RNA–Protein interactions for RNA: ENST00000541968.1

RAP1B-226, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 3

Gene RAP1B, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-226ENST00000541968 SYMPKQ92797 1274 aaKnown RBP10.88□□□□□ -0.67
RAP1B-226ENST00000541968 USB1Q9BQ65 265 aaKnown RBP10.88□□□□□ -0.67
RAP1B-226ENST00000541968 MOXD2PA6NHM9 499 aa10.87□□□□□ -0.67
RAP1B-226ENST00000541968 FCF1Q9Y324 198 aaKnown RBP10.87□□□□□ -0.67
RAP1B-226ENST00000541968 TBC1D2Q9BYX2 928 aa10.86□□□□□ -0.67
RAP1B-226ENST00000541968 GFRA3O60609 400 aa10.85□□□□□ -0.67
RAP1B-226ENST00000541968 PCDHGC3Q9UN70 934 aa10.85□□□□□ -0.67
RAP1B-226ENST00000541968 SPRYD7Q5W111 196 aa10.84□□□□□ -0.67
RAP1B-226ENST00000541968 C6orf229H3BNL8 230 aa10.83□□□□□ -0.68
RAP1B-226ENST00000541968 DIXDC1Q155Q3 683 aa10.82□□□□□ -0.68
RAP1B-226ENST00000541968 MMP16P51512 607 aa10.81□□□□□ -0.68
RAP1B-226ENST00000541968 ZNF598Q86UK7 904 aaKnown RBP10.81□□□□□ -0.68
RAP1B-226ENST00000541968 RETREG3Q86VR2 466 aa10.81□□□□□ -0.68
RAP1B-226ENST00000541968 DXOO77932 396 aaKnown RBP10.8□□□□□ -0.68
RAP1B-226ENST00000541968 ZNF697Q5TEC3 545 aa10.8□□□□□ -0.68
RAP1B-226ENST00000541968 PDZRN3Q9UPQ7 1066 aa10.8□□□□□ -0.68
RAP1B-226ENST00000541968 LAPTM4AQ15012 233 aa10.79□□□□□ -0.68
RAP1B-226ENST00000541968 RSBN1LQ6PCB5 846 aaPredicted RBP10.79□□□□□ -0.68
RAP1B-226ENST00000541968 Q6ZNB5 142 aa10.78□□□□□ -0.68
RAP1B-226ENST00000541968 CCDC24Q8N4L8 307 aa10.78□□□□□ -0.68
RAP1B-226ENST00000541968 ZBTB24O43167 697 aaPredicted RBP10.77□□□□□ -0.69
RAP1B-226ENST00000541968 JUNDP17535 347 aa10.77□□□□□ -0.69
RAP1B-226ENST00000541968 RPIAP49247 311 aa10.77□□□□□ -0.69
RAP1B-226ENST00000541968 GPBP1L1Q9HC44 474 aaPredicted RBP10.77□□□□□ -0.69
RAP1B-226ENST00000541968 PCDHB15Q9Y5E8 787 aa10.77□□□□□ -0.69
RAP1B-226ENST00000541968 SPTLC1O15269 473 aa10.76□□□□□ -0.69
RAP1B-226ENST00000541968 CD2BP2O95400 341 aaKnown RBP10.76□□□□□ -0.69
RAP1B-226ENST00000541968 MTMR2Q13614 643 aa10.76□□□□□ -0.69
RAP1B-226ENST00000541968 TRIM67Q6ZTA4 783 aa10.76□□□□□ -0.69
RAP1B-226ENST00000541968 RIC3Q7Z5B4 369 aa10.76□□□□□ -0.69
RAP1B-226ENST00000541968 NRG2O14511 850 aaPredicted RBP10.75□□□□□ -0.69
RAP1B-226ENST00000541968 GJA5P36382 358 aa10.75□□□□□ -0.69
RAP1B-226ENST00000541968 CSPP1Q1MSJ5 1256 aa10.75□□□□□ -0.69
RAP1B-226ENST00000541968 MYSM1Q5VVJ2 828 aa10.75□□□□□ -0.69
RAP1B-226ENST00000541968 KDM4CQ9H3R0 1056 aa10.75□□□□□ -0.69
RAP1B-226ENST00000541968 PRR7Q8TB68 274 aa10.74□□□□□ -0.69
RAP1B-226ENST00000541968 TNFRSF10AO00220 468 aa10.73□□□□□ -0.69
RAP1B-226ENST00000541968 FOXC1Q12948 553 aa10.72□□□□□ -0.69
RAP1B-226ENST00000541968 NUDT12Q9BQG2 462 aa10.72□□□□□ -0.69
RAP1B-226ENST00000541968 LIMD1Q9UGP4 676 aa10.72□□□□□ -0.69
RAP1B-226ENST00000541968 SPDYE5A6NIY4 337 aa10.71□□□□□ -0.69
RAP1B-226ENST00000541968 GDF9O60383 454 aa10.71□□□□□ -0.69
RAP1B-226ENST00000541968 HRCP23327 699 aa10.71□□□□□ -0.69
RAP1B-226ENST00000541968 CABLES1Q8TDN4 633 aa10.71□□□□□ -0.69
RAP1B-226ENST00000541968 ZBTB3Q9H5J0 574 aa10.7□□□□□ -0.7
RAP1B-226ENST00000541968 PRR20EP86478 221 aa10.69□□□□□ -0.7
RAP1B-226ENST00000541968 PRR20CP86479 221 aa10.69□□□□□ -0.7
RAP1B-226ENST00000541968 PRR20DP86480 221 aa10.69□□□□□ -0.7
RAP1B-226ENST00000541968 PRR20BP86481 221 aa10.69□□□□□ -0.7
RAP1B-226ENST00000541968 PRR20AP86496 221 aa10.69□□□□□ -0.7
RAP1B-226ENST00000541968 TRIM32Q13049 653 aa10.69□□□□□ -0.7
RAP1B-226ENST00000541968 FAM117AQ9C073 453 aa10.69□□□□□ -0.7
RAP1B-226ENST00000541968 RSPH6AQ9H0K4 717 aa10.69□□□□□ -0.7
RAP1B-226ENST00000541968 POLR3EQ9NVU0 708 aa10.69□□□□□ -0.7
RAP1B-226ENST00000541968 PKD2L1Q9P0L9 805 aa10.69□□□□□ -0.7
RAP1B-226ENST00000541968 TPRNQ4KMQ1 711 aa10.68□□□□□ -0.7
RAP1B-226ENST00000541968 NUTM2BA6NNL0 878 aaPredicted RBP10.67□□□□□ -0.7
RAP1B-226ENST00000541968 NUTM2EB1AL46 878 aaPredicted RBP10.67□□□□□ -0.7
RAP1B-226ENST00000541968 CFAP99D6REC4 459 aa10.67□□□□□ -0.7
RAP1B-226ENST00000541968 CLK2P49760 499 aaKnown RBP10.67□□□□□ -0.7
RAP1B-226ENST00000541968 NUTM2DQ5VT03 806 aaPredicted RBP10.67□□□□□ -0.7
RAP1B-226ENST00000541968 PRPF38BQ5VTL8 546 aaKnown RBP10.67□□□□□ -0.7
RAP1B-226ENST00000541968 PTCRAQ6ISU1 281 aaPredicted RBP10.67□□□□□ -0.7
RAP1B-226ENST00000541968 NUTM2AQ8IVF1 878 aaPredicted RBP10.67□□□□□ -0.7
RAP1B-226ENST00000541968 CCNYL3P0C7X3 344 aa10.66□□□□□ -0.7
RAP1B-226ENST00000541968 QPCTQ16769 361 aa10.66□□□□□ -0.7
RAP1B-226ENST00000541968 PTPRNQ16849 979 aa10.66□□□□□ -0.7
RAP1B-226ENST00000541968 DDRGK1Q96HY6 314 aa10.66□□□□□ -0.7
RAP1B-226ENST00000541968 DESI1Q6ICB0 168 aa10.65□□□□□ -0.7
RAP1B-226ENST00000541968 TRAF7Q6Q0C0 670 aa10.65□□□□□ -0.7
RAP1B-226ENST00000541968 TSC1Q92574 1164 aa10.64□□□□□ -0.71
RAP1B-226ENST00000541968 LCE2BO14633 110 aa10.63□□□□□ -0.71
RAP1B-226ENST00000541968 LILRB3O75022 631 aa10.63□□□□□ -0.71
RAP1B-226ENST00000541968 NEUROD2Q15784 382 aa10.63□□□□□ -0.71
RAP1B-226ENST00000541968 TUSC1Q2TAM9 212 aa10.63□□□□□ -0.71
RAP1B-226ENST00000541968 PKDCCQ504Y2 493 aa10.63□□□□□ -0.71
RAP1B-226ENST00000541968 EVA1BQ9NVM1 165 aa10.63□□□□□ -0.71
RAP1B-226ENST00000541968 ATP1B4Q9UN42 357 aaPredicted RBP10.63□□□□□ -0.71
RAP1B-226ENST00000541968 FAM187AA6NFU0 413 aa10.62□□□□□ -0.71
RAP1B-226ENST00000541968 PLEKHG3A1L390 1219 aa10.61□□□□□ -0.71
RAP1B-226ENST00000541968 WNT7AO00755 349 aa10.61□□□□□ -0.71
RAP1B-226ENST00000541968 SKOR1P84550 965 aa10.61□□□□□ -0.71
RAP1B-226ENST00000541968 KCNH2Q12809 1159 aa10.61□□□□□ -0.71
RAP1B-226ENST00000541968 RTL5Q5HYW3 569 aaPredicted RBP10.61□□□□□ -0.71
RAP1B-226ENST00000541968 LYPD8Q6UX82 237 aa10.61□□□□□ -0.71
RAP1B-226ENST00000541968 CYP4X1Q8N118 509 aa10.61□□□□□ -0.71
RAP1B-226ENST00000541968 CTHP32929 405 aa10.6□□□□□ -0.71
RAP1B-226ENST00000541968 SKIV2LQ15477 1246 aaKnown RBP10.6□□□□□ -0.71
RAP1B-226ENST00000541968 SH3D19Q5HYK7 790 aa10.6□□□□□ -0.71
RAP1B-226ENST00000541968 UNC93B1Q9H1C4 597 aa10.6□□□□□ -0.71
RAP1B-226ENST00000541968 DGAT1O75907 488 aa10.59□□□□□ -0.71
RAP1B-226ENST00000541968 RC3H1Q5TC82 1133 aaKnown RBP10.59□□□□□ -0.71
RAP1B-226ENST00000541968 PROCA1Q8NCQ7 364 aaPredicted RBP10.59□□□□□ -0.71
RAP1B-226ENST00000541968 MRGPRX2Q96LB1 330 aa10.59□□□□□ -0.71
RAP1B-226ENST00000541968 TOR4AQ9NXH8 423 aa10.59□□□□□ -0.71
RAP1B-226ENST00000541968 TTC24A2A3L6 582 aaPredicted RBP10.58□□□□□ -0.72
RAP1B-226ENST00000541968 PER1O15534 1290 aaPredicted RBP10.58□□□□□ -0.72
RAP1B-226ENST00000541968 WNT7BP56706 349 aa10.58□□□□□ -0.72
RAP1B-226ENST00000541968 LINC01559Q495D7 138 aa10.57□□□□□ -0.72
RAP1B-226ENST00000541968 HELBQ8NG08 1087 aaPredicted RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms