RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 BAG6P46379 1132 aa15.38■□□□□ 0.05
CHFR-220ENST00000541817 UNC5CLQ8IV45 518 aa15.38■□□□□ 0.05
CHFR-220ENST00000541817 PLEKHG5O94827 1062 aa15.36■□□□□ 0.05
CHFR-220ENST00000541817 KRT27Q7Z3Y8 459 aa15.36■□□□□ 0.05
CHFR-220ENST00000541817 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.35■□□□□ 0.05
CHFR-220ENST00000541817 IFFO2Q5TF58 517 aa15.35■□□□□ 0.05
CHFR-220ENST00000541817 CCDC9Q9Y3X0 531 aaKnown RBP15.35■□□□□ 0.05
CHFR-220ENST00000541817 FAM182BQ5T319 152 aa15.34■□□□□ 0.05
CHFR-220ENST00000541817 E9PCH4 1651 aa15.34■□□□□ 0.05
CHFR-220ENST00000541817 A0A0G2JS52 829 aa15.33■□□□□ 0.04
CHFR-220ENST00000541817 MYT1Q01538 1121 aa15.33■□□□□ 0.04
CHFR-220ENST00000541817 SPHKAPQ2M3C7 1700 aa15.33■□□□□ 0.04
CHFR-220ENST00000541817 ZNF326Q5BKZ1 582 aaKnown RBP15.32■□□□□ 0.04
CHFR-220ENST00000541817 SLIT2O94813 1529 aa15.32■□□□□ 0.04
CHFR-220ENST00000541817 FOXO3O43524 673 aa15.31■□□□□ 0.04
CHFR-220ENST00000541817 ESCO1Q5FWF5 840 aa15.31■□□□□ 0.04
CHFR-220ENST00000541817 PXDNQ92626 1479 aa15.29■□□□□ 0.04
CHFR-220ENST00000541817 SENP3-EIF4A1A0A087X0R7 540 aa15.29■□□□□ 0.04
CHFR-220ENST00000541817 NUTM2FA1L443 756 aa15.29■□□□□ 0.04
CHFR-220ENST00000541817 EZH2Q15910 746 aaKnown RBP15.29■□□□□ 0.04
CHFR-220ENST00000541817 ANKRD50Q9ULJ7 1429 aa15.28■□□□□ 0.04
CHFR-220ENST00000541817 NPHP3Q7Z494 1330 aa15.28■□□□□ 0.04
CHFR-220ENST00000541817 ROBO2Q9HCK4 1378 aa15.27■□□□□ 0.04
CHFR-220ENST00000541817 VPS72Q15906 364 aa15.27■□□□□ 0.04
CHFR-220ENST00000541817 CABLES1Q8TDN4 633 aa15.26■□□□□ 0.03
CHFR-220ENST00000541817 ONECUT3O60422 494 aaPredicted RBP15.25■□□□□ 0.03
CHFR-220ENST00000541817 FAM98CQ17RN3 349 aaKnown RBP15.25■□□□□ 0.03
CHFR-220ENST00000541817 VPS8Q8N3P4 1428 aa15.24■□□□□ 0.03
CHFR-220ENST00000541817 CAMTA1Q9Y6Y1 1673 aa15.23■□□□□ 0.03
CHFR-220ENST00000541817 ADGRL2O95490 1459 aa15.23■□□□□ 0.03
CHFR-220ENST00000541817 HAP1P54257 671 aaPredicted RBP15.23■□□□□ 0.03
CHFR-220ENST00000541817 RGPD1P0DJD0 1748 aa15.23■□□□□ 0.03
CHFR-220ENST00000541817 PLCH1Q4KWH8 1693 aa15.22■□□□□ 0.03
CHFR-220ENST00000541817 USP32Q8NFA0 1604 aa15.22■□□□□ 0.03
CHFR-220ENST00000541817 IQGAP3Q86VI3 1631 aa15.21■□□□□ 0.03
CHFR-220ENST00000541817 FAM50AQ14320 339 aaKnown RBP15.21■□□□□ 0.03
CHFR-220ENST00000541817 PPP1R1BQ9UD71 204 aaPredicted RBP15.21■□□□□ 0.03
CHFR-220ENST00000541817 SPATA31A3Q5VYP0 1347 aa15.2■□□□□ 0.02
CHFR-220ENST00000541817 ZNF784Q8NCA9 323 aaPredicted RBP15.2■□□□□ 0.02
CHFR-220ENST00000541817 TNS1Q9HBL0 1735 aaKnown RBP15.2■□□□□ 0.02
CHFR-220ENST00000541817 DCAF8L1A6NGE4 600 aa15.19■□□□□ 0.02
CHFR-220ENST00000541817 CAMKK2Q96RR4 588 aa15.18■□□□□ 0.02
CHFR-220ENST00000541817 NEXMIFQ5QGS0 1516 aa15.17■□□□□ 0.02
CHFR-220ENST00000541817 FAM83GA6ND36 823 aa15.17■□□□□ 0.02
CHFR-220ENST00000541817 TRIM37O94972 964 aa15.17■□□□□ 0.02
CHFR-220ENST00000541817 KRT28Q7Z3Y7 464 aa15.17■□□□□ 0.02
CHFR-220ENST00000541817 LMOD2Q6P5Q4 547 aa15.16■□□□□ 0.02
CHFR-220ENST00000541817 NWD2Q9ULI1 1742 aa15.15■□□□□ 0.02
CHFR-220ENST00000541817 LRPPRCP42704 1394 aaKnown RBP15.15■□□□□ 0.02
CHFR-220ENST00000541817 NUP155O75694 1391 aa15.14■□□□□ 0.01
CHFR-220ENST00000541817 APBA3O96018 575 aa15.14■□□□□ 0.01
CHFR-220ENST00000541817 C1QTNF8P60827 252 aa15.14■□□□□ 0.01
CHFR-220ENST00000541817 HFM1A2PYH4 1435 aa15.13■□□□□ 0.01
CHFR-220ENST00000541817 DISP2A7MBM2 1401 aa15.13■□□□□ 0.01
CHFR-220ENST00000541817 SPON1Q9HCB6 807 aa15.13■□□□□ 0.01
CHFR-220ENST00000541817 NAIPQ13075 1403 aa15.12■□□□□ 0.01
CHFR-220ENST00000541817 WAPLQ7Z5K2 1190 aa15.12■□□□□ 0.01
CHFR-220ENST00000541817 BTG4Q9NY30 223 aa15.12■□□□□ 0.01
CHFR-220ENST00000541817 CDC42BPGQ6DT37 1551 aa15.11■□□□□ 0.01
CHFR-220ENST00000541817 KCNQ2O43526 872 aa15.11■□□□□ 0.01
CHFR-220ENST00000541817 NRAPQ86VF7 1730 aa15.11■□□□□ 0.01
CHFR-220ENST00000541817 CLTCL1P53675 1640 aa15.1■□□□□ 0.01
CHFR-220ENST00000541817 ABCA3Q99758 1704 aa15.1■□□□□ 0.01
CHFR-220ENST00000541817 STK26Q9P289 416 aa15.1■□□□□ 0.01
CHFR-220ENST00000541817 NUP188Q5SRE5 1749 aa15.09■□□□□ 0.01
CHFR-220ENST00000541817 LOC105371045A0A1W2PR82 267 aa15.09■□□□□ 0.01
CHFR-220ENST00000541817 NINLQ9Y2I6 1382 aa15.09■□□□□ 0.01
CHFR-220ENST00000541817 RGPD8O14715 1765 aaPredicted RBP15.08■□□□□ 0.01
CHFR-220ENST00000541817 APLP2Q06481 763 aa15.08■□□□□ 0
CHFR-220ENST00000541817 CCDC144AA2RUR9 1427 aa15.08■□□□□ 0
CHFR-220ENST00000541817 TNS3Q68CZ2 1445 aa15.08■□□□□ 0
CHFR-220ENST00000541817 RREB1Q92766 1687 aa15.07■□□□□ 0
CHFR-220ENST00000541817 NBPF8Q3BBV2 869 aa15.07■□□□□ 0
CHFR-220ENST00000541817 NBPF14Q5TI25 921 aa15.07■□□□□ 0
CHFR-220ENST00000541817 SPATA31A5Q5VU36 1347 aa15.06■□□□□ 0
CHFR-220ENST00000541817 SPATA31A7Q8IWB4 1347 aa15.06■□□□□ 0
CHFR-220ENST00000541817 PLEKHH1Q9ULM0 1364 aa15.06■□□□□ 0
CHFR-220ENST00000541817 ADGRB2O60241 1585 aa15.06■□□□□ 0
CHFR-220ENST00000541817 VGFO15240 615 aaPredicted RBP15.05■□□□□ -0
CHFR-220ENST00000541817 KIF1BO60333 1816 aa15.05■□□□□ -0
CHFR-220ENST00000541817 THSD7AQ9UPZ6 1657 aa15.04■□□□□ -0
CHFR-220ENST00000541817 PSME1Q06323 249 aa15.04■□□□□ -0
CHFR-220ENST00000541817 FAM196AQ6ZSG2 479 aa15.04■□□□□ -0
CHFR-220ENST00000541817 FMN2Q9NZ56 1722 aa15.03■□□□□ -0
CHFR-220ENST00000541817 KIF1AQ12756 1690 aa15.03■□□□□ -0
CHFR-220ENST00000541817 PRAG1Q86YV5 1406 aa15.03■□□□□ -0
CHFR-220ENST00000541817 PDGFDQ9GZP0 370 aaPredicted RBP15.03■□□□□ -0
CHFR-220ENST00000541817 PHF8Q9UPP1 1060 aa15.03■□□□□ -0
CHFR-220ENST00000541817 ITGAEP38570 1179 aa15.02■□□□□ -0
CHFR-220ENST00000541817 NRKQ7Z2Y5 1582 aa15.02□□□□□ -0.01
CHFR-220ENST00000541817 PARD3Q8TEW0 1356 aa15□□□□□ -0.01
CHFR-220ENST00000541817 PMFBP1Q8TBY8 1022 aa15□□□□□ -0.01
CHFR-220ENST00000541817 COL14A1Q05707 1796 aaKnown RBP15□□□□□ -0.01
CHFR-220ENST00000541817 ZBTB7AO95365 584 aa14.99□□□□□ -0.01
CHFR-220ENST00000541817 TMEM132EQ6IEE7 984 aa14.99□□□□□ -0.01
CHFR-220ENST00000541817 USP35Q9P2H5 1018 aa14.99□□□□□ -0.01
CHFR-220ENST00000541817 CHD4Q14839 1912 aa14.99□□□□□ -0.01
CHFR-220ENST00000541817 SBNO1A3KN83 1393 aa14.98□□□□□ -0.01
CHFR-220ENST00000541817 MYOM1P52179 1685 aa14.98□□□□□ -0.01
CHFR-220ENST00000541817 STRN4Q9NRL3 753 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms