RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 KRI1Q8N9T8 703 aaKnown RBP6.46□□□□□ -1.38
KNTC1-213ENST00000542727 USB1Q9BQ65 265 aaKnown RBP6.46□□□□□ -1.38
KNTC1-213ENST00000542727 PRDM9Q9NQV7 894 aa6.46□□□□□ -1.38
KNTC1-213ENST00000542727 PKD2L1Q9P0L9 805 aa6.46□□□□□ -1.38
KNTC1-213ENST00000542727 HOXA2O43364 376 aa6.45□□□□□ -1.38
KNTC1-213ENST00000542727 FOXC1Q12948 553 aa6.45□□□□□ -1.38
KNTC1-213ENST00000542727 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.45□□□□□ -1.38
KNTC1-213ENST00000542727 CRIPAKQ8N1N5 446 aa6.45□□□□□ -1.38
KNTC1-213ENST00000542727 FAM217BQ9NTX9 383 aaPredicted RBP6.45□□□□□ -1.38
KNTC1-213ENST00000542727 DXOO77932 396 aaKnown RBP6.44□□□□□ -1.38
KNTC1-213ENST00000542727 CTC1Q2NKJ3 1217 aa6.44□□□□□ -1.38
KNTC1-213ENST00000542727 CYP4X1Q8N118 509 aa6.44□□□□□ -1.38
KNTC1-213ENST00000542727 TOR4AQ9NXH8 423 aa6.44□□□□□ -1.38
KNTC1-213ENST00000542727 AVPP01185 164 aa6.43□□□□□ -1.38
KNTC1-213ENST00000542727 NUTM1Q86Y26 1132 aa6.43□□□□□ -1.38
KNTC1-213ENST00000542727 REPIN1Q9BWE0 567 aaKnown RBP6.43□□□□□ -1.38
KNTC1-213ENST00000542727 WNT7AO00755 349 aa6.42□□□□□ -1.38
KNTC1-213ENST00000542727 TRIM32Q13049 653 aa6.42□□□□□ -1.38
KNTC1-213ENST00000542727 AAASQ9NRG9 546 aa6.41□□□□□ -1.38
KNTC1-213ENST00000542727 SMCPP49901 116 aaPredicted RBP6.4□□□□□ -1.38
KNTC1-213ENST00000542727 BARGINQ6ZT62 677 aa6.4□□□□□ -1.38
KNTC1-213ENST00000542727 RETREG3Q86VR2 466 aa6.4□□□□□ -1.38
KNTC1-213ENST00000542727 TTC24A2A3L6 582 aaPredicted RBP6.39□□□□□ -1.39
KNTC1-213ENST00000542727 ZMYND10O75800 440 aa6.39□□□□□ -1.39
KNTC1-213ENST00000542727 JUNDP17535 347 aa6.39□□□□□ -1.39
KNTC1-213ENST00000542727 WNT7BP56706 349 aa6.39□□□□□ -1.39
KNTC1-213ENST00000542727 AMHR2Q16671 573 aa6.39□□□□□ -1.39
KNTC1-213ENST00000542727 SNIP1Q8TAD8 396 aaKnown RBP6.39□□□□□ -1.39
KNTC1-213ENST00000542727 AXIN1O15169 862 aa6.38□□□□□ -1.39
KNTC1-213ENST00000542727 HLA-CQ95604 372 aa6.38□□□□□ -1.39
KNTC1-213ENST00000542727 ZNF775Q96BV0 537 aaPredicted RBP6.38□□□□□ -1.39
KNTC1-213ENST00000542727 FDX1P10109 184 aa6.37□□□□□ -1.39
KNTC1-213ENST00000542727 SSTR3P32745 418 aaPredicted RBP6.37□□□□□ -1.39
KNTC1-213ENST00000542727 TTLL12Q14166 644 aaPredicted RBP6.37□□□□□ -1.39
KNTC1-213ENST00000542727 DIXDC1Q155Q3 683 aa6.37□□□□□ -1.39
KNTC1-213ENST00000542727 CCDC24Q8N4L8 307 aa6.37□□□□□ -1.39
KNTC1-213ENST00000542727 ST8SIA5O15466 376 aa6.36□□□□□ -1.39
KNTC1-213ENST00000542727 GJA5P36382 358 aa6.36□□□□□ -1.39
KNTC1-213ENST00000542727 NUDT12Q9BQG2 462 aa6.36□□□□□ -1.39
KNTC1-213ENST00000542727 SPDYE5A6NIY4 337 aa6.35□□□□□ -1.39
KNTC1-213ENST00000542727 GUCA2AQ02747 115 aa6.35□□□□□ -1.39
KNTC1-213ENST00000542727 ZC3H15Q8WU90 426 aaKnown RBP6.35□□□□□ -1.39
KNTC1-213ENST00000542727 SPIRE2Q8WWL2 714 aa6.35□□□□□ -1.39
KNTC1-213ENST00000542727 MRGPRX2Q96LB1 330 aa6.35□□□□□ -1.39
KNTC1-213ENST00000542727 C6orf229H3BNL8 230 aa6.34□□□□□ -1.39
KNTC1-213ENST00000542727 CCNYL3P0C7X3 344 aa6.34□□□□□ -1.39
KNTC1-213ENST00000542727 SMPD1P17405 629 aa6.34□□□□□ -1.39
KNTC1-213ENST00000542727 PTPRNQ16849 979 aa6.34□□□□□ -1.39
KNTC1-213ENST00000542727 GIGYF2Q6Y7W6 1299 aaKnown RBP6.34□□□□□ -1.39
KNTC1-213ENST00000542727 MS4A1P11836 297 aa6.33□□□□□ -1.4
KNTC1-213ENST00000542727 RC3H1Q5TC82 1133 aaKnown RBP6.33□□□□□ -1.4
KNTC1-213ENST00000542727 DESI1Q6ICB0 168 aa6.33□□□□□ -1.4
KNTC1-213ENST00000542727 POTECB2RU33 542 aa6.32□□□□□ -1.4
KNTC1-213ENST00000542727 MTMR2Q13614 643 aa6.32□□□□□ -1.4
KNTC1-213ENST00000542727 SYMPKQ92797 1274 aaKnown RBP6.32□□□□□ -1.4
KNTC1-213ENST00000542727 PCDHGC3Q9UN70 934 aa6.32□□□□□ -1.4
KNTC1-213ENST00000542727 SKOR1P84550 965 aa6.31□□□□□ -1.4
KNTC1-213ENST00000542727 SENP2Q9HC62 589 aa6.31□□□□□ -1.4
KNTC1-213ENST00000542727 MOXD2PA6NHM9 499 aa6.3□□□□□ -1.4
KNTC1-213ENST00000542727 C11orf95C9JLR9 678 aaPredicted RBP6.3□□□□□ -1.4
KNTC1-213ENST00000542727 J3QL48 77 aa6.3□□□□□ -1.4
KNTC1-213ENST00000542727 EHBP1Q8NDI1 1231 aa6.3□□□□□ -1.4
KNTC1-213ENST00000542727 BEGAINQ9BUH8 593 aa6.3□□□□□ -1.4
KNTC1-213ENST00000542727 PARP9Q8IXQ6 854 aa6.29□□□□□ -1.4
KNTC1-213ENST00000542727 PRR7Q8TB68 274 aa6.29□□□□□ -1.4
KNTC1-213ENST00000542727 KIFC2Q96AC6 838 aa6.29□□□□□ -1.4
KNTC1-213ENST00000542727 AK7Q96M32 723 aa6.29□□□□□ -1.4
KNTC1-213ENST00000542727 ATP13A2Q9NQ11 1180 aa6.29□□□□□ -1.4
KNTC1-213ENST00000542727 EVA1BQ9NVM1 165 aa6.29□□□□□ -1.4
KNTC1-213ENST00000542727 GMPR2Q9P2T1 348 aaKnown RBP6.29□□□□□ -1.4
KNTC1-213ENST00000542727 NDUFV2P19404 249 aa6.28□□□□□ -1.4
KNTC1-213ENST00000542727 KCNH2Q12809 1159 aa6.28□□□□□ -1.4
KNTC1-213ENST00000542727 RSBN1LQ6PCB5 846 aaPredicted RBP6.28□□□□□ -1.4
KNTC1-213ENST00000542727 TREML4Q6UXN2 200 aa6.28□□□□□ -1.4
KNTC1-213ENST00000542727 TBC1D2Q9BYX2 928 aa6.28□□□□□ -1.4
KNTC1-213ENST00000542727 UNC93B1Q9H1C4 597 aa6.28□□□□□ -1.4
KNTC1-213ENST00000542727 DACH1Q9UI36 760 aa6.28□□□□□ -1.4
KNTC1-213ENST00000542727 TRIM66O15016 1216 aa6.27□□□□□ -1.41
KNTC1-213ENST00000542727 ALDH1A1P00352 501 aa6.27□□□□□ -1.41
KNTC1-213ENST00000542727 PRPF38BQ5VTL8 546 aaKnown RBP6.27□□□□□ -1.41
KNTC1-213ENST00000542727 PTCRAQ6ISU1 281 aaPredicted RBP6.27□□□□□ -1.41
KNTC1-213ENST00000542727 HPS1Q92902 700 aa6.27□□□□□ -1.41
KNTC1-213ENST00000542727 TRIM47Q96LD4 638 aa6.27□□□□□ -1.41
KNTC1-213ENST00000542727 ZBTB3Q9H5J0 574 aa6.27□□□□□ -1.41
KNTC1-213ENST00000542727 WASF2Q9Y6W5 498 aa6.27□□□□□ -1.41
KNTC1-213ENST00000542727 PLEKHG3A1L390 1219 aa6.26□□□□□ -1.41
KNTC1-213ENST00000542727 SPTLC1O15269 473 aa6.26□□□□□ -1.41
KNTC1-213ENST00000542727 SIAH2O43255 324 aa6.26□□□□□ -1.41
KNTC1-213ENST00000542727 SH3BP2P78314 561 aa6.26□□□□□ -1.41
KNTC1-213ENST00000542727 MPNDQ8N594 471 aa6.26□□□□□ -1.41
KNTC1-213ENST00000542727 VARSP26640 1264 aaKnown RBP6.25□□□□□ -1.41
KNTC1-213ENST00000542727 TUSC1Q2TAM9 212 aa6.25□□□□□ -1.41
KNTC1-213ENST00000542727 LCE2AQ5TA79 106 aaPredicted RBP6.25□□□□□ -1.41
KNTC1-213ENST00000542727 WFS1O76024 890 aa6.24□□□□□ -1.41
KNTC1-213ENST00000542727 LYPD8Q6UX82 237 aa6.24□□□□□ -1.41
KNTC1-213ENST00000542727 ZNF511Q8NB15 262 aa6.24□□□□□ -1.41
KNTC1-213ENST00000542727 RIC3Q7Z5B4 369 aa6.23□□□□□ -1.41
KNTC1-213ENST00000542727 CAPN5O15484 640 aaPredicted RBP6.22□□□□□ -1.41
KNTC1-213ENST00000542727 HRCP23327 699 aa6.22□□□□□ -1.41
KNTC1-213ENST00000542727 PDE4DQ08499 809 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms