RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 NOL10Q9BSC4 688 aaKnown RBP15.84■□□□□ 0.13
TNC-212ENST00000542877 PDE3AQ14432 1141 aa15.84■□□□□ 0.13
TNC-212ENST00000542877 NAT10Q9H0A0 1025 aaKnown RBP15.84■□□□□ 0.13
TNC-212ENST00000542877 NINLQ9Y2I6 1382 aa15.83■□□□□ 0.13
TNC-212ENST00000542877 FYCO1Q9BQS8 1478 aa15.83■□□□□ 0.13
TNC-212ENST00000542877 MCM2P49736 904 aa15.83■□□□□ 0.12
TNC-212ENST00000542877 SAFBQ15424 915 aaKnown RBP eCLIP15.83■□□□□ 0.12
TNC-212ENST00000542877 ACBD3Q9H3P7 528 aa15.83■□□□□ 0.12
TNC-212ENST00000542877 PSMA5P28066 241 aa15.83■□□□□ 0.12
TNC-212ENST00000542877 NFXL1Q6ZNB6 911 aa15.83■□□□□ 0.12
TNC-212ENST00000542877 R3HCC1Q9Y3T6 440 aaKnown RBP15.82■□□□□ 0.12
TNC-212ENST00000542877 ERICH2A1L162 156 aa15.82■□□□□ 0.12
TNC-212ENST00000542877 TCP11L2Q8N4U5 519 aa15.82■□□□□ 0.12
TNC-212ENST00000542877 CDCA7LQ96GN5 454 aa15.82■□□□□ 0.12
TNC-212ENST00000542877 HMOX1P09601 288 aa15.81■□□□□ 0.12
TNC-212ENST00000542877 UBTFL1P0CB47 393 aaPredicted RBP15.81■□□□□ 0.12
TNC-212ENST00000542877 RABEP1Q15276 862 aa15.81■□□□□ 0.12
TNC-212ENST00000542877 ZNF644Q9H582 1327 aaPredicted RBP15.81■□□□□ 0.12
TNC-212ENST00000542877 PDZRN3Q9UPQ7 1066 aa15.81■□□□□ 0.12
TNC-212ENST00000542877 CASKIN1Q8WXD9 1431 aa15.81■□□□□ 0.12
TNC-212ENST00000542877 PPP2R1AP30153 589 aa15.81■□□□□ 0.12
TNC-212ENST00000542877 GAPVD1Q14C86 1478 aa15.8■□□□□ 0.12
TNC-212ENST00000542877 CNTROBQ8N137 903 aa15.8■□□□□ 0.12
TNC-212ENST00000542877 GGNBP2Q9H3C7 697 aa15.8■□□□□ 0.12
TNC-212ENST00000542877 FGD5Q6ZNL6 1462 aa15.8■□□□□ 0.12
TNC-212ENST00000542877 NCOA2Q15596 1464 aa15.8■□□□□ 0.12
TNC-212ENST00000542877 GNAI3P08754 354 aa15.8■□□□□ 0.12
TNC-212ENST00000542877 RALYLQ86SE5 291 aaKnown RBP15.8■□□□□ 0.12
TNC-212ENST00000542877 GCC1Q96CN9 775 aa15.8■□□□□ 0.12
TNC-212ENST00000542877 MTHFSP49914 203 aa15.79■□□□□ 0.12
TNC-212ENST00000542877 EVA1CP58658 441 aa15.79■□□□□ 0.12
TNC-212ENST00000542877 CCDC173Q0VFZ6 552 aa15.79■□□□□ 0.12
TNC-212ENST00000542877 CAVIN1Q6NZI2 390 aaKnown RBP15.79■□□□□ 0.12
TNC-212ENST00000542877 RRBP1Q9P2E9 1410 aaKnown RBP15.79■□□□□ 0.12
TNC-212ENST00000542877 OLFM4Q6UX06 510 aa15.78■□□□□ 0.12
TNC-212ENST00000542877 RNF214Q8ND24 703 aa15.78■□□□□ 0.12
TNC-212ENST00000542877 AK7Q96M32 723 aa15.78■□□□□ 0.12
TNC-212ENST00000542877 BACH2Q9BYV9 841 aa15.78■□□□□ 0.12
TNC-212ENST00000542877 PRM3Q9NNZ6 103 aa15.78■□□□□ 0.12
TNC-212ENST00000542877 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.77■□□□□ 0.12
TNC-212ENST00000542877 HSP90B2PQ58FF3 399 aa15.77■□□□□ 0.12
TNC-212ENST00000542877 RUFY1Q96T51 708 aa15.77■□□□□ 0.12
TNC-212ENST00000542877 SDF4Q9BRK5 362 aa15.77■□□□□ 0.12
TNC-212ENST00000542877 TSPY26PQ9H489 355 aa15.77■□□□□ 0.12
TNC-212ENST00000542877 CDR1P51861 262 aa15.77■□□□□ 0.12
TNC-212ENST00000542877 SCAPERQ9BY12 1400 aa15.77■□□□□ 0.12
TNC-212ENST00000542877 PDCP20941 246 aa15.77■□□□□ 0.11
TNC-212ENST00000542877 FBXW7Q969H0 707 aa15.77■□□□□ 0.11
TNC-212ENST00000542877 CLASRPQ8N2M8 674 aaKnown RBP15.76■□□□□ 0.11
TNC-212ENST00000542877 NEK4P51957 841 aa15.76■□□□□ 0.11
TNC-212ENST00000542877 PSME1Q06323 249 aa15.76■□□□□ 0.11
TNC-212ENST00000542877 RIC3Q7Z5B4 369 aa15.76■□□□□ 0.11
TNC-212ENST00000542877 VPS37DQ86XT2 251 aa15.76■□□□□ 0.11
TNC-212ENST00000542877 HMGN5P82970 282 aaKnown RBP15.76■□□□□ 0.11
TNC-212ENST00000542877 NOM1Q5C9Z4 860 aaKnown RBP15.76■□□□□ 0.11
TNC-212ENST00000542877 CABP2Q9NPB3 220 aa15.75■□□□□ 0.11
TNC-212ENST00000542877 EXOSC9Q06265 439 aaKnown RBP15.75■□□□□ 0.11
TNC-212ENST00000542877 TRIM5Q9C035 493 aa15.75■□□□□ 0.11
TNC-212ENST00000542877 CWC22Q9HCG8 908 aaKnown RBP15.75■□□□□ 0.11
TNC-212ENST00000542877 HIP1O00291 1037 aa15.75■□□□□ 0.11
TNC-212ENST00000542877 PRPF40AO75400 957 aaKnown RBP15.75■□□□□ 0.11
TNC-212ENST00000542877 FOSBP53539 338 aa15.75■□□□□ 0.11
TNC-212ENST00000542877 DHX16O60231 1041 aaKnown RBP15.74■□□□□ 0.11
TNC-212ENST00000542877 CCDC30Q5VVM6 783 aa15.74■□□□□ 0.11
TNC-212ENST00000542877 NEUROD6Q96NK8 337 aa15.74■□□□□ 0.11
TNC-212ENST00000542877 SMG6Q86US8 1419 aaKnown RBP15.74■□□□□ 0.11
TNC-212ENST00000542877 TCEAL9Q9UHQ7 104 aa15.74■□□□□ 0.11
TNC-212ENST00000542877 CT47B1P0C2W7 299 aaPredicted RBP15.74■□□□□ 0.11
TNC-212ENST00000542877 FSD1Q9BTV5 496 aa15.74■□□□□ 0.11
TNC-212ENST00000542877 TRIM34Q9BYJ4 488 aa15.74■□□□□ 0.11
TNC-212ENST00000542877 BRPF3Q9ULD4 1205 aa15.74■□□□□ 0.11
TNC-212ENST00000542877 WASHC4Q2M389 1173 aa15.73■□□□□ 0.11
TNC-212ENST00000542877 BRMS1Q9HCU9 246 aa15.73■□□□□ 0.11
TNC-212ENST00000542877 XBP1P17861 261 aa15.73■□□□□ 0.11
TNC-212ENST00000542877 CCP110O43303 1012 aa15.72■□□□□ 0.11
TNC-212ENST00000542877 SURF6O75683 361 aaKnown RBP15.72■□□□□ 0.11
TNC-212ENST00000542877 RAPGEF4Q8WZA2 1011 aa15.72■□□□□ 0.11
TNC-212ENST00000542877 AKNAQ7Z591 1439 aa15.72■□□□□ 0.11
TNC-212ENST00000542877 KINO60870 393 aaKnown RBP15.72■□□□□ 0.11
TNC-212ENST00000542877 HFM1A2PYH4 1435 aa15.72■□□□□ 0.11
TNC-212ENST00000542877 GAS2L2Q8NHY3 880 aa15.72■□□□□ 0.11
TNC-212ENST00000542877 PNISRQ8TF01 805 aaKnown RBP15.72■□□□□ 0.11
TNC-212ENST00000542877 ERCC4Q92889 916 aaPredicted RBP15.72■□□□□ 0.11
TNC-212ENST00000542877 TWISTNBQ3B726 338 aaPredicted RBP15.71■□□□□ 0.11
TNC-212ENST00000542877 ERICH3Q5RHP9 1530 aa15.71■□□□□ 0.11
TNC-212ENST00000542877 NAP1L1P55209 391 aaKnown RBP15.71■□□□□ 0.1
TNC-212ENST00000542877 CCDC27Q2M243 656 aa15.71■□□□□ 0.1
TNC-212ENST00000542877 PDILTQ8N807 584 aa15.71■□□□□ 0.1
TNC-212ENST00000542877 RAD21O60216 631 aa15.7■□□□□ 0.1
TNC-212ENST00000542877 PRKAR2BP31323 418 aa15.7■□□□□ 0.1
TNC-212ENST00000542877 WDR63Q8IWG1 891 aa15.7■□□□□ 0.1
TNC-212ENST00000542877 WWC1Q8IX03 1113 aa15.7■□□□□ 0.1
TNC-212ENST00000542877 AIMP1Q12904 312 aaKnown RBP15.7■□□□□ 0.1
TNC-212ENST00000542877 ERC1Q8IUD2 1116 aa15.7■□□□□ 0.1
TNC-212ENST00000542877 DHX8Q14562 1220 aaKnown RBP15.69■□□□□ 0.1
TNC-212ENST00000542877 NOB1Q9ULX3 412 aaKnown RBP15.69■□□□□ 0.1
TNC-212ENST00000542877 RAD54L2Q9Y4B4 1467 aa15.69■□□□□ 0.1
TNC-212ENST00000542877 GNAI2P04899 355 aa15.69■□□□□ 0.1
TNC-212ENST00000542877 CWC15Q9P013 229 aaKnown RBP15.69■□□□□ 0.1
TNC-212ENST00000542877 PATL2C9JE40 543 aaKnown RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms