RNA–Protein interactions for RNA: ENST00000543341.6

GTF2H3-212, Transcript of general transcription factor IIH subunit 3, human

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2H3, Length 3,329 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GTF2H3-212	ENST00000543341	MST1R	Q04912	1400 aa		10.36	□□□□□ -0.75
GTF2H3-212	ENST00000543341	ROCK2	O75116	1388 aa	Known RBP	10.36	□□□□□ -0.75
GTF2H3-212	ENST00000543341	KIF20B	Q96Q89	1820 aa		10.36	□□□□□ -0.75
GTF2H3-212	ENST00000543341	CD163L1	Q9NR16	1453 aa		10.35	□□□□□ -0.75
GTF2H3-212	ENST00000543341	NBPF1	Q3BBV0	1214 aa		10.35	□□□□□ -0.75
GTF2H3-212	ENST00000543341	PHRF1	Q9P1Y6	1649 aa	Known RBP	10.34	□□□□□ -0.75
GTF2H3-212	ENST00000543341	ATP7B	P35670	1465 aa		10.34	□□□□□ -0.75
GTF2H3-212	ENST00000543341	ROBO2	Q9HCK4	1378 aa		10.34	□□□□□ -0.75
GTF2H3-212	ENST00000543341	HDGF	P51858	240 aa	Known RBP	10.33	□□□□□ -0.76
GTF2H3-212	ENST00000543341	ALS2	Q96Q42	1657 aa		10.33	□□□□□ -0.76
GTF2H3-212	ENST00000543341	EIF3A	Q14152	1382 aa	Known RBP	10.33	□□□□□ -0.76
GTF2H3-212	ENST00000543341	CFAP70	Q5T0N1	1121 aa		10.32	□□□□□ -0.76
GTF2H3-212	ENST00000543341	ANKAR	Q7Z5J8	1434 aa		10.32	□□□□□ -0.76
GTF2H3-212	ENST00000543341	ADGRL3	Q9HAR2	1447 aa		10.32	□□□□□ -0.76
GTF2H3-212	ENST00000543341	ABCA3	Q99758	1704 aa		10.31	□□□□□ -0.76
GTF2H3-212	ENST00000543341	ANKLE2	Q86XL3	938 aa		10.3	□□□□□ -0.76
GTF2H3-212	ENST00000543341	DISP3	Q9P2K9	1392 aa		10.3	□□□□□ -0.76
GTF2H3-212	ENST00000543341	RGL3	Q3MIN7	710 aa		10.3	□□□□□ -0.76
GTF2H3-212	ENST00000543341	COL22A1	Q8NFW1	1626 aa	Predicted RBP	10.29	□□□□□ -0.76
GTF2H3-212	ENST00000543341	TXNDC2	Q86VQ3	553 aa		10.29	□□□□□ -0.76
GTF2H3-212	ENST00000543341	MED1	Q15648	1581 aa	Predicted RBP	10.29	□□□□□ -0.76
GTF2H3-212	ENST00000543341	SSH2	Q76I76	1423 aa		10.29	□□□□□ -0.76
GTF2H3-212	ENST00000543341	PLEKHH1	Q9ULM0	1364 aa		10.28	□□□□□ -0.76
GTF2H3-212	ENST00000543341	NINL	Q9Y2I6	1382 aa		10.28	□□□□□ -0.76
GTF2H3-212	ENST00000543341	CPSF1	Q10570	1443 aa	Known RBP	10.28	□□□□□ -0.76
GTF2H3-212	ENST00000543341	BCAN	Q96GW7	911 aa		10.28	□□□□□ -0.76
GTF2H3-212	ENST00000543341	CCDC7	Q96M83	1385 aa		10.28	□□□□□ -0.76
GTF2H3-212	ENST00000543341	PIK3C2A	O00443	1686 aa		10.27	□□□□□ -0.76
GTF2H3-212	ENST00000543341	EID1	Q9Y6B2	187 aa		10.27	□□□□□ -0.76
GTF2H3-212	ENST00000543341	AHDC1	Q5TGY3	1603 aa	Predicted RBP	10.27	□□□□□ -0.77
GTF2H3-212	ENST00000543341	HSPA5	P11021	654 aa	Known RBP	10.27	□□□□□ -0.77
GTF2H3-212	ENST00000543341	NCKAP5L	Q9HCH0	1330 aa		10.26	□□□□□ -0.77
GTF2H3-212	ENST00000543341	KCNA6	P17658	529 aa		10.26	□□□□□ -0.77
GTF2H3-212	ENST00000543341	ZNF326	Q5BKZ1	582 aa	Known RBP	10.26	□□□□□ -0.77
GTF2H3-212	ENST00000543341	C11orf95	C9JLR9	678 aa	Predicted RBP	10.25	□□□□□ -0.77
GTF2H3-212	ENST00000543341	WASHC2A	Q641Q2	1341 aa		10.25	□□□□□ -0.77
GTF2H3-212	ENST00000543341	POLR3A	O14802	1390 aa	Predicted RBP	10.25	□□□□□ -0.77
GTF2H3-212	ENST00000543341	NEFL	P07196	543 aa		10.24	□□□□□ -0.77
GTF2H3-212	ENST00000543341	NPC1L1	Q9UHC9	1359 aa		10.24	□□□□□ -0.77
GTF2H3-212	ENST00000543341	EIF4G2	P78344	907 aa	Known RBP eCLIP	10.24	□□□□□ -0.77	4e-8	■■■■■ 34
GTF2H3-212	ENST00000543341	CARD11	Q9BXL7	1154 aa		10.24	□□□□□ -0.77
GTF2H3-212	ENST00000543341	SUPT16H	Q9Y5B9	1047 aa	Known RBP	10.24	□□□□□ -0.77
GTF2H3-212	ENST00000543341	CAMTA1	Q9Y6Y1	1673 aa		10.23	□□□□□ -0.77
GTF2H3-212	ENST00000543341	CENPJ	Q9HC77	1338 aa	Predicted RBP	10.23	□□□□□ -0.77
GTF2H3-212	ENST00000543341	ANP32E	Q9BTT0	268 aa		10.23	□□□□□ -0.77
GTF2H3-212	ENST00000543341	KDM2A	Q9Y2K7	1162 aa		10.23	□□□□□ -0.77
GTF2H3-212	ENST00000543341	KIF7	Q2M1P5	1343 aa		10.23	□□□□□ -0.77
GTF2H3-212	ENST00000543341	SHPRH	Q149N8	1683 aa		10.22	□□□□□ -0.77
GTF2H3-212	ENST00000543341	ABCC6	O95255	1503 aa		10.21	□□□□□ -0.77
GTF2H3-212	ENST00000543341	ST20-MTHFS	A0A0A6YYL1	179 aa		10.21	□□□□□ -0.77
GTF2H3-212	ENST00000543341	SLIT3	O75094	1523 aa		10.21	□□□□□ -0.77
GTF2H3-212	ENST00000543341	PXDN	Q92626	1479 aa		10.21	□□□□□ -0.78
GTF2H3-212	ENST00000543341	BRD4	O60885	1362 aa	Predicted RBP	10.21	□□□□□ -0.78
GTF2H3-212	ENST00000543341	TMEM132E	Q6IEE7	984 aa		10.2	□□□□□ -0.78
GTF2H3-212	ENST00000543341	RGPD1	P0DJD0	1748 aa		10.2	□□□□□ -0.78
GTF2H3-212	ENST00000543341	COL16A1	Q07092	1604 aa	Predicted RBP	10.2	□□□□□ -0.78
GTF2H3-212	ENST00000543341	ROBO1	Q9Y6N7	1651 aa		10.2	□□□□□ -0.78
GTF2H3-212	ENST00000543341	SMG6	Q86US8	1419 aa	Known RBP	10.2	□□□□□ -0.78
GTF2H3-212	ENST00000543341	ERICH6	Q7L0X2	663 aa		10.2	□□□□□ -0.78
GTF2H3-212	ENST00000543341	STAG3	Q9UJ98	1225 aa		10.2	□□□□□ -0.78
GTF2H3-212	ENST00000543341	CHGA	P10645	457 aa	Known RBP	10.19	□□□□□ -0.78
GTF2H3-212	ENST00000543341	NUTM2D	Q5VT03	806 aa	Predicted RBP	10.19	□□□□□ -0.78
GTF2H3-212	ENST00000543341	AMOTL2	Q9Y2J4	779 aa		10.19	□□□□□ -0.78
GTF2H3-212	ENST00000543341	LMO7	Q8WWI1	1683 aa		10.19	□□□□□ -0.78
GTF2H3-212	ENST00000543341	COL18A1	P39060	1754 aa		10.19	□□□□□ -0.78
GTF2H3-212	ENST00000543341	ATAD2	Q6PL18	1390 aa		10.19	□□□□□ -0.78
GTF2H3-212	ENST00000543341	DMRT2	Q9Y5R5	561 aa		10.18	□□□□□ -0.78
GTF2H3-212	ENST00000543341	C1orf167	Q5SNV9	1468 aa		10.18	□□□□□ -0.78
GTF2H3-212	ENST00000543341	ANKRD36B	Q8N2N9	1353 aa		10.18	□□□□□ -0.78
GTF2H3-212	ENST00000543341	PER1	O15534	1290 aa	Predicted RBP	10.17	□□□□□ -0.78
GTF2H3-212	ENST00000543341	DDX10	Q13206	875 aa	Known RBP	10.17	□□□□□ -0.78
GTF2H3-212	ENST00000543341	HIRIP3	Q9BW71	556 aa	Predicted RBP	10.17	□□□□□ -0.78
GTF2H3-212	ENST00000543341	PRR36	Q9H6K5	1346 aa		10.17	□□□□□ -0.78
GTF2H3-212	ENST00000543341	HSPA2	P54652	639 aa		10.17	□□□□□ -0.78
GTF2H3-212	ENST00000543341	NFAT5	O94916	1531 aa		10.17	□□□□□ -0.78
GTF2H3-212	ENST00000543341	PRAM1	Q96QH2	718 aa		10.17	□□□□□ -0.78
GTF2H3-212	ENST00000543341	BCL11A	Q9H165	835 aa		10.16	□□□□□ -0.78
GTF2H3-212	ENST00000543341	PEAK1	Q9H792	1746 aa		10.16	□□□□□ -0.78
GTF2H3-212	ENST00000543341	SLC26A8	Q96RN1	970 aa		10.16	□□□□□ -0.78
GTF2H3-212	ENST00000543341	TSHZ2	Q9NRE2	1034 aa		10.16	□□□□□ -0.78
GTF2H3-212	ENST00000543341	WNK3	Q9BYP7	1800 aa		10.15	□□□□□ -0.78
GTF2H3-212	ENST00000543341	PLEKHG3	A1L390	1219 aa		10.15	□□□□□ -0.78
GTF2H3-212	ENST00000543341	WASL	O00401	505 aa	Predicted RBP	10.15	□□□□□ -0.78
GTF2H3-212	ENST00000543341	LTN1	O94822	1766 aa		10.15	□□□□□ -0.78
GTF2H3-212	ENST00000543341	FKBP8	Q14318	412 aa		10.15	□□□□□ -0.79
GTF2H3-212	ENST00000543341	OVOS2	A0A0J9YW53	1432 aa		10.15	□□□□□ -0.79
GTF2H3-212	ENST00000543341	OVOS2	Q6IE36	1432 aa		10.15	□□□□□ -0.79
GTF2H3-212	ENST00000543341	TMEM94	Q12767	1356 aa		10.14	□□□□□ -0.79
GTF2H3-212	ENST00000543341	KTN1	Q86UP2	1357 aa	Known RBP	10.14	□□□□□ -0.79
GTF2H3-212	ENST00000543341	FAM208A	Q9UK61	1670 aa	Known RBP	10.14	□□□□□ -0.79
GTF2H3-212	ENST00000543341	EDC4	Q6P2E9	1401 aa	Known RBP	10.14	□□□□□ -0.79
GTF2H3-212	ENST00000543341	EVC2	Q86UK5	1308 aa		10.14	□□□□□ -0.79
GTF2H3-212	ENST00000543341	ADRA2B	P18089	450 aa		10.14	□□□□□ -0.79
GTF2H3-212	ENST00000543341	USP6	P35125	1406 aa		10.14	□□□□□ -0.79
GTF2H3-212	ENST00000543341	PARD3	Q8TEW0	1356 aa		10.14	□□□□□ -0.79
GTF2H3-212	ENST00000543341	PPIP5K1	Q6PFW1	1433 aa		10.14	□□□□□ -0.79
GTF2H3-212	ENST00000543341	TRAK1	Q9UPV9	953 aa		10.13	□□□□□ -0.79
GTF2H3-212	ENST00000543341	USP31	Q70CQ4	1352 aa		10.13	□□□□□ -0.79
GTF2H3-212	ENST00000543341	COL3A1	P02461	1466 aa	Predicted RBP	10.13	□□□□□ -0.79
GTF2H3-212	ENST00000543341	NSD2	O96028	1365 aa		10.13	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms