RNA–Protein interactions for RNA: ENST00000544409.5

LRTOMT-221, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best)

Gene LRTOMT, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-221ENST00000544409 NGEFQ8N5V2 710 aa16.04■□□□□ 0.16
LRTOMT-221ENST00000544409 YEATS2Q9ULM3 1422 aa16.04■□□□□ 0.16
LRTOMT-221ENST00000544409 MORC1Q86VD1 984 aa16.04■□□□□ 0.16
LRTOMT-221ENST00000544409 SLC12A5Q9H2X9 1139 aa16.04■□□□□ 0.16
LRTOMT-221ENST00000544409 PUS7Q96PZ0 661 aaKnown RBP16.03■□□□□ 0.16
LRTOMT-221ENST00000544409 NUTM2DQ5VT03 806 aaPredicted RBP16.03■□□□□ 0.16
LRTOMT-221ENST00000544409 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.03■□□□□ 0.16
LRTOMT-221ENST00000544409 SLC52A1Q9NWF4 448 aa16.03■□□□□ 0.16
LRTOMT-221ENST00000544409 EVC2Q86UK5 1308 aa16.03■□□□□ 0.16
LRTOMT-221ENST00000544409 IDI1Q13907 227 aa16.02■□□□□ 0.15
LRTOMT-221ENST00000544409 TRMT2AQ8IZ69 625 aaKnown RBP16.02■□□□□ 0.15
LRTOMT-221ENST00000544409 ZFYVE9O95405 1425 aa16.02■□□□□ 0.15
LRTOMT-221ENST00000544409 PREX1Q8TCU6 1659 aa16.02■□□□□ 0.15
LRTOMT-221ENST00000544409 MYO5BQ9ULV0 1848 aa16■□□□□ 0.15
LRTOMT-221ENST00000544409 CGNL1Q0VF96 1302 aa16■□□□□ 0.15
LRTOMT-221ENST00000544409 TULP4Q9NRJ4 1543 aa16■□□□□ 0.15
LRTOMT-221ENST00000544409 NKTRP30414 1462 aaKnown RBP16■□□□□ 0.15
LRTOMT-221ENST00000544409 C20orf194Q5TEA3 1177 aa16■□□□□ 0.15
LRTOMT-221ENST00000544409 SHPRHQ149N8 1683 aa16■□□□□ 0.15
LRTOMT-221ENST00000544409 E9PSI1 815 aa15.99■□□□□ 0.15
LRTOMT-221ENST00000544409 LAS1LQ9Y4W2 734 aaKnown RBP15.99■□□□□ 0.15
LRTOMT-221ENST00000544409 NEFMP07197 916 aa15.99■□□□□ 0.15
LRTOMT-221ENST00000544409 MS4A1P11836 297 aa15.99■□□□□ 0.15
LRTOMT-221ENST00000544409 TMEM131LA2VDJ0 1609 aa15.98■□□□□ 0.15
LRTOMT-221ENST00000544409 ANKRD36BQ8N2N9 1353 aa15.98■□□□□ 0.15
LRTOMT-221ENST00000544409 CYB5RLQ6IPT4 315 aa15.97■□□□□ 0.15
LRTOMT-221ENST00000544409 NSD2O96028 1365 aa15.97■□□□□ 0.15
LRTOMT-221ENST00000544409 TNNT2P45379 298 aaPredicted RBP15.97■□□□□ 0.15
LRTOMT-221ENST00000544409 BRPF3Q9ULD4 1205 aa15.97■□□□□ 0.15
LRTOMT-221ENST00000544409 NPM2Q86SE8 214 aaKnown RBP15.96■□□□□ 0.15
LRTOMT-221ENST00000544409 SPINK5Q9NQ38 1064 aaPredicted RBP15.96■□□□□ 0.15
LRTOMT-221ENST00000544409 CFAP53Q96M91 514 aa15.95■□□□□ 0.14
LRTOMT-221ENST00000544409 PDE4AP27815 886 aa15.94■□□□□ 0.14
LRTOMT-221ENST00000544409 RUNDC1Q96C34 613 aa15.94■□□□□ 0.14
LRTOMT-221ENST00000544409 CABP2Q9NPB3 220 aa15.94■□□□□ 0.14
LRTOMT-221ENST00000544409 NINLQ9Y2I6 1382 aa15.94■□□□□ 0.14
LRTOMT-221ENST00000544409 STK26Q9P289 416 aa15.93■□□□□ 0.14
LRTOMT-221ENST00000544409 DIP2BQ9P265 1576 aa15.93■□□□□ 0.14
LRTOMT-221ENST00000544409 MTHFSP49914 203 aa15.93■□□□□ 0.14
LRTOMT-221ENST00000544409 FAM69CQ0P6D2 419 aa15.93■□□□□ 0.14
LRTOMT-221ENST00000544409 SAFB2Q14151 953 aaKnown RBP eCLIP15.93■□□□□ 0.14
LRTOMT-221ENST00000544409 WWC1Q8IX03 1113 aa15.93■□□□□ 0.14
LRTOMT-221ENST00000544409 CENPQQ7L2Z9 268 aaPredicted RBP15.92■□□□□ 0.14
LRTOMT-221ENST00000544409 KDM2BQ8NHM5 1336 aa15.92■□□□□ 0.14
LRTOMT-221ENST00000544409 BACH2Q9BYV9 841 aa15.92■□□□□ 0.14
LRTOMT-221ENST00000544409 DMRT2Q9Y5R5 561 aa15.91■□□□□ 0.14
LRTOMT-221ENST00000544409 PTPRMP28827 1452 aa15.91■□□□□ 0.14
LRTOMT-221ENST00000544409 IQSEC2Q5JU85 1478 aa15.91■□□□□ 0.14
LRTOMT-221ENST00000544409 RIMBP3CA6NJZ7 1639 aa15.91■□□□□ 0.14
LRTOMT-221ENST00000544409 RIMBP3BA6NNM3 1639 aa15.91■□□□□ 0.14
LRTOMT-221ENST00000544409 RIMBP3Q9UFD9 1639 aa15.91■□□□□ 0.14
LRTOMT-221ENST00000544409 REREQ9P2R6 1566 aa15.9■□□□□ 0.14
LRTOMT-221ENST00000544409 SRPK2P78362 688 aaKnown RBP15.9■□□□□ 0.14
LRTOMT-221ENST00000544409 TSPOAP1O95153 1857 aa15.9■□□□□ 0.14
LRTOMT-221ENST00000544409 YTHDC2Q9H6S0 1430 aaKnown RBP15.9■□□□□ 0.14
LRTOMT-221ENST00000544409 ATAD2Q6PL18 1390 aa15.89■□□□□ 0.13
LRTOMT-221ENST00000544409 BCAR3O75815 825 aa15.89■□□□□ 0.13
LRTOMT-221ENST00000544409 FBXO31Q5XUX0 539 aaPredicted RBP15.89■□□□□ 0.13
LRTOMT-221ENST00000544409 CLTCQ00610 1675 aaKnown RBP15.89■□□□□ 0.13
LRTOMT-221ENST00000544409 TCP11L2Q8N4U5 519 aa15.89■□□□□ 0.13
LRTOMT-221ENST00000544409 PKNOX2Q96KN3 472 aa15.89■□□□□ 0.13
LRTOMT-221ENST00000544409 SENP3Q9H4L4 574 aaPredicted RBP15.89■□□□□ 0.13
LRTOMT-221ENST00000544409 AGLP35573 1532 aa15.88■□□□□ 0.13
LRTOMT-221ENST00000544409 POGKQ9P215 609 aa15.88■□□□□ 0.13
LRTOMT-221ENST00000544409 A0A1W2PP64 1363 aa15.88■□□□□ 0.13
LRTOMT-221ENST00000544409 ABCC11Q96J66 1382 aa15.88■□□□□ 0.13
LRTOMT-221ENST00000544409 STAG3Q9UJ98 1225 aa15.88■□□□□ 0.13
LRTOMT-221ENST00000544409 PPP6R1Q9UPN7 881 aa15.88■□□□□ 0.13
LRTOMT-221ENST00000544409 ALKQ9UM73 1620 aa15.88■□□□□ 0.13
LRTOMT-221ENST00000544409 NEUROD2Q15784 382 aa15.87■□□□□ 0.13
LRTOMT-221ENST00000544409 PRAM1Q96QH2 718 aa15.87■□□□□ 0.13
LRTOMT-221ENST00000544409 DNAJC5Q9H3Z4 198 aa15.87■□□□□ 0.13
LRTOMT-221ENST00000544409 MINK1Q8N4C8 1332 aaPredicted RBP15.87■□□□□ 0.13
LRTOMT-221ENST00000544409 RRP7AQ9Y3A4 280 aaKnown RBP15.87■□□□□ 0.13
LRTOMT-221ENST00000544409 WDR63Q8IWG1 891 aa15.86■□□□□ 0.13
LRTOMT-221ENST00000544409 PHF23Q9BUL5 403 aaPredicted RBP15.86■□□□□ 0.13
LRTOMT-221ENST00000544409 TERF2IPQ9NYB0 399 aa15.86■□□□□ 0.13
LRTOMT-221ENST00000544409 ANKRD26Q9UPS8 1709 aa15.86■□□□□ 0.13
LRTOMT-221ENST00000544409 CCDC27Q2M243 656 aa15.85■□□□□ 0.13
LRTOMT-221ENST00000544409 NCBP3Q53F19 620 aaKnown RBP15.85■□□□□ 0.13
LRTOMT-221ENST00000544409 USP35Q9P2H5 1018 aa15.85■□□□□ 0.13
LRTOMT-221ENST00000544409 PDE3AQ14432 1141 aa15.85■□□□□ 0.13
LRTOMT-221ENST00000544409 SKAP1Q86WV1 359 aa15.84■□□□□ 0.13
LRTOMT-221ENST00000544409 U2AF1L5P0DN76 240 aaPredicted RBP15.84■□□□□ 0.13
LRTOMT-221ENST00000544409 CANXP27824 592 aaKnown RBP15.84■□□□□ 0.13
LRTOMT-221ENST00000544409 U2AF1Q01081 240 aaKnown RBP eCLIP15.84■□□□□ 0.13
LRTOMT-221ENST00000544409 MED14O60244 1454 aa15.83■□□□□ 0.12
LRTOMT-221ENST00000544409 SPATA31D1Q6ZQQ2 1576 aa15.83■□□□□ 0.12
LRTOMT-221ENST00000544409 ADGRB2O60241 1585 aa15.82■□□□□ 0.12
LRTOMT-221ENST00000544409 GGNBP2Q9H3C7 697 aa15.82■□□□□ 0.12
LRTOMT-221ENST00000544409 HDGFL2Q7Z4V5 671 aaPredicted RBP15.81■□□□□ 0.12
LRTOMT-221ENST00000544409 CD163L1Q9NR16 1453 aa15.81■□□□□ 0.12
LRTOMT-221ENST00000544409 A2ML1A8K2U0 1454 aa15.81■□□□□ 0.12
LRTOMT-221ENST00000544409 CDK19Q9BWU1 502 aa15.8■□□□□ 0.12
LRTOMT-221ENST00000544409 ARHGEF40Q8TER5 1519 aa15.8■□□□□ 0.12
LRTOMT-221ENST00000544409 DLC1Q96QB1 1528 aa15.8■□□□□ 0.12
LRTOMT-221ENST00000544409 MYH16Q9H6N6 1097 aa15.8■□□□□ 0.12
LRTOMT-221ENST00000544409 RARSP54136 660 aaKnown RBP15.79■□□□□ 0.12
LRTOMT-221ENST00000544409 KIF20BQ96Q89 1820 aa15.79■□□□□ 0.12
LRTOMT-221ENST00000544409 RIMS2Q9UQ26 1411 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms