RNA–Protein interactions for RNA: ENST00000541873.6

RFXANK-210, Transcript of regulatory factor X associated ankyrin containing protein, human

TSL 2

Gene RFXANK, Length 1,002 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFXANK-210	ENST00000541873	STK26	Q9P289	416 aa		29.17	■■■□□ 2.26
RFXANK-210	ENST00000541873	WAPL	Q7Z5K2	1190 aa		29.16	■■■□□ 2.26
RFXANK-210	ENST00000541873	SOS2	Q07890	1332 aa	Predicted RBP	29.16	■■■□□ 2.26
RFXANK-210	ENST00000541873	LAMC1	P11047	1609 aa		29.16	■■■□□ 2.26
RFXANK-210	ENST00000541873	CDC42BPG	Q6DT37	1551 aa		29.13	■■■□□ 2.25
RFXANK-210	ENST00000541873	NRXN1	Q9ULB1	1477 aa		29.12	■■■□□ 2.25
RFXANK-210	ENST00000541873	C14orf93	Q9H972	538 aa	Known RBP	29.11	■■■□□ 2.25
RFXANK-210	ENST00000541873	PLEKHH1	Q9ULM0	1364 aa		29.11	■■■□□ 2.25
RFXANK-210	ENST00000541873	YTHDC2	Q9H6S0	1430 aa	Known RBP	29.1	■■■□□ 2.25
RFXANK-210	ENST00000541873	AFF2	P51816	1311 aa		29.08	■■■□□ 2.25
RFXANK-210	ENST00000541873	MYOM2	P54296	1465 aa		29.08	■■■□□ 2.25
RFXANK-210	ENST00000541873	ESCO1	Q5FWF5	840 aa		29.07	■■■□□ 2.24
RFXANK-210	ENST00000541873	CFAP70	Q5T0N1	1121 aa		29.06	■■■□□ 2.24
RFXANK-210	ENST00000541873	SIRT1	Q96EB6	747 aa		29.06	■■■□□ 2.24
RFXANK-210	ENST00000541873	KNDC1	Q76NI1	1749 aa		29.06	■■■□□ 2.24
RFXANK-210	ENST00000541873	HRC	P23327	699 aa		29.03	■■■□□ 2.24
RFXANK-210	ENST00000541873	RXRB	P28702	533 aa		29.03	■■■□□ 2.24
RFXANK-210	ENST00000541873	C8orf37	Q96NL8	207 aa		29.03	■■■□□ 2.24
RFXANK-210	ENST00000541873	NPHP3	Q7Z494	1330 aa		29.02	■■■□□ 2.24
RFXANK-210	ENST00000541873	NUTM2F	A1L443	756 aa		29.01	■■■□□ 2.23
RFXANK-210	ENST00000541873	FOXO3	O43524	673 aa		29	■■■□□ 2.23
RFXANK-210	ENST00000541873	DHX57	Q6P158	1386 aa	Known RBP	29	■■■□□ 2.23
RFXANK-210	ENST00000541873	PXDN	Q92626	1479 aa		28.99	■■■□□ 2.23
RFXANK-210	ENST00000541873	ADAMTS2	O95450	1211 aa		28.99	■■■□□ 2.23
RFXANK-210	ENST00000541873	CDK12	Q9NYV4	1490 aa	Predicted RBP	28.96	■■■□□ 2.23
RFXANK-210	ENST00000541873	XPC	Q01831	940 aa	Predicted RBP	28.95	■■■□□ 2.22
RFXANK-210	ENST00000541873	NGLY1	Q96IV0	654 aa		28.95	■■■□□ 2.22
RFXANK-210	ENST00000541873	QTRT2	Q9H974	415 aa	Known RBP	28.94	■■■□□ 2.22
RFXANK-210	ENST00000541873	PRAM1	Q96QH2	718 aa		28.93	■■■□□ 2.22
RFXANK-210	ENST00000541873	COL22A1	Q8NFW1	1626 aa	Predicted RBP	28.93	■■■□□ 2.22
RFXANK-210	ENST00000541873	FMN2	Q9NZ56	1722 aa		28.92	■■■□□ 2.22
RFXANK-210	ENST00000541873	ADGRB1	O14514	1584 aa		28.91	■■■□□ 2.22
RFXANK-210	ENST00000541873	RBM6	P78332	1123 aa	Known RBP	28.9	■■■□□ 2.22
RFXANK-210	ENST00000541873	FNBP4	Q8N3X1	1017 aa	Predicted RBP	28.89	■■■□□ 2.22
RFXANK-210	ENST00000541873	DCAF11	Q8TEB1	546 aa		28.89	■■■□□ 2.22
RFXANK-210	ENST00000541873	DLC1	Q96QB1	1528 aa		28.89	■■■□□ 2.21
RFXANK-210	ENST00000541873	SAFB2	Q14151	953 aa	Known RBP eCLIP	28.88	■■■□□ 2.21
RFXANK-210	ENST00000541873	UPF1	Q92900	1129 aa	Known RBP eCLIP	28.88	■■■□□ 2.21
RFXANK-210	ENST00000541873	KDM2A	Q9Y2K7	1162 aa		28.88	■■■□□ 2.21
RFXANK-210	ENST00000541873	STAC3	Q96MF2	364 aa		28.86	■■■□□ 2.21
RFXANK-210	ENST00000541873	USP21	Q9UK80	565 aa		28.85	■■■□□ 2.21
RFXANK-210	ENST00000541873	SPATA31A3	Q5VYP0	1347 aa		28.85	■■■□□ 2.21
RFXANK-210	ENST00000541873	RGS12	O14924	1447 aa		28.85	■■■□□ 2.21
RFXANK-210	ENST00000541873	POGK	Q9P215	609 aa		28.84	■■■□□ 2.21
RFXANK-210	ENST00000541873	KRT28	Q7Z3Y7	464 aa		28.83	■■■□□ 2.21
RFXANK-210	ENST00000541873	PHF8	Q9UPP1	1060 aa		28.83	■■■□□ 2.21
RFXANK-210	ENST00000541873	KIF1A	Q12756	1690 aa		28.83	■■■□□ 2.21
RFXANK-210	ENST00000541873	TRAK1	Q9UPV9	953 aa		28.82	■■■□□ 2.2
RFXANK-210	ENST00000541873	TRPC5	Q9UL62	973 aa	Predicted RBP	28.8	■■■□□ 2.2
RFXANK-210	ENST00000541873	ATRN	O75882	1429 aa		28.78	■■■□□ 2.2
RFXANK-210	ENST00000541873	ANKAR	Q7Z5J8	1434 aa		28.77	■■■□□ 2.2
RFXANK-210	ENST00000541873	ADGRB2	O60241	1585 aa		28.77	■■■□□ 2.2
RFXANK-210	ENST00000541873	BCL9L	Q86UU0	1499 aa		28.77	■■■□□ 2.2
RFXANK-210	ENST00000541873	HIRIP3	Q9BW71	556 aa	Predicted RBP	28.75	■■■□□ 2.19
RFXANK-210	ENST00000541873	PSME1	Q06323	249 aa		28.74	■■■□□ 2.19
RFXANK-210	ENST00000541873	TNS3	Q68CZ2	1445 aa		28.74	■■■□□ 2.19
RFXANK-210	ENST00000541873	USP32	Q8NFA0	1604 aa		28.73	■■■□□ 2.19
RFXANK-210	ENST00000541873	RGPD8	O14715	1765 aa	Predicted RBP	28.73	■■■□□ 2.19
RFXANK-210	ENST00000541873	SBNO1	A3KN83	1393 aa		28.73	■■■□□ 2.19
RFXANK-210	ENST00000541873	MINK1	Q8N4C8	1332 aa	Predicted RBP	28.72	■■■□□ 2.19
RFXANK-210	ENST00000541873	PMFBP1	Q8TBY8	1022 aa		28.72	■■■□□ 2.19
RFXANK-210	ENST00000541873	PRR36	Q9H6K5	1346 aa		28.7	■■■□□ 2.19
RFXANK-210	ENST00000541873	WASL	O00401	505 aa	Predicted RBP	28.69	■■■□□ 2.18
RFXANK-210	ENST00000541873	MARF1	Q9Y4F3	1742 aa	Known RBP	28.68	■■■□□ 2.18
RFXANK-210	ENST00000541873	SLIT2	O94813	1529 aa		28.68	■■■□□ 2.18
RFXANK-210	ENST00000541873	CABLES1	Q8TDN4	633 aa		28.67	■■■□□ 2.18
RFXANK-210	ENST00000541873	EIF3A	Q14152	1382 aa	Known RBP	28.66	■■■□□ 2.18
RFXANK-210	ENST00000541873	ARHGEF10	O15013	1369 aa		28.65	■■■□□ 2.18
RFXANK-210	ENST00000541873	TULP4	Q9NRJ4	1543 aa		28.65	■■■□□ 2.18
RFXANK-210	ENST00000541873	UNC5CL	Q8IV45	518 aa		28.65	■■■□□ 2.18
RFXANK-210	ENST00000541873	GJD4	Q96KN9	370 aa	Predicted RBP	28.65	■■■□□ 2.18
RFXANK-210	ENST00000541873	LMOD2	Q6P5Q4	547 aa		28.62	■■■□□ 2.17
RFXANK-210	ENST00000541873	HAP1	P54257	671 aa	Predicted RBP	28.6	■■■□□ 2.17
RFXANK-210	ENST00000541873	ATAD2	Q6PL18	1390 aa		28.6	■■■□□ 2.17
RFXANK-210	ENST00000541873	ARHGEF28	Q8N1W1	1705 aa	Known RBP	28.59	■■■□□ 2.17
RFXANK-210	ENST00000541873	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	28.58	■■■□□ 2.17
RFXANK-210	ENST00000541873	PLEKHG5	O94827	1062 aa		28.58	■■■□□ 2.17
RFXANK-210	ENST00000541873	GPRASP1	Q5JY77	1395 aa		28.58	■■■□□ 2.17
RFXANK-210	ENST00000541873	RALGAPB	Q86X10	1494 aa		28.57	■■■□□ 2.16
RFXANK-210	ENST00000541873	NBPF1	Q3BBV0	1214 aa		28.56	■■■□□ 2.16
RFXANK-210	ENST00000541873	TRPM3	Q9HCF6	1732 aa	Predicted RBP	28.56	■■■□□ 2.16
RFXANK-210	ENST00000541873	ATP7B	P35670	1465 aa		28.55	■■■□□ 2.16
RFXANK-210	ENST00000541873	NUDT16	Q96DE0	195 aa	Known RBP	28.55	■■■□□ 2.16
RFXANK-210	ENST00000541873	NGDN	Q8NEJ9	315 aa	Known RBP	28.54	■■■□□ 2.16
RFXANK-210	ENST00000541873	GLI3	P10071	1580 aa		28.54	■■■□□ 2.16
RFXANK-210	ENST00000541873	ABCA3	Q99758	1704 aa		28.53	■■■□□ 2.16
RFXANK-210	ENST00000541873	KIAA1210	Q9ULL0	1709 aa		28.53	■■■□□ 2.16
RFXANK-210	ENST00000541873	FAM83G	A6ND36	823 aa		28.53	■■■□□ 2.16
RFXANK-210	ENST00000541873	VPS72	Q15906	364 aa		28.52	■■■□□ 2.16
RFXANK-210	ENST00000541873	CDK19	Q9BWU1	502 aa		28.52	■■■□□ 2.16
RFXANK-210	ENST00000541873	EP400	Q96L91	3159 aa		28.52	■■■□□ 2.16
RFXANK-210	ENST00000541873	ALS2	Q96Q42	1657 aa		28.51	■■■□□ 2.15
RFXANK-210	ENST00000541873	L3MBTL2	Q969R5	705 aa		28.47	■■■□□ 2.15
RFXANK-210	ENST00000541873	NWD2	Q9ULI1	1742 aa		28.46	■■■□□ 2.15
RFXANK-210	ENST00000541873	PLCH1	Q4KWH8	1693 aa		28.45	■■■□□ 2.15
RFXANK-210	ENST00000541873	ONECUT3	O60422	494 aa	Predicted RBP	28.45	■■■□□ 2.14
RFXANK-210	ENST00000541873	PAK3	O75914	559 aa	Predicted RBP	28.45	■■■□□ 2.14
RFXANK-210	ENST00000541873	CCDC61	Q9Y6R9	512 aa		28.45	■■■□□ 2.14
RFXANK-210	ENST00000541873	POLR3A	O14802	1390 aa	Predicted RBP	28.44	■■■□□ 2.14
RFXANK-210	ENST00000541873	SEPT12	Q8IYM1	358 aa		28.43	■■■□□ 2.14

Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms