RNA–Protein interactions for RNA: ENST00000541295.5

LMO3-225, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-225ENST00000541295 TTC37Q6PGP7 1564 aa7.8□□□□□ -1.16
LMO3-225ENST00000541295 C9orf84Q5VXU9 1444 aa7.79□□□□□ -1.16
LMO3-225ENST00000541295 GZF1Q9H116 711 aaPredicted RBP7.79□□□□□ -1.16
LMO3-225ENST00000541295 ZCCHC11Q5TAX3 1644 aaKnown RBP7.79□□□□□ -1.16
LMO3-225ENST00000541295 ZNF513Q8N8E2 541 aaPredicted RBP7.79□□□□□ -1.16
LMO3-225ENST00000541295 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.79□□□□□ -1.16
LMO3-225ENST00000541295 ROCK1Q13464 1354 aa7.78□□□□□ -1.16
LMO3-225ENST00000541295 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.78□□□□□ -1.16
LMO3-225ENST00000541295 LETM1O95202 739 aaPredicted RBP7.78□□□□□ -1.16
LMO3-225ENST00000541295 CCDC96Q2M329 555 aa7.78□□□□□ -1.16
LMO3-225ENST00000541295 NCOA1Q15788 1441 aa7.78□□□□□ -1.16
LMO3-225ENST00000541295 MIER1Q8N108 512 aa7.77□□□□□ -1.16
LMO3-225ENST00000541295 KIF15Q9NS87 1388 aa7.77□□□□□ -1.16
LMO3-225ENST00000541295 SYCP2Q9BX26 1530 aa7.77□□□□□ -1.17
LMO3-225ENST00000541295 SATB1Q01826 763 aa7.77□□□□□ -1.17
LMO3-225ENST00000541295 MYBPC2Q14324 1141 aa7.77□□□□□ -1.17
LMO3-225ENST00000541295 DMTNQ08495 405 aa7.77□□□□□ -1.17
LMO3-225ENST00000541295 EFCAB2Q5VUJ9 269 aa7.77□□□□□ -1.17
LMO3-225ENST00000541295 NGEFQ8N5V2 710 aa7.77□□□□□ -1.17
LMO3-225ENST00000541295 PAIP2Q9BPZ3 127 aaKnown RBP7.77□□□□□ -1.17
LMO3-225ENST00000541295 ANKRD50Q9ULJ7 1429 aa7.77□□□□□ -1.17
LMO3-225ENST00000541295 SMARCA5O60264 1052 aaPredicted RBP7.76□□□□□ -1.17
LMO3-225ENST00000541295 RAI14Q9P0K7 980 aa7.76□□□□□ -1.17
LMO3-225ENST00000541295 SAMD9LQ8IVG5 1584 aa7.76□□□□□ -1.17
LMO3-225ENST00000541295 CCER2I3L3R5 266 aa7.76□□□□□ -1.17
LMO3-225ENST00000541295 IRF6O14896 467 aa7.76□□□□□ -1.17
LMO3-225ENST00000541295 SLC20A2Q08357 652 aa7.76□□□□□ -1.17
LMO3-225ENST00000541295 ANKRD13AQ8IZ07 590 aa7.76□□□□□ -1.17
LMO3-225ENST00000541295 PREX2Q70Z35 1606 aa7.76□□□□□ -1.17
LMO3-225ENST00000541295 KDM5BQ9UGL1 1544 aa7.76□□□□□ -1.17
LMO3-225ENST00000541295 NUP155O75694 1391 aa7.76□□□□□ -1.17
LMO3-225ENST00000541295 TPD52L2O43399 206 aaKnown RBP7.76□□□□□ -1.17
LMO3-225ENST00000541295 PKD2Q13563 968 aa7.76□□□□□ -1.17
LMO3-225ENST00000541295 CYB5RLQ6IPT4 315 aa7.76□□□□□ -1.17
LMO3-225ENST00000541295 CDC42BPBQ9Y5S2 1711 aa7.76□□□□□ -1.17
LMO3-225ENST00000541295 CCDC141Q6ZP82 1450 aa7.75□□□□□ -1.17
LMO3-225ENST00000541295 PPP1R15AO75807 674 aaPredicted RBP7.75□□□□□ -1.17
LMO3-225ENST00000541295 APBB1IPQ7Z5R6 666 aaPredicted RBP7.75□□□□□ -1.17
LMO3-225ENST00000541295 GTPBP4Q9BZE4 634 aaKnown RBP7.75□□□□□ -1.17
LMO3-225ENST00000541295 RBM27Q9P2N5 1060 aaKnown RBP7.75□□□□□ -1.17
LMO3-225ENST00000541295 UHRF1BP1LA0JNW5 1464 aa7.75□□□□□ -1.17
LMO3-225ENST00000541295 ADGBQ8N7X0 1667 aa7.75□□□□□ -1.17
LMO3-225ENST00000541295 SETDB1Q15047 1291 aa7.75□□□□□ -1.17
LMO3-225ENST00000541295 MYO5CQ9NQX4 1742 aa7.75□□□□□ -1.17
LMO3-225ENST00000541295 HMGB1P1B2RPK0 211 aaPredicted RBP7.74□□□□□ -1.17
LMO3-225ENST00000541295 RGL3Q3MIN7 710 aa7.74□□□□□ -1.17
LMO3-225ENST00000541295 CROCC2H7BZ55 1655 aa7.74□□□□□ -1.17
LMO3-225ENST00000541295 NBPF10Q6P3W6 841 aaKnown RBP7.74□□□□□ -1.17
LMO3-225ENST00000541295 WDR7Q9Y4E6 1490 aa7.74□□□□□ -1.17
LMO3-225ENST00000541295 DHX16O60231 1041 aaKnown RBP7.73□□□□□ -1.17
LMO3-225ENST00000541295 ASXL2Q76L83 1435 aa7.73□□□□□ -1.17
LMO3-225ENST00000541295 AFAP1Q8N556 730 aa7.73□□□□□ -1.17
LMO3-225ENST00000541295 DENND4BO75064 1496 aaPredicted RBP7.73□□□□□ -1.17
LMO3-225ENST00000541295 MBD5Q9P267 1494 aa7.73□□□□□ -1.17
LMO3-225ENST00000541295 MARCH6O60337 910 aa7.73□□□□□ -1.17
LMO3-225ENST00000541295 TSPAN18Q96SJ8 248 aa7.73□□□□□ -1.17
LMO3-225ENST00000541295 TSPYL1Q9H0U9 437 aa7.73□□□□□ -1.17
LMO3-225ENST00000541295 SPINK5Q9NQ38 1064 aaPredicted RBP7.73□□□□□ -1.17
LMO3-225ENST00000541295 BSDC1Q9NW68 430 aaPredicted RBP7.73□□□□□ -1.17
LMO3-225ENST00000541295 ADGRL2O95490 1459 aa7.73□□□□□ -1.17
LMO3-225ENST00000541295 ZKSCAN8Q15776 578 aaPredicted RBP7.72□□□□□ -1.17
LMO3-225ENST00000541295 WDR78Q5VTH9 848 aa7.72□□□□□ -1.17
LMO3-225ENST00000541295 SPRYD3Q8NCJ5 442 aa7.72□□□□□ -1.17
LMO3-225ENST00000541295 L3MBTL2Q969R5 705 aa7.72□□□□□ -1.17
LMO3-225ENST00000541295 CCDC97Q96F63 343 aaPredicted RBP7.72□□□□□ -1.17
LMO3-225ENST00000541295 IPO9Q96P70 1041 aaKnown RBP7.72□□□□□ -1.17
LMO3-225ENST00000541295 PLCH2O75038 1416 aa7.72□□□□□ -1.17
LMO3-225ENST00000541295 CLCN1P35523 988 aa7.72□□□□□ -1.17
LMO3-225ENST00000541295 CCDC181Q5TID7 509 aa7.72□□□□□ -1.17
LMO3-225ENST00000541295 ZRSR2Q15696 482 aaKnown RBP7.72□□□□□ -1.17
LMO3-225ENST00000541295 SPAG9O60271 1321 aaKnown RBP7.71□□□□□ -1.17
LMO3-225ENST00000541295 SHANK2Q9UPX8 1470 aa7.71□□□□□ -1.17
LMO3-225ENST00000541295 PAK3O75914 559 aaPredicted RBP7.71□□□□□ -1.17
LMO3-225ENST00000541295 DDX10Q13206 875 aaKnown RBP7.71□□□□□ -1.17
LMO3-225ENST00000541295 TRAPPC8Q9Y2L5 1435 aa7.71□□□□□ -1.17
LMO3-225ENST00000541295 ERCC3P19447 782 aa7.71□□□□□ -1.18
LMO3-225ENST00000541295 MSL3Q8N5Y2 521 aaKnown RBP7.71□□□□□ -1.18
LMO3-225ENST00000541295 PZPP20742 1482 aa7.71□□□□□ -1.18
LMO3-225ENST00000541295 ARHGEF12Q9NZN5 1544 aa7.71□□□□□ -1.18
LMO3-225ENST00000541295 MPHOSPH10O00566 681 aaKnown RBP7.71□□□□□ -1.18
LMO3-225ENST00000541295 NPM3O75607 178 aaKnown RBP7.71□□□□□ -1.18
LMO3-225ENST00000541295 ARHGEF5Q12774 1597 aa7.7□□□□□ -1.18
LMO3-225ENST00000541295 GOLGA6CA6NDK9 693 aa7.7□□□□□ -1.18
LMO3-225ENST00000541295 GOLGA6BA6NDN3 693 aa7.7□□□□□ -1.18
LMO3-225ENST00000541295 GOLGA6DP0CG33 693 aa7.7□□□□□ -1.18
LMO3-225ENST00000541295 FOXD4Q12950 439 aaPredicted RBP7.7□□□□□ -1.18
LMO3-225ENST00000541295 CREBRFQ8IUR6 639 aa7.7□□□□□ -1.18
LMO3-225ENST00000541295 FBXW7Q969H0 707 aa7.7□□□□□ -1.18
LMO3-225ENST00000541295 MTA3Q9BTC8 594 aa7.7□□□□□ -1.18
LMO3-225ENST00000541295 GOLGA6AQ9NYA3 693 aa7.7□□□□□ -1.18
LMO3-225ENST00000541295 PLEKHH2Q8IVE3 1493 aa7.7□□□□□ -1.18
LMO3-225ENST00000541295 ANKRD30BQ9BXX2 1392 aa7.7□□□□□ -1.18
LMO3-225ENST00000541295 FANCAO15360 1455 aa7.69□□□□□ -1.18
LMO3-225ENST00000541295 CXorf38Q8TB03 319 aa7.69□□□□□ -1.18
LMO3-225ENST00000541295 PPME1Q9Y570 386 aa7.69□□□□□ -1.18
LMO3-225ENST00000541295 CEP83Q9Y592 693 aa7.69□□□□□ -1.18
LMO3-225ENST00000541295 NUB1Q9Y5A7 615 aa7.69□□□□□ -1.18
LMO3-225ENST00000541295 TMX4Q9H1E5 349 aaPredicted RBP7.69□□□□□ -1.18
LMO3-225ENST00000541295 FEZ2Q9UHY8 353 aaPredicted RBP7.69□□□□□ -1.18
LMO3-225ENST00000541295 KIAA1107Q9UPP5 1409 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms