RNA–Protein interactions for RNA: ENST00000544231.1

SSPN-208, Transcript of sarcospan, humanhuman

TSL 4

Gene SSPN, Length 572 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-208ENST00000544231 IQSEC2Q5JU85 1478 aa20.56■□□□□ 0.88
SSPN-208ENST00000544231 RBM33Q96EV2 1170 aaKnown RBP20.56■□□□□ 0.88
SSPN-208ENST00000544231 C19orf44Q9H6X5 657 aa20.56■□□□□ 0.88
SSPN-208ENST00000544231 ST20-MTHFSA0A0A6YYL1 179 aa20.55■□□□□ 0.88
SSPN-208ENST00000544231 SBNO2Q9Y2G9 1366 aa20.55■□□□□ 0.88
SSPN-208ENST00000544231 MINK1Q8N4C8 1332 aaPredicted RBP20.53■□□□□ 0.88
SSPN-208ENST00000544231 DCCP43146 1447 aa20.53■□□□□ 0.88
SSPN-208ENST00000544231 CERKQ8TCT0 537 aa20.53■□□□□ 0.88
SSPN-208ENST00000544231 QRICH2Q9H0J4 1663 aa20.53■□□□□ 0.88
SSPN-208ENST00000544231 HSPA5P11021 654 aaKnown RBP20.52■□□□□ 0.88
SSPN-208ENST00000544231 ATF3P18847 181 aa20.52■□□□□ 0.88
SSPN-208ENST00000544231 CADPS2Q86UW7 1296 aa20.52■□□□□ 0.88
SSPN-208ENST00000544231 ADGRB2O60241 1585 aa20.51■□□□□ 0.87
SSPN-208ENST00000544231 NALCNQ8IZF0 1738 aa20.51■□□□□ 0.87
SSPN-208ENST00000544231 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.51■□□□□ 0.87
SSPN-208ENST00000544231 CDC42BPGQ6DT37 1551 aa20.51■□□□□ 0.87
SSPN-208ENST00000544231 XIRP1Q702N8 1843 aaKnown RBP20.5■□□□□ 0.87
SSPN-208ENST00000544231 EVC2Q86UK5 1308 aa20.5■□□□□ 0.87
SSPN-208ENST00000544231 HIRIP3Q9BW71 556 aaPredicted RBP20.49■□□□□ 0.87
SSPN-208ENST00000544231 WASLO00401 505 aaPredicted RBP20.48■□□□□ 0.87
SSPN-208ENST00000544231 TMF1P82094 1093 aa20.47■□□□□ 0.87
SSPN-208ENST00000544231 TESK2Q96S53 571 aa20.47■□□□□ 0.87
SSPN-208ENST00000544231 CDCA8Q53HL2 280 aa20.46■□□□□ 0.87
SSPN-208ENST00000544231 TOM1O60784 492 aa20.44■□□□□ 0.86
SSPN-208ENST00000544231 SRPK2P78362 688 aaKnown RBP20.44■□□□□ 0.86
SSPN-208ENST00000544231 CDK19Q9BWU1 502 aa20.44■□□□□ 0.86
SSPN-208ENST00000544231 ANKARQ7Z5J8 1434 aa20.43■□□□□ 0.86
SSPN-208ENST00000544231 TULP4Q9NRJ4 1543 aa20.43■□□□□ 0.86
SSPN-208ENST00000544231 PUS7Q96PZ0 661 aaKnown RBP20.41■□□□□ 0.86
SSPN-208ENST00000544231 FMN2Q9NZ56 1722 aa20.41■□□□□ 0.86
SSPN-208ENST00000544231 UBAP1LF5GYI3 381 aa20.4■□□□□ 0.86
SSPN-208ENST00000544231 MST1RQ04912 1400 aa20.4■□□□□ 0.86
SSPN-208ENST00000544231 ATAD2Q6PL18 1390 aa20.4■□□□□ 0.86
SSPN-208ENST00000544231 SLAIN2Q9P270 581 aa20.4■□□□□ 0.86
SSPN-208ENST00000544231 C1orf167Q5SNV9 1468 aa20.38■□□□□ 0.85
SSPN-208ENST00000544231 CABP2Q9NPB3 220 aa20.38■□□□□ 0.85
SSPN-208ENST00000544231 DISP3Q9P2K9 1392 aa20.37■□□□□ 0.85
SSPN-208ENST00000544231 NUTM2FA1L443 756 aa20.37■□□□□ 0.85
SSPN-208ENST00000544231 NUDT16Q96DE0 195 aaKnown RBP20.37■□□□□ 0.85
SSPN-208ENST00000544231 CCDC61Q9Y6R9 512 aa20.36■□□□□ 0.85
SSPN-208ENST00000544231 ATP7BP35670 1465 aa20.36■□□□□ 0.85
SSPN-208ENST00000544231 ESCO1Q5FWF5 840 aa20.34■□□□□ 0.85
SSPN-208ENST00000544231 NINLQ9Y2I6 1382 aa20.34■□□□□ 0.85
SSPN-208ENST00000544231 PRR36Q9H6K5 1346 aa20.33■□□□□ 0.85
SSPN-208ENST00000544231 ITSN1Q15811 1721 aa20.33■□□□□ 0.84
SSPN-208ENST00000544231 USP32Q8NFA0 1604 aa20.31■□□□□ 0.84
SSPN-208ENST00000544231 PHF8Q9UPP1 1060 aa20.31■□□□□ 0.84
SSPN-208ENST00000544231 SCAF1Q9H7N4 1312 aaKnown RBP20.3■□□□□ 0.84
SSPN-208ENST00000544231 PPIP5K1Q6PFW1 1433 aa20.3■□□□□ 0.84
SSPN-208ENST00000544231 PIP4K2BP78356 416 aa20.3■□□□□ 0.84
SSPN-208ENST00000544231 POLR3GLQ9BT43 218 aa20.3■□□□□ 0.84
SSPN-208ENST00000544231 KIF1AQ12756 1690 aa20.29■□□□□ 0.84
SSPN-208ENST00000544231 BRINP3Q76B58 766 aa20.29■□□□□ 0.84
SSPN-208ENST00000544231 TMC1Q8TDI8 760 aa20.29■□□□□ 0.84
SSPN-208ENST00000544231 ORAI2Q96SN7 254 aa20.29■□□□□ 0.84
SSPN-208ENST00000544231 TOPAZ1Q8N9V7 1692 aa20.29■□□□□ 0.84
SSPN-208ENST00000544231 PLEKHG3A1L390 1219 aa20.28■□□□□ 0.84
SSPN-208ENST00000544231 KIF7Q2M1P5 1343 aa20.27■□□□□ 0.84
SSPN-208ENST00000544231 CCDC7Q96M83 1385 aa20.27■□□□□ 0.84
SSPN-208ENST00000544231 NGDNQ8NEJ9 315 aaKnown RBP20.27■□□□□ 0.84
SSPN-208ENST00000544231 CABP1Q9NZU7 370 aa20.27■□□□□ 0.84
SSPN-208ENST00000544231 C11orf95C9JLR9 678 aaPredicted RBP20.26■□□□□ 0.83
SSPN-208ENST00000544231 PMFBP1Q8TBY8 1022 aa20.26■□□□□ 0.83
SSPN-208ENST00000544231 RGPD8O14715 1765 aaPredicted RBP20.26■□□□□ 0.83
SSPN-208ENST00000544231 NPHP3Q7Z494 1330 aa20.26■□□□□ 0.83
SSPN-208ENST00000544231 ROBO1Q9Y6N7 1651 aa20.26■□□□□ 0.83
SSPN-208ENST00000544231 TERF2IPQ9NYB0 399 aa20.25■□□□□ 0.83
SSPN-208ENST00000544231 HDGFL2Q7Z4V5 671 aaPredicted RBP20.24■□□□□ 0.83
SSPN-208ENST00000544231 WASHC2AQ641Q2 1341 aa20.24■□□□□ 0.83
SSPN-208ENST00000544231 POLR3AO14802 1390 aaPredicted RBP20.23■□□□□ 0.83
SSPN-208ENST00000544231 ZNF692Q9BU19 519 aaPredicted RBP20.23■□□□□ 0.83
SSPN-208ENST00000544231 SLC12A5Q9H2X9 1139 aa20.23■□□□□ 0.83
SSPN-208ENST00000544231 ACEP12821 1306 aa20.23■□□□□ 0.83
SSPN-208ENST00000544231 ZNF316A6NFI3 1004 aaPredicted RBP20.22■□□□□ 0.83
SSPN-208ENST00000544231 FOXO3O43524 673 aa20.22■□□□□ 0.83
SSPN-208ENST00000544231 PSME1Q06323 249 aa20.22■□□□□ 0.83
SSPN-208ENST00000544231 FBXO41Q8TF61 875 aa20.21■□□□□ 0.83
SSPN-208ENST00000544231 BRD4O60885 1362 aaPredicted RBP20.2■□□□□ 0.82
SSPN-208ENST00000544231 AHDC1Q5TGY3 1603 aaPredicted RBP20.2■□□□□ 0.82
SSPN-208ENST00000544231 ANKRD36BQ8N2N9 1353 aa20.2■□□□□ 0.82
SSPN-208ENST00000544231 NHSL1Q5SYE7 1610 aa20.18■□□□□ 0.82
SSPN-208ENST00000544231 MYOM1P52179 1685 aa20.18■□□□□ 0.82
SSPN-208ENST00000544231 KTN1Q86UP2 1357 aaKnown RBP20.18■□□□□ 0.82
SSPN-208ENST00000544231 CPSF1Q10570 1443 aaKnown RBP20.18■□□□□ 0.82
SSPN-208ENST00000544231 KRT28Q7Z3Y7 464 aa20.17■□□□□ 0.82
SSPN-208ENST00000544231 A0A1W2PP64 1363 aa20.17■□□□□ 0.82
SSPN-208ENST00000544231 SOS2Q07890 1332 aaPredicted RBP20.16■□□□□ 0.82
SSPN-208ENST00000544231 USP6P35125 1406 aa20.16■□□□□ 0.82
SSPN-208ENST00000544231 CD163L1Q9NR16 1453 aa20.15■□□□□ 0.82
SSPN-208ENST00000544231 PXDNQ92626 1479 aa20.14■□□□□ 0.81
SSPN-208ENST00000544231 SBNO1A3KN83 1393 aa20.14■□□□□ 0.81
SSPN-208ENST00000544231 DDX17Q92841 729 aaKnown RBP20.14■□□□□ 0.81
SSPN-208ENST00000544231 AKAP12Q02952 1782 aa20.13■□□□□ 0.81
SSPN-208ENST00000544231 EDC4Q6P2E9 1401 aaKnown RBP20.13■□□□□ 0.81
SSPN-208ENST00000544231 XPCQ01831 940 aaPredicted RBP20.13■□□□□ 0.81
SSPN-208ENST00000544231 PANK3Q9H999 370 aa20.13■□□□□ 0.81
SSPN-208ENST00000544231 PHLPP1O60346 1717 aa20.13■□□□□ 0.81
SSPN-208ENST00000544231 PAK3O75914 559 aaPredicted RBP20.12■□□□□ 0.81
SSPN-208ENST00000544231 LRRC59Q96AG4 307 aaKnown RBP20.12■□□□□ 0.81
SSPN-208ENST00000544231 MON2Q7Z3U7 1717 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms