RNA–Protein interactions for RNA: ENST00000545170.5

ATXN3-216, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 6,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-216ENST00000545170 RABEP1Q15276 862 aa10.32□□□□□ -0.76
ATXN3-216ENST00000545170 CCDC181Q5TID7 509 aa10.32□□□□□ -0.76
ATXN3-216ENST00000545170 SDF4Q9BRK5 362 aa10.32□□□□□ -0.76
ATXN3-216ENST00000545170 UBXN4Q92575 508 aa10.32□□□□□ -0.76
ATXN3-216ENST00000545170 TNIKQ9UKE5 1360 aa10.32□□□□□ -0.76
ATXN3-216ENST00000545170 NBPF1Q3BBV0 1214 aa10.32□□□□□ -0.76
ATXN3-216ENST00000545170 FMNL2Q96PY5 1086 aa10.32□□□□□ -0.76
ATXN3-216ENST00000545170 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.32□□□□□ -0.76
ATXN3-216ENST00000545170 GBP2P32456 591 aaPredicted RBP10.31□□□□□ -0.76
ATXN3-216ENST00000545170 SYNE3Q6ZMZ3 975 aa10.31□□□□□ -0.76
ATXN3-216ENST00000545170 CCDC9Q9Y3X0 531 aaKnown RBP10.31□□□□□ -0.76
ATXN3-216ENST00000545170 LMOD2Q6P5Q4 547 aa10.31□□□□□ -0.76
ATXN3-216ENST00000545170 RUFY2Q8WXA3 655 aa10.31□□□□□ -0.76
ATXN3-216ENST00000545170 CFAP45Q9UL16 551 aa10.31□□□□□ -0.76
ATXN3-216ENST00000545170 MYBBP1AQ9BQG0 1328 aaKnown RBP10.31□□□□□ -0.76
ATXN3-216ENST00000545170 MICALCLQ6ZW33 695 aa10.31□□□□□ -0.76
ATXN3-216ENST00000545170 CCDC192P0DO97 292 aa10.31□□□□□ -0.76
ATXN3-216ENST00000545170 SSR1P43307 286 aaKnown RBP10.31□□□□□ -0.76
ATXN3-216ENST00000545170 KIF15Q9NS87 1388 aa10.31□□□□□ -0.76
ATXN3-216ENST00000545170 DYNC1I1O14576 645 aa10.31□□□□□ -0.76
ATXN3-216ENST00000545170 BRPF1P55201 1214 aaPredicted RBP10.31□□□□□ -0.76
ATXN3-216ENST00000545170 RRP7AQ9Y3A4 280 aaKnown RBP10.3□□□□□ -0.76
ATXN3-216ENST00000545170 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.3□□□□□ -0.76
ATXN3-216ENST00000545170 EPS15P42566 896 aa10.3□□□□□ -0.76
ATXN3-216ENST00000545170 CPLX1O14810 134 aa10.3□□□□□ -0.76
ATXN3-216ENST00000545170 VGLL3A8MV65 326 aa10.3□□□□□ -0.76
ATXN3-216ENST00000545170 MAP2K1Q02750 393 aaPredicted RBP10.3□□□□□ -0.76
ATXN3-216ENST00000545170 SLC26A8Q96RN1 970 aa10.3□□□□□ -0.76
ATXN3-216ENST00000545170 GTPBP4Q9BZE4 634 aaKnown RBP10.3□□□□□ -0.76
ATXN3-216ENST00000545170 SERPINC1P01008 464 aa10.3□□□□□ -0.76
ATXN3-216ENST00000545170 DHX8Q14562 1220 aaKnown RBP10.3□□□□□ -0.76
ATXN3-216ENST00000545170 FILIP1LQ4L180 1135 aa10.3□□□□□ -0.76
ATXN3-216ENST00000545170 OFD1O75665 1012 aa10.29□□□□□ -0.76
ATXN3-216ENST00000545170 ZFYVE27Q5T4F4 411 aa10.29□□□□□ -0.76
ATXN3-216ENST00000545170 SPAG9O60271 1321 aaKnown RBP10.29□□□□□ -0.76
ATXN3-216ENST00000545170 CPLX2Q6PUV4 134 aaKnown RBP10.29□□□□□ -0.76
ATXN3-216ENST00000545170 LMAN1P49257 510 aa10.29□□□□□ -0.76
ATXN3-216ENST00000545170 TXLNBQ8N3L3 684 aa10.29□□□□□ -0.76
ATXN3-216ENST00000545170 KINO60870 393 aaKnown RBP10.28□□□□□ -0.76
ATXN3-216ENST00000545170 CRACR2AQ9BSW2 395 aa10.28□□□□□ -0.76
ATXN3-216ENST00000545170 HDAC5Q9UQL6 1122 aa10.28□□□□□ -0.76
ATXN3-216ENST00000545170 MCM4P33991 863 aa10.28□□□□□ -0.76
ATXN3-216ENST00000545170 IQCEQ6IPM2 695 aa10.28□□□□□ -0.76
ATXN3-216ENST00000545170 BCCIPQ9P287 314 aaKnown RBP eCLIP10.28□□□□□ -0.76
ATXN3-216ENST00000545170 KIF7Q2M1P5 1343 aa10.27□□□□□ -0.76
ATXN3-216ENST00000545170 FIBPO43427 364 aa10.27□□□□□ -0.76
ATXN3-216ENST00000545170 FOXD1Q16676 465 aa10.27□□□□□ -0.76
ATXN3-216ENST00000545170 ANKRD18AQ8IVF6 992 aa10.27□□□□□ -0.76
ATXN3-216ENST00000545170 DDX19BQ9UMR2 479 aa10.27□□□□□ -0.76
ATXN3-216ENST00000545170 SARNPP82979 210 aaKnown RBP10.27□□□□□ -0.77
ATXN3-216ENST00000545170 TTC31Q49AM3 519 aaPredicted RBP10.27□□□□□ -0.77
ATXN3-216ENST00000545170 TNMDQ9H2S6 317 aa10.27□□□□□ -0.77
ATXN3-216ENST00000545170 LRRFIP2Q9Y608 721 aaKnown RBP10.27□□□□□ -0.77
ATXN3-216ENST00000545170 GBP3Q9H0R5 595 aa10.27□□□□□ -0.77
ATXN3-216ENST00000545170 PTPN14Q15678 1187 aa10.26□□□□□ -0.77
ATXN3-216ENST00000545170 FILIP1Q7Z7B0 1213 aa10.26□□□□□ -0.77
ATXN3-216ENST00000545170 PPFIBP1Q86W92 1011 aa10.26□□□□□ -0.77
ATXN3-216ENST00000545170 CEP63Q96MT8 703 aa10.26□□□□□ -0.77
ATXN3-216ENST00000545170 EIF3AQ14152 1382 aaKnown RBP10.26□□□□□ -0.77
ATXN3-216ENST00000545170 CDC45O75419 566 aa10.26□□□□□ -0.77
ATXN3-216ENST00000545170 SAFB2Q14151 953 aaKnown RBP eCLIP10.26□□□□□ -0.77
ATXN3-216ENST00000545170 LNPKQ9C0E8 428 aa10.26□□□□□ -0.77
ATXN3-216ENST00000545170 CFDP1Q9UEE9 299 aaPredicted RBP10.26□□□□□ -0.77
ATXN3-216ENST00000545170 CPSF2Q9P2I0 782 aaKnown RBP10.26□□□□□ -0.77
ATXN3-216ENST00000545170 ZNF330Q9Y3S2 320 aaPredicted RBP10.26□□□□□ -0.77
ATXN3-216ENST00000545170 CASQ1P31415 396 aa10.26□□□□□ -0.77
ATXN3-216ENST00000545170 CCDC91Q7Z6B0 441 aa10.26□□□□□ -0.77
ATXN3-216ENST00000545170 SRRTQ9BXP5 876 aaKnown RBP10.26□□□□□ -0.77
ATXN3-216ENST00000545170 SPATA24Q86W54 205 aa10.26□□□□□ -0.77
ATXN3-216ENST00000545170 BACH2Q9BYV9 841 aa10.26□□□□□ -0.77
ATXN3-216ENST00000545170 EZRP15311 586 aaKnown RBP10.25□□□□□ -0.77
ATXN3-216ENST00000545170 RAB3GAP2Q9H2M9 1393 aa10.25□□□□□ -0.77
ATXN3-216ENST00000545170 MAGEC2Q9UBF1 373 aaPredicted RBP10.25□□□□□ -0.77
ATXN3-216ENST00000545170 KIAA1328Q86T90 577 aa10.25□□□□□ -0.77
ATXN3-216ENST00000545170 HDGFL2Q7Z4V5 671 aaPredicted RBP10.25□□□□□ -0.77
ATXN3-216ENST00000545170 PAIP2Q9BPZ3 127 aaKnown RBP10.24□□□□□ -0.77
ATXN3-216ENST00000545170 NFXL1Q6ZNB6 911 aa10.24□□□□□ -0.77
ATXN3-216ENST00000545170 ZNHIT6Q9NWK9 470 aaKnown RBP10.24□□□□□ -0.77
ATXN3-216ENST00000545170 SYCE3A1L190 88 aa10.24□□□□□ -0.77
ATXN3-216ENST00000545170 MAP9Q49MG5 647 aa10.24□□□□□ -0.77
ATXN3-216ENST00000545170 TMCO5BA8MYB1 307 aa10.24□□□□□ -0.77
ATXN3-216ENST00000545170 CBFA2T2O43439 604 aa10.24□□□□□ -0.77
ATXN3-216ENST00000545170 NPM1P06748 294 aaKnown RBP eCLIP10.23□□□□□ -0.77
ATXN3-216ENST00000545170 DZIP1LQ8IYY4 767 aaKnown RBP10.23□□□□□ -0.77
ATXN3-216ENST00000545170 KRT222Q8N1A0 295 aa10.23□□□□□ -0.77
ATXN3-216ENST00000545170 KIF18AQ8NI77 898 aa10.23□□□□□ -0.77
ATXN3-216ENST00000545170 PRKRIP1Q9H875 184 aaPredicted RBP10.23□□□□□ -0.77
ATXN3-216ENST00000545170 CEBPZQ03701 1054 aaKnown RBP10.23□□□□□ -0.77
ATXN3-216ENST00000545170 SMAP1Q8IYB5 467 aaPredicted RBP10.23□□□□□ -0.77
ATXN3-216ENST00000545170 CCDC148Q8NFR7 591 aa10.23□□□□□ -0.77
ATXN3-216ENST00000545170 CWC22Q9HCG8 908 aaKnown RBP10.23□□□□□ -0.77
ATXN3-216ENST00000545170 NACADO15069 1562 aa10.23□□□□□ -0.77
ATXN3-216ENST00000545170 SAFBQ15424 915 aaKnown RBP eCLIP10.23□□□□□ -0.77
ATXN3-216ENST00000545170 CTR9Q6PD62 1173 aa10.23□□□□□ -0.77
ATXN3-216ENST00000545170 WDR66Q8TBY9 1149 aa10.23□□□□□ -0.77
ATXN3-216ENST00000545170 CCDC94Q9BW85 323 aaPredicted RBP10.23□□□□□ -0.77
ATXN3-216ENST00000545170 KIF2AO00139 706 aaPredicted RBP10.23□□□□□ -0.77
ATXN3-216ENST00000545170 BMS1Q14692 1282 aaKnown RBP10.23□□□□□ -0.77
ATXN3-216ENST00000545170 MICALL1Q8N3F8 863 aa10.23□□□□□ -0.77
ATXN3-216ENST00000545170 JAKMIP3Q5VZ66 844 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms