□□□ -0.01
PAAF1-216ENST00000546039 NRKQ7Z2Y5 1582 aa14.97□□□□□ -0.01
PAAF1-216ENST00000546039 PHLPP1O60346 1717 aa14.97□□□□□ -0.01
PAAF1-216ENST00000546039 TRPM3Q9HCF6 1732 aaPredicted RBP14.96□□□□□ -0.01
PAAF1-216ENST00000546039 KIF20BQ96Q89 1820 aa14.95□□□□□ -0.02
PAAF1-216ENST00000546039 C11orf95C9JLR9 678 aaPredicted RBP14.95□□□□□ -0.02
PAAF1-216ENST00000546039 WASHC2AQ641Q2 1341 aa14.94□□□□□ -0.02
PAAF1-216ENST00000546039 ESCO1Q5FWF5 840 aa14.94□□□□□ -0.02
PAAF1-216ENST00000546039 POLR3GLQ9BT43 218 aa14.94□□□□□ -0.02
PAAF1-216ENST00000546039 PHF8Q9UPP1 1060 aa14.94□□□□□ -0.02
PAAF1-216ENST00000546039 POLR3AO14802 1390 aaPredicted RBP14.94□□□□□ -0.02
PAAF1-216ENST00000546039 PLEKHG3A1L390 1219 aa14.93□□□□□ -0.02
PAAF1-216ENST00000546039 BRINP3Q76B58 766 aa14.93□□□□□ -0.02
PAAF1-216ENST00000546039 ORAI2Q96SN7 254 aa14.93□□□□□ -0.02
PAAF1-216ENST00000546039 CD163L1Q9NR16 1453 aa14.93□□□□□ -0.02
PAAF1-216ENST00000546039 ZNF316A6NFI3 1004 aaPredicted RBP14.92□□□□□ -0.02
PAAF1-216ENST00000546039 TMC1Q8TDI8 760 aa14.92□□□□□ -0.02
PAAF1-216ENST00000546039 ANKRD36BQ8N2N9 1353 aa14.92□□□□□ -0.02
PAAF1-216ENST00000546039 COL16A1Q07092 1604 aaPredicted RBP14.92□□□□□ -0.02
PAAF1-216ENST00000546039 CPSF1Q10570 1443 aaKnown RBP14.92□□□□□ -0.02
PAAF1-216ENST00000546039 ALS2Q96Q42 1657 aa14.91□□□□□ -0.02
PAAF1-216ENST00000546039 CABP1Q9NZU7 370 aa14.91□□□□□ -0.02
PAAF1-216ENST00000546039 ANKRD26Q9UPS8 1709 aa14.91□□□□□ -0.02
PAAF1-216ENST00000546039 NPHP3Q7Z494 1330 aa14.91□□□□□ -0.02
PAAF1-216ENST00000546039 PXDNQ92626 1479 aa14.9□□□□□ -0.02
PAAF1-216ENST00000546039 A0A1W2PP64 1363 aa14.9□□□□□ -0.02
PAAF1-216ENST00000546039 NGDNQ8NEJ9 315 aaKnown RBP14.9□□□□□ -0.02
PAAF1-216ENST00000546039 PMFBP1Q8TBY8 1022 aa14.9□□□□□ -0.02
PAAF1-216ENST00000546039 TERF2IPQ9NYB0 399 aa14.9□□□□□ -0.02
PAAF1-216ENST00000546039 USP6P35125 1406 aa14.9□□□□□ -0.02
PAAF1-216ENST00000546039 USP54Q70EL1 1684 aa14.9□□□□□ -0.02
PAAF1-216ENST00000546039 ACEP12821 1306 aa14.9□□□□□ -0.02
PAAF1-216ENST00000546039 SCAF1Q9H7N4 1312 aaKnown RBP14.9□□□□□ -0.02
PAAF1-216ENST00000546039 BRD4O60885 1362 aaPredicted RBP14.89□□□□□ -0.03
PAAF1-216ENST00000546039 PIP4K2BP78356 416 aa14.89□□□□□ -0.03
PAAF1-216ENST00000546039 HDGFL2Q7Z4V5 671 aaPredicted RBP14.89□□□□□ -0.03
PAAF1-216ENST00000546039 SLC12A5Q9H2X9 1139 aa14.89□□□□□ -0.03
PAAF1-216ENST00000546039 PIK3C2AO00443 1686 aa14.88□□□□□ -0.03
PAAF1-216ENST00000546039 EDC4Q6P2E9 1401 aaKnown RBP14.88□□□□□ -0.03
PAAF1-216ENST00000546039 KTN1Q86UP2 1357 aaKnown RBP14.87□□□□□ -0.03
PAAF1-216ENST00000546039 ZNF692Q9BU19 519 aaPredicted RBP14.87□□□□□ -0.03
PAAF1-216ENST00000546039 SHPRHQ149N8 1683 aa14.87□□□□□ -0.03
PAAF1-216ENST00000546039 MARF1Q9Y4F3 1742 aaKnown RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms