RNA–Protein interactions for RNA: ENST00000543264.6

SHD-201, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHD, Length 2,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-201ENST00000543264 NAP1L5Q96NT1 182 aaPredicted RBP30.07■■■□□ 2.4
SHD-201ENST00000543264 WDR63Q8IWG1 891 aa30.06■■■□□ 2.4
SHD-201ENST00000543264 CLTCL1P53675 1640 aa30.06■■■□□ 2.4
SHD-201ENST00000543264 PNNQ9H307 717 aaKnown RBP30.06■■■□□ 2.4
SHD-201ENST00000543264 EFCAB2Q5VUJ9 269 aa30.05■■■□□ 2.4
SHD-201ENST00000543264 MVPQ14764 893 aaKnown RBP30.03■■■□□ 2.4
SHD-201ENST00000543264 PTPRTO14522 1441 aa30.03■■■□□ 2.4
SHD-201ENST00000543264 PHF23Q9BUL5 403 aaPredicted RBP30.02■■■□□ 2.4
SHD-201ENST00000543264 TRAPPC8Q9Y2L5 1435 aa30.02■■■□□ 2.4
SHD-201ENST00000543264 ADGRF5Q8IZF2 1346 aa30.01■■■□□ 2.4
SHD-201ENST00000543264 FTSJ3Q8IY81 847 aaKnown RBP30.01■■■□□ 2.39
SHD-201ENST00000543264 CLCN1P35523 988 aa30■■■□□ 2.39
SHD-201ENST00000543264 SPAG9O60271 1321 aaKnown RBP29.99■■■□□ 2.39
SHD-201ENST00000543264 NSD3Q9BZ95 1437 aa29.98■■■□□ 2.39
SHD-201ENST00000543264 ZKSCAN2Q63HK3 967 aa29.98■■■□□ 2.39
SHD-201ENST00000543264 AFAP1Q8N556 730 aa29.98■■■□□ 2.39
SHD-201ENST00000543264 MRE11P49959 708 aa29.97■■■□□ 2.39
SHD-201ENST00000543264 DZIP1LQ8IYY4 767 aaKnown RBP29.97■■■□□ 2.39
SHD-201ENST00000543264 MTHFSP49914 203 aa29.97■■■□□ 2.39
SHD-201ENST00000543264 SLC12A5Q9H2X9 1139 aa29.97■■■□□ 2.39
SHD-201ENST00000543264 MYH16Q9H6N6 1097 aa29.97■■■□□ 2.39
SHD-201ENST00000543264 SHPRHQ149N8 1683 aa29.96■■■□□ 2.39
SHD-201ENST00000543264 PLCH2O75038 1416 aa29.95■■■□□ 2.39
SHD-201ENST00000543264 HSCBQ8IWL3 235 aa29.95■■■□□ 2.38
SHD-201ENST00000543264 RTEL1-TNFRSF6BF6WH68 1400 aa29.94■■■□□ 2.38
SHD-201ENST00000543264 KIAA1210Q9ULL0 1709 aa29.94■■■□□ 2.38
SHD-201ENST00000543264 IQSEC2Q5JU85 1478 aa29.93■■■□□ 2.38
SHD-201ENST00000543264 CCDC27Q2M243 656 aa29.93■■■□□ 2.38
SHD-201ENST00000543264 GRPEL1Q9HAV7 217 aa29.92■■■□□ 2.38
SHD-201ENST00000543264 CFAP53Q96M91 514 aa29.9■■■□□ 2.38
SHD-201ENST00000543264 DDX11L8A8MPP1 907 aa29.9■■■□□ 2.38
SHD-201ENST00000543264 TSR2Q969E8 191 aaKnown RBP29.9■■■□□ 2.38
SHD-201ENST00000543264 U2AF1L5P0DN76 240 aaPredicted RBP29.88■■■□□ 2.37
SHD-201ENST00000543264 U2AF1Q01081 240 aaKnown RBP eCLIP29.88■■■□□ 2.37
SHD-201ENST00000543264 SMC4Q9NTJ3 1288 aa29.88■■■□□ 2.37
SHD-201ENST00000543264 ABCA6Q8N139 1617 aa29.88■■■□□ 2.37
SHD-201ENST00000543264 ZNF692Q9BU19 519 aaPredicted RBP29.88■■■□□ 2.37
SHD-201ENST00000543264 TRAK1Q9UPV9 953 aa29.88■■■□□ 2.37
SHD-201ENST00000543264 ITPRIPQ8IWB1 547 aa29.87■■■□□ 2.37
SHD-201ENST00000543264 KANK1Q14678 1352 aa29.87■■■□□ 2.37
SHD-201ENST00000543264 MAP3K4Q9Y6R4 1608 aa29.87■■■□□ 2.37
SHD-201ENST00000543264 ABCC1P33527 1531 aa29.86■■■□□ 2.37
SHD-201ENST00000543264 KIF3BO15066 747 aa29.86■■■□□ 2.37
SHD-201ENST00000543264 HSP90AA1P07900 732 aaKnown RBP29.85■■■□□ 2.37
SHD-201ENST00000543264 TRIM27P14373 513 aa29.85■■■□□ 2.37
SHD-201ENST00000543264 HDAC1Q13547 482 aaPredicted RBP29.85■■■□□ 2.37
SHD-201ENST00000543264 UGGT1Q9NYU2 1555 aa29.85■■■□□ 2.37
SHD-201ENST00000543264 EXOSC9Q06265 439 aaKnown RBP29.83■■■□□ 2.37
SHD-201ENST00000543264 GLIPR1L2Q4G1C9 344 aa29.83■■■□□ 2.37
SHD-201ENST00000543264 TET3O43151 1660 aa29.82■■■□□ 2.36
SHD-201ENST00000543264 ESPNB1AK53 854 aa29.82■■■□□ 2.36
SHD-201ENST00000543264 DDX19BQ9UMR2 479 aa29.82■■■□□ 2.36
SHD-201ENST00000543264 ZNF518AQ6AHZ1 1483 aa29.82■■■□□ 2.36
SHD-201ENST00000543264 HSP90AA2PQ14568 343 aaPredicted RBP29.81■■■□□ 2.36
SHD-201ENST00000543264 SBNO2Q9Y2G9 1366 aa29.81■■■□□ 2.36
SHD-201ENST00000543264 SHROOM2Q13796 1616 aa29.81■■■□□ 2.36
SHD-201ENST00000543264 SSH1Q8WYL5 1049 aa29.8■■■□□ 2.36
SHD-201ENST00000543264 MYOM2P54296 1465 aa29.8■■■□□ 2.36
SHD-201ENST00000543264 TNPO1Q92973 898 aaKnown RBP29.8■■■□□ 2.36
SHD-201ENST00000543264 CHGAP10645 457 aaKnown RBP29.79■■■□□ 2.36
SHD-201ENST00000543264 SMC5Q8IY18 1101 aa29.79■■■□□ 2.36
SHD-201ENST00000543264 ERBB4Q15303 1308 aa29.78■■■□□ 2.36
SHD-201ENST00000543264 DDIT3P35638 169 aa29.77■■■□□ 2.36
SHD-201ENST00000543264 ATF7IPQ6VMQ6 1270 aa29.77■■■□□ 2.36
SHD-201ENST00000543264 NOB1Q9ULX3 412 aaKnown RBP29.77■■■□□ 2.36
SHD-201ENST00000543264 TRIM44Q96DX7 344 aaPredicted RBP29.77■■■□□ 2.36
SHD-201ENST00000543264 HSP90AB1P08238 724 aaKnown RBP29.76■■■□□ 2.36
SHD-201ENST00000543264 CT47B1P0C2W7 299 aaPredicted RBP29.76■■■□□ 2.36
SHD-201ENST00000543264 GAS2L3Q86XJ1 694 aa29.76■■■□□ 2.36
SHD-201ENST00000543264 ISY1Q9ULR0 285 aaKnown RBP29.76■■■□□ 2.36
SHD-201ENST00000543264 RBM25P49756 843 aaKnown RBP29.75■■■□□ 2.35
SHD-201ENST00000543264 TMEM57Q8N5G2 664 aa29.75■■■□□ 2.35
SHD-201ENST00000543264 ZFYVE16Q7Z3T8 1539 aa29.74■■■□□ 2.35
SHD-201ENST00000543264 DEPDC5O75140 1603 aa29.74■■■□□ 2.35
SHD-201ENST00000543264 SNX21Q969T3 373 aa29.74■■■□□ 2.35
SHD-201ENST00000543264 LNPKQ9C0E8 428 aa29.74■■■□□ 2.35
SHD-201ENST00000543264 TMEM132EQ6IEE7 984 aa29.73■■■□□ 2.35
SHD-201ENST00000543264 NCOA3Q9Y6Q9 1424 aa29.73■■■□□ 2.35
SHD-201ENST00000543264 GBP4Q96PP9 640 aa29.72■■■□□ 2.35
SHD-201ENST00000543264 U2SURPO15042 1029 aaKnown RBP29.72■■■□□ 2.35
SHD-201ENST00000543264 NCBP3Q53F19 620 aaKnown RBP29.72■■■□□ 2.35
SHD-201ENST00000543264 FOXD4L1Q9NU39 408 aa29.72■■■□□ 2.35
SHD-201ENST00000543264 MYO3AQ8NEV4 1616 aa29.72■■■□□ 2.35
SHD-201ENST00000543264 RRP9O43818 475 aaKnown RBP29.71■■■□□ 2.35
SHD-201ENST00000543264 NOS1P29475 1434 aa29.7■■■□□ 2.35
SHD-201ENST00000543264 ZBTB40Q9NUA8 1239 aa29.7■■■□□ 2.35
SHD-201ENST00000543264 ERCC6L2Q5T890 1561 aa29.7■■■□□ 2.35
SHD-201ENST00000543264 KIF1BO60333 1816 aa29.7■■■□□ 2.35
SHD-201ENST00000543264 VSIG10Q8N0Z9 540 aa29.7■■■□□ 2.34
SHD-201ENST00000543264 NUCB1Q02818 461 aa29.69■■■□□ 2.34
SHD-201ENST00000543264 NEURL4Q96JN8 1562 aa29.69■■■□□ 2.34
SHD-201ENST00000543264 TMPOP42166 694 aaKnown RBP29.68■■■□□ 2.34
SHD-201ENST00000543264 RAB3GAP1Q15042 981 aa29.68■■■□□ 2.34
SHD-201ENST00000543264 CIZ1Q9ULV3 898 aaPredicted RBP29.68■■■□□ 2.34
SHD-201ENST00000543264 TRIM35Q9UPQ4 493 aa29.67■■■□□ 2.34
SHD-201ENST00000543264 SKOR2Q2VWA4 1001 aaPredicted RBP29.66■■■□□ 2.34
SHD-201ENST00000543264 VWDEQ8N2E2 1590 aa29.66■■■□□ 2.34
SHD-201ENST00000543264 CHD1LQ86WJ1 897 aa29.65■■■□□ 2.34
SHD-201ENST00000543264 NRXN1Q9ULB1 1477 aa29.64■■■□□ 2.33
SHD-201ENST00000543264 PLEKHF1Q96S99 279 aa29.63■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms