RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-223ENST00000542838 TNNQ9UQP3 1299 aa16.55■□□□□ 0.24
DDX11-223ENST00000542838 IFT172Q9UG01 1749 aa16.55■□□□□ 0.24
DDX11-223ENST00000542838 INO80Q9ULG1 1556 aaPredicted RBP16.54■□□□□ 0.24
DDX11-223ENST00000542838 SBNO2Q9Y2G9 1366 aa16.54■□□□□ 0.24
DDX11-223ENST00000542838 AAMPQ13685 434 aa16.54■□□□□ 0.24
DDX11-223ENST00000542838 PCDHB15Q9Y5E8 787 aa16.54■□□□□ 0.24
DDX11-223ENST00000542838 NLRP1Q9C000 1473 aa16.54■□□□□ 0.24
DDX11-223ENST00000542838 RLBP1P12271 317 aa16.54■□□□□ 0.24
DDX11-223ENST00000542838 BCL2L13Q9BXK5 485 aa16.54■□□□□ 0.24
DDX11-223ENST00000542838 UPF2Q9HAU5 1272 aaKnown RBP16.54■□□□□ 0.24
DDX11-223ENST00000542838 MROH2AA6NES4 1674 aa16.53■□□□□ 0.24
DDX11-223ENST00000542838 WDR63Q8IWG1 891 aa16.53■□□□□ 0.24
DDX11-223ENST00000542838 SLC12A5Q9H2X9 1139 aa16.53■□□□□ 0.24
DDX11-223ENST00000542838 PDZRN3Q9UPQ7 1066 aa16.53■□□□□ 0.24
DDX11-223ENST00000542838 TRAK1Q9UPV9 953 aa16.52■□□□□ 0.24
DDX11-223ENST00000542838 IQSEC2Q5JU85 1478 aa16.52■□□□□ 0.24
DDX11-223ENST00000542838 CHGAP10645 457 aaKnown RBP16.51■□□□□ 0.23
DDX11-223ENST00000542838 POGKQ9P215 609 aa16.51■□□□□ 0.23
DDX11-223ENST00000542838 MROH1Q8NDA8 1641 aa16.51■□□□□ 0.23
DDX11-223ENST00000542838 FANCAO15360 1455 aa16.51■□□□□ 0.23
DDX11-223ENST00000542838 PHF23Q9BUL5 403 aaPredicted RBP16.51■□□□□ 0.23
DDX11-223ENST00000542838 NOS1P29475 1434 aa16.51■□□□□ 0.23
DDX11-223ENST00000542838 RWDD1Q9H446 243 aaPredicted RBP16.5■□□□□ 0.23
DDX11-223ENST00000542838 NRXN1Q9ULB1 1477 aa16.5■□□□□ 0.23
DDX11-223ENST00000542838 MTHFSP49914 203 aa16.5■□□□□ 0.23
DDX11-223ENST00000542838 EFCAB6Q5THR3 1501 aa16.49■□□□□ 0.23
DDX11-223ENST00000542838 TBC1D32Q96NH3 1257 aa16.49■□□□□ 0.23
DDX11-223ENST00000542838 CFAP53Q96M91 514 aa16.49■□□□□ 0.23
DDX11-223ENST00000542838 ZMYM3Q14202 1370 aa16.48■□□□□ 0.23
DDX11-223ENST00000542838 QRICH2Q9H0J4 1663 aa16.48■□□□□ 0.23
DDX11-223ENST00000542838 ABCA9Q8IUA7 1624 aa16.48■□□□□ 0.23
DDX11-223ENST00000542838 CCDC27Q2M243 656 aa16.48■□□□□ 0.23
DDX11-223ENST00000542838 SETBP1Q9Y6X0 1596 aa16.48■□□□□ 0.23
DDX11-223ENST00000542838 PRKCSHP14314 528 aaPredicted RBP16.47■□□□□ 0.23
DDX11-223ENST00000542838 ANTXR1Q9H6X2 564 aa16.47■□□□□ 0.23
DDX11-223ENST00000542838 MYH16Q9H6N6 1097 aa16.47■□□□□ 0.23
DDX11-223ENST00000542838 ADGRL1O94910 1474 aa16.47■□□□□ 0.23
DDX11-223ENST00000542838 ZNF518AQ6AHZ1 1483 aa16.47■□□□□ 0.23
DDX11-223ENST00000542838 ZC3H13Q5T200 1668 aaKnown RBP16.47■□□□□ 0.23
DDX11-223ENST00000542838 PPRC1Q5VV67 1664 aaKnown RBP16.47■□□□□ 0.23
DDX11-223ENST00000542838 TBC1D2Q9BYX2 928 aa16.47■□□□□ 0.23
DDX11-223ENST00000542838 MVPQ14764 893 aaKnown RBP16.45■□□□□ 0.22
DDX11-223ENST00000542838 FAM43AQ8N2R8 423 aa16.45■□□□□ 0.22
DDX11-223ENST00000542838 TMEM132EQ6IEE7 984 aa16.45■□□□□ 0.22
DDX11-223ENST00000542838 C14orf93Q9H972 538 aaKnown RBP16.44■□□□□ 0.22
DDX11-223ENST00000542838 ADGRB3O60242 1522 aa16.44■□□□□ 0.22
DDX11-223ENST00000542838 U2AF1L5P0DN76 240 aaPredicted RBP16.44■□□□□ 0.22
DDX11-223ENST00000542838 U2AF1Q01081 240 aaKnown RBP eCLIP16.44■□□□□ 0.22
DDX11-223ENST00000542838 FTSJ3Q8IY81 847 aaKnown RBP16.44■□□□□ 0.22
DDX11-223ENST00000542838 ZKSCAN2Q63HK3 967 aa16.44■□□□□ 0.22
DDX11-223ENST00000542838 USP32Q8NFA0 1604 aa16.44■□□□□ 0.22
DDX11-223ENST00000542838 CFAP65Q6ZU64 1925 aaKnown RBP16.43■□□□□ 0.22
DDX11-223ENST00000542838 DZIP1LQ8IYY4 767 aaKnown RBP16.42■□□□□ 0.22
DDX11-223ENST00000542838 L1TD1Q5T7N2 865 aaKnown RBP16.42■□□□□ 0.22
DDX11-223ENST00000542838 SPRYD3Q8NCJ5 442 aa16.42■□□□□ 0.22
DDX11-223ENST00000542838 PPLO60437 1756 aa16.41■□□□□ 0.22
DDX11-223ENST00000542838 ADGRB1O14514 1584 aa16.4■□□□□ 0.22
DDX11-223ENST00000542838 LMTK2Q8IWU2 1503 aa16.4■□□□□ 0.22
DDX11-223ENST00000542838 NCBP3Q53F19 620 aaKnown RBP16.4■□□□□ 0.22
DDX11-223ENST00000542838 TSR2Q969E8 191 aaKnown RBP16.4■□□□□ 0.22
DDX11-223ENST00000542838 KIDINS220Q9ULH0 1771 aa16.4■□□□□ 0.22
DDX11-223ENST00000542838 SMC4Q9NTJ3 1288 aa16.39■□□□□ 0.21
DDX11-223ENST00000542838 MFAP1P55081 439 aaKnown RBP16.38■□□□□ 0.21
DDX11-223ENST00000542838 C22orf23Q9BZE7 217 aa16.38■□□□□ 0.21
DDX11-223ENST00000542838 EVC2Q86UK5 1308 aa16.38■□□□□ 0.21
DDX11-223ENST00000542838 EIF5BO60841 1220 aaKnown RBP16.38■□□□□ 0.21
DDX11-223ENST00000542838 CT47B1P0C2W7 299 aaPredicted RBP16.37■□□□□ 0.21
DDX11-223ENST00000542838 EXOSC9Q06265 439 aaKnown RBP16.37■□□□□ 0.21
DDX11-223ENST00000542838 ADGRB2O60241 1585 aa16.37■□□□□ 0.21
DDX11-223ENST00000542838 NSD2O96028 1365 aa16.37■□□□□ 0.21
DDX11-223ENST00000542838 ANKRD36BQ8N2N9 1353 aa16.37■□□□□ 0.21
DDX11-223ENST00000542838 ITPRIPQ8IWB1 547 aa16.36■□□□□ 0.21
DDX11-223ENST00000542838 U2SURPO15042 1029 aaKnown RBP16.36■□□□□ 0.21
DDX11-223ENST00000542838 ARXQ96QS3 562 aa16.36■□□□□ 0.21
DDX11-223ENST00000542838 NPATQ14207 1427 aa16.36■□□□□ 0.21
DDX11-223ENST00000542838 TRIM27P14373 513 aa16.35■□□□□ 0.21
DDX11-223ENST00000542838 MCM4P33991 863 aa16.35■□□□□ 0.21
DDX11-223ENST00000542838 GGT6Q6P531 493 aa16.35■□□□□ 0.21
DDX11-223ENST00000542838 DDX19BQ9UMR2 479 aa16.35■□□□□ 0.21
DDX11-223ENST00000542838 RPGRIP1LQ68CZ1 1315 aa16.35■□□□□ 0.21
DDX11-223ENST00000542838 HDAC1Q13547 482 aaPredicted RBP16.34■□□□□ 0.21
DDX11-223ENST00000542838 PUS7Q96PZ0 661 aaKnown RBP16.34■□□□□ 0.21
DDX11-223ENST00000542838 CABP2Q9NPB3 220 aa16.34■□□□□ 0.21
DDX11-223ENST00000542838 SSH1Q8WYL5 1049 aa16.34■□□□□ 0.21
DDX11-223ENST00000542838 RSPH6AQ9H0K4 717 aa16.34■□□□□ 0.21
DDX11-223ENST00000542838 CHMP5Q9NZZ3 219 aa16.34■□□□□ 0.21
DDX11-223ENST00000542838 GLI2P10070 1586 aa16.34■□□□□ 0.21
DDX11-223ENST00000542838 TULP4Q9NRJ4 1543 aa16.34■□□□□ 0.21
DDX11-223ENST00000542838 NUTM2DQ5VT03 806 aaPredicted RBP16.34■□□□□ 0.21
DDX11-223ENST00000542838 TMPOP42166 694 aaKnown RBP16.33■□□□□ 0.21
DDX11-223ENST00000542838 ATF7IPQ6VMQ6 1270 aa16.33■□□□□ 0.21
DDX11-223ENST00000542838 GOLGA6L3A6NEY3 463 aa16.33■□□□□ 0.2
DDX11-223ENST00000542838 PLEKHF1Q96S99 279 aa16.32■□□□□ 0.2
DDX11-223ENST00000542838 GZF1Q9H116 711 aaPredicted RBP16.32■□□□□ 0.2
DDX11-223ENST00000542838 NOB1Q9ULX3 412 aaKnown RBP16.32■□□□□ 0.2
DDX11-223ENST00000542838 CD109Q6YHK3 1445 aa16.32■□□□□ 0.2
DDX11-223ENST00000542838 ARHGEF28Q8N1W1 1705 aaKnown RBP16.32■□□□□ 0.2
DDX11-223ENST00000542838 SAFB2Q14151 953 aaKnown RBP eCLIP16.32■□□□□ 0.2
DDX11-223ENST00000542838 TRIM35Q9UPQ4 493 aa16.32■□□□□ 0.2
DDX11-223ENST00000542838 RRAGDQ9NQL2 400 aaPredicted RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms