RNA–Protein interactions for RNA: ENST00000544241.6

TCF4-209, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,264 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-209ENST00000544241 TSPY4P0CV99 314 aa12.91□□□□□ -0.34
TCF4-209ENST00000544241 TSPY10P0CW01 314 aa12.91□□□□□ -0.34
TCF4-209ENST00000544241 NBPF1Q3BBV0 1214 aa12.91□□□□□ -0.34
TCF4-209ENST00000544241 SPINK5Q9NQ38 1064 aaPredicted RBP12.91□□□□□ -0.34
TCF4-209ENST00000544241 C9orf84Q5VXU9 1444 aa12.9□□□□□ -0.34
TCF4-209ENST00000544241 A0A0U1RQG5 324 aaPredicted RBP12.9□□□□□ -0.34
TCF4-209ENST00000544241 ARID3CA6NKF2 412 aa12.9□□□□□ -0.34
TCF4-209ENST00000544241 CLEC17AQ6ZS10 378 aa12.9□□□□□ -0.34
TCF4-209ENST00000544241 SYNMO15061 1565 aa12.9□□□□□ -0.34
TCF4-209ENST00000544241 NUP153P49790 1475 aaKnown RBP12.9□□□□□ -0.35
TCF4-209ENST00000544241 CCDC141Q6ZP82 1450 aa12.9□□□□□ -0.35
TCF4-209ENST00000544241 WDR7Q9Y4E6 1490 aa12.9□□□□□ -0.35
TCF4-209ENST00000544241 PCDHB15Q9Y5E8 787 aa12.9□□□□□ -0.35
TCF4-209ENST00000544241 ZNF445P59923 1031 aa12.89□□□□□ -0.35
TCF4-209ENST00000544241 SASS6Q6UVJ0 657 aa12.89□□□□□ -0.35
TCF4-209ENST00000544241 CCDC146Q8IYE0 955 aa12.89□□□□□ -0.35
TCF4-209ENST00000544241 ZNF777Q9ULD5 760 aaPredicted RBP12.89□□□□□ -0.35
TCF4-209ENST00000544241 RAPGEF6Q8TEU7 1601 aa12.89□□□□□ -0.35
TCF4-209ENST00000544241 CCDC94Q9BW85 323 aaPredicted RBP12.88□□□□□ -0.35
TCF4-209ENST00000544241 DDX49Q9Y6V7 483 aaKnown RBP12.88□□□□□ -0.35
TCF4-209ENST00000544241 MAGI2Q86UL8 1455 aa12.88□□□□□ -0.35
TCF4-209ENST00000544241 ADCY10Q96PN6 1610 aa12.88□□□□□ -0.35
TCF4-209ENST00000544241 RARSP54136 660 aaKnown RBP12.88□□□□□ -0.35
TCF4-209ENST00000544241 DMTNQ08495 405 aa12.88□□□□□ -0.35
TCF4-209ENST00000544241 KIF20AO95235 890 aa12.87□□□□□ -0.35
TCF4-209ENST00000544241 WWC1Q8IX03 1113 aa12.87□□□□□ -0.35
TCF4-209ENST00000544241 ZKSCAN5Q9Y2L8 839 aa12.87□□□□□ -0.35
TCF4-209ENST00000544241 GTPBP4Q9BZE4 634 aaKnown RBP12.86□□□□□ -0.35
TCF4-209ENST00000544241 CCDC39Q9UFE4 941 aa12.86□□□□□ -0.35
TCF4-209ENST00000544241 CHD1O14646 1710 aa12.86□□□□□ -0.35
TCF4-209ENST00000544241 FAM135AQ9P2D6 1515 aa12.86□□□□□ -0.35
TCF4-209ENST00000544241 A2MP01023 1474 aa12.86□□□□□ -0.35
TCF4-209ENST00000544241 HDAC1Q13547 482 aaPredicted RBP12.86□□□□□ -0.35
TCF4-209ENST00000544241 PDLIM2Q96JY6 352 aa12.86□□□□□ -0.35
TCF4-209ENST00000544241 MVPQ14764 893 aaKnown RBP12.85□□□□□ -0.35
TCF4-209ENST00000544241 ARHGAP31Q2M1Z3 1444 aa12.85□□□□□ -0.35
TCF4-209ENST00000544241 WDR63Q8IWG1 891 aa12.85□□□□□ -0.35
TCF4-209ENST00000544241 KIF16BQ96L93 1317 aa12.84□□□□□ -0.35
TCF4-209ENST00000544241 K7ELQ4 463 aaPredicted RBP12.84□□□□□ -0.35
TCF4-209ENST00000544241 RGL3Q3MIN7 710 aa12.84□□□□□ -0.35
TCF4-209ENST00000544241 FTSJ3Q8IY81 847 aaKnown RBP12.84□□□□□ -0.35
TCF4-209ENST00000544241 CT47B1P0C2W7 299 aaPredicted RBP12.83□□□□□ -0.35
TCF4-209ENST00000544241 HMGN5P82970 282 aaKnown RBP12.83□□□□□ -0.35
TCF4-209ENST00000544241 PRG4Q92954 1404 aaPredicted RBP12.83□□□□□ -0.36
TCF4-209ENST00000544241 KIAA0556O60303 1618 aa12.83□□□□□ -0.36
TCF4-209ENST00000544241 NUCB2P80303 420 aa12.83□□□□□ -0.36
TCF4-209ENST00000544241 TAF3Q5VWG9 929 aa12.83□□□□□ -0.36
TCF4-209ENST00000544241 LETM1O95202 739 aaPredicted RBP12.82□□□□□ -0.36
TCF4-209ENST00000544241 NCBP3Q53F19 620 aaKnown RBP12.82□□□□□ -0.36
TCF4-209ENST00000544241 ZKSCAN2Q63HK3 967 aa12.82□□□□□ -0.36
TCF4-209ENST00000544241 STAC3Q96MF2 364 aa12.82□□□□□ -0.36
TCF4-209ENST00000544241 CFAP44Q96MT7 982 aa12.82□□□□□ -0.36
TCF4-209ENST00000544241 RNF17Q9BXT8 1623 aaKnown RBP12.82□□□□□ -0.36
TCF4-209ENST00000544241 KANK1Q14678 1352 aa12.82□□□□□ -0.36
TCF4-209ENST00000544241 XPCQ01831 940 aaPredicted RBP12.81□□□□□ -0.36
TCF4-209ENST00000544241 PRIMPOLQ96LW4 560 aa12.81□□□□□ -0.36
TCF4-209ENST00000544241 DDX19BQ9UMR2 479 aa12.81□□□□□ -0.36
TCF4-209ENST00000544241 BAG4O95429 457 aaKnown RBP12.81□□□□□ -0.36
TCF4-209ENST00000544241 RSPH4AQ5TD94 716 aa12.81□□□□□ -0.36
TCF4-209ENST00000544241 DZIP1LQ8IYY4 767 aaKnown RBP12.81□□□□□ -0.36
TCF4-209ENST00000544241 POLR3AO14802 1390 aaPredicted RBP12.8□□□□□ -0.36
TCF4-209ENST00000544241 SHROOM2Q13796 1616 aa12.8□□□□□ -0.36
TCF4-209ENST00000544241 RLBP1P12271 317 aa12.8□□□□□ -0.36
TCF4-209ENST00000544241 CCDC27Q2M243 656 aa12.79□□□□□ -0.36
TCF4-209ENST00000544241 ZSCAN20P17040 1043 aaPredicted RBP12.79□□□□□ -0.36
TCF4-209ENST00000544241 ZSCAN23Q3MJ62 389 aa12.79□□□□□ -0.36
TCF4-209ENST00000544241 RUNDC1Q96C34 613 aa12.79□□□□□ -0.36
TCF4-209ENST00000544241 ZHX1Q9UKY1 873 aaPredicted RBP12.79□□□□□ -0.36
TCF4-209ENST00000544241 ARHGEF5Q12774 1597 aa12.79□□□□□ -0.36
TCF4-209ENST00000544241 KIAA2012Q0VF49 1180 aa12.78□□□□□ -0.36
TCF4-209ENST00000544241 JPH4Q96JJ6 628 aa12.78□□□□□ -0.36
TCF4-209ENST00000544241 DMRT2Q9Y5R5 561 aa12.78□□□□□ -0.36
TCF4-209ENST00000544241 CDC42BPAQ5VT25 1732 aa12.78□□□□□ -0.36
TCF4-209ENST00000544241 PDE4CQ08493 712 aa12.78□□□□□ -0.36
TCF4-209ENST00000544241 BMP2KLQ5H9B9 411 aa12.78□□□□□ -0.36
TCF4-209ENST00000544241 MYRIPQ8NFW9 859 aa12.78□□□□□ -0.36
TCF4-209ENST00000544241 ATP10AO60312 1499 aa12.77□□□□□ -0.36
TCF4-209ENST00000544241 DISP1Q96F81 1524 aa12.77□□□□□ -0.36
TCF4-209ENST00000544241 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.77□□□□□ -0.36
TCF4-209ENST00000544241 MYO5CQ9NQX4 1742 aa12.77□□□□□ -0.37
TCF4-209ENST00000544241 CAVIN1Q6NZI2 390 aaKnown RBP12.77□□□□□ -0.37
TCF4-209ENST00000544241 SCAF11Q99590 1463 aaKnown RBP12.77□□□□□ -0.37
TCF4-209ENST00000544241 SSFA2P28290 1259 aa12.76□□□□□ -0.37
TCF4-209ENST00000544241 PHF23Q9BUL5 403 aaPredicted RBP12.76□□□□□ -0.37
TCF4-209ENST00000544241 CWC22Q9HCG8 908 aaKnown RBP12.76□□□□□ -0.37
TCF4-209ENST00000544241 DNTTIP2Q5QJE6 756 aaKnown RBP12.76□□□□□ -0.37
TCF4-209ENST00000544241 OSCARQ8IYS5 282 aa12.76□□□□□ -0.37
TCF4-209ENST00000544241 CHMP4BQ9H444 224 aaKnown RBP12.75□□□□□ -0.37
TCF4-209ENST00000544241 IQGAP1P46940 1657 aa12.75□□□□□ -0.37
TCF4-209ENST00000544241 GTF2F1P35269 517 aaKnown RBP eCLIP12.74□□□□□ -0.37
TCF4-209ENST00000544241 MCTP1Q6DN14 999 aa12.74□□□□□ -0.37
TCF4-209ENST00000544241 LRSAM1Q6UWE0 723 aa12.74□□□□□ -0.37
TCF4-209ENST00000544241 RBSNQ9H1K0 784 aa12.74□□□□□ -0.37
TCF4-209ENST00000544241 PRDM10Q9NQV6 1147 aa12.74□□□□□ -0.37
TCF4-209ENST00000544241 PLA2R1Q13018 1463 aa12.74□□□□□ -0.37
TCF4-209ENST00000544241 PTMAP06454 111 aaKnown RBP12.74□□□□□ -0.37
TCF4-209ENST00000544241 NUCB1Q02818 461 aa12.74□□□□□ -0.37
TCF4-209ENST00000544241 PPP4R3BQ5MIZ7 849 aa12.74□□□□□ -0.37
TCF4-209ENST00000544241 PLEKHD1A6NEE1 506 aa12.73□□□□□ -0.37
TCF4-209ENST00000544241 UNC13BO14795 1591 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms