RNA–Protein interactions for RNA: ENST00000541249.5

SCNN1A-216, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 5

Gene SCNN1A, Length 432 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-216ENST00000541249 HRCP23327 699 aa16.41■□□□□ 0.22
SCNN1A-216ENST00000541249 SPHKAPQ2M3C7 1700 aa16.41■□□□□ 0.22
SCNN1A-216ENST00000541249 RALGAPBQ86X10 1494 aa16.41■□□□□ 0.22
SCNN1A-216ENST00000541249 GLI3P10071 1580 aa16.4■□□□□ 0.22
SCNN1A-216ENST00000541249 PSDA5PKW4 1024 aaPredicted RBP16.4■□□□□ 0.22
SCNN1A-216ENST00000541249 UNC5CLQ8IV45 518 aa16.37■□□□□ 0.21
SCNN1A-216ENST00000541249 ZNF326Q5BKZ1 582 aaKnown RBP16.36■□□□□ 0.21
SCNN1A-216ENST00000541249 NPHP3Q7Z494 1330 aa16.36■□□□□ 0.21
SCNN1A-216ENST00000541249 SEPT12Q8IYM1 358 aa16.35■□□□□ 0.21
SCNN1A-216ENST00000541249 SLIT2O94813 1529 aa16.35■□□□□ 0.21
SCNN1A-216ENST00000541249 PPP4R3CPQ6ZMV5 832 aa16.34■□□□□ 0.21
SCNN1A-216ENST00000541249 PXDNQ92626 1479 aa16.34■□□□□ 0.21
SCNN1A-216ENST00000541249 BAG6P46379 1132 aa16.33■□□□□ 0.2
SCNN1A-216ENST00000541249 APLP2Q06481 763 aa16.32■□□□□ 0.2
SCNN1A-216ENST00000541249 ROBO2Q9HCK4 1378 aa16.32■□□□□ 0.2
SCNN1A-216ENST00000541249 YY1P25490 414 aa16.31■□□□□ 0.2
SCNN1A-216ENST00000541249 FAM50AQ14320 339 aaKnown RBP16.31■□□□□ 0.2
SCNN1A-216ENST00000541249 ESCO1Q5FWF5 840 aa16.31■□□□□ 0.2
SCNN1A-216ENST00000541249 KRT27Q7Z3Y8 459 aa16.31■□□□□ 0.2
SCNN1A-216ENST00000541249 XPCQ01831 940 aaPredicted RBP16.3■□□□□ 0.2
SCNN1A-216ENST00000541249 NEXMIFQ5QGS0 1516 aa16.29■□□□□ 0.2
SCNN1A-216ENST00000541249 FOXO3O43524 673 aa16.29■□□□□ 0.2
SCNN1A-216ENST00000541249 NUP155O75694 1391 aa16.28■□□□□ 0.2
SCNN1A-216ENST00000541249 VPS72Q15906 364 aa16.28■□□□□ 0.2
SCNN1A-216ENST00000541249 HFM1A2PYH4 1435 aa16.28■□□□□ 0.2
SCNN1A-216ENST00000541249 PRAG1Q86YV5 1406 aa16.28■□□□□ 0.2
SCNN1A-216ENST00000541249 LRPPRCP42704 1394 aaKnown RBP16.27■□□□□ 0.2
SCNN1A-216ENST00000541249 ONECUT3O60422 494 aaPredicted RBP16.27■□□□□ 0.2
SCNN1A-216ENST00000541249 R3HDM1Q15032 1099 aaKnown RBP16.27■□□□□ 0.2
SCNN1A-216ENST00000541249 USP32Q8NFA0 1604 aa16.27■□□□□ 0.19
SCNN1A-216ENST00000541249 CDC42BPGQ6DT37 1551 aa16.26■□□□□ 0.19
SCNN1A-216ENST00000541249 CCDC9Q9Y3X0 531 aaKnown RBP16.25■□□□□ 0.19
SCNN1A-216ENST00000541249 EN1Q05925 392 aaPredicted RBP16.24■□□□□ 0.19
SCNN1A-216ENST00000541249 NWD2Q9ULI1 1742 aa16.23■□□□□ 0.19
SCNN1A-216ENST00000541249 RGPD1P0DJD0 1748 aa16.22■□□□□ 0.19
SCNN1A-216ENST00000541249 SPATA31A3Q5VYP0 1347 aa16.22■□□□□ 0.19
SCNN1A-216ENST00000541249 PLCH1Q4KWH8 1693 aa16.22■□□□□ 0.19
SCNN1A-216ENST00000541249 MSH5O43196 834 aa16.22■□□□□ 0.19
SCNN1A-216ENST00000541249 A0A0G2JS52 829 aa16.21■□□□□ 0.19
SCNN1A-216ENST00000541249 HAP1P54257 671 aaPredicted RBP16.21■□□□□ 0.19
SCNN1A-216ENST00000541249 MYT1Q01538 1121 aa16.21■□□□□ 0.19
SCNN1A-216ENST00000541249 CLTCL1P53675 1640 aa16.2■□□□□ 0.18
SCNN1A-216ENST00000541249 ROCK1Q13464 1354 aa16.2■□□□□ 0.18
SCNN1A-216ENST00000541249 VGFO15240 615 aaPredicted RBP16.19■□□□□ 0.18
SCNN1A-216ENST00000541249 KIF1BO60333 1816 aa16.19■□□□□ 0.18
SCNN1A-216ENST00000541249 LOC105371045A0A1W2PR82 267 aa16.18■□□□□ 0.18
SCNN1A-216ENST00000541249 NUTM2FA1L443 756 aa16.18■□□□□ 0.18
SCNN1A-216ENST00000541249 CCDC144AA2RUR9 1427 aa16.18■□□□□ 0.18
SCNN1A-216ENST00000541249 DISP2A7MBM2 1401 aa16.18■□□□□ 0.18
SCNN1A-216ENST00000541249 NAIPQ13075 1403 aa16.17■□□□□ 0.18
SCNN1A-216ENST00000541249 KIF1AQ12756 1690 aa16.16■□□□□ 0.18
SCNN1A-216ENST00000541249 FAM98CQ17RN3 349 aaKnown RBP16.16■□□□□ 0.18
SCNN1A-216ENST00000541249 TNS1Q9HBL0 1735 aaKnown RBP16.16■□□□□ 0.18
SCNN1A-216ENST00000541249 EZH2Q15910 746 aaKnown RBP16.15■□□□□ 0.18
SCNN1A-216ENST00000541249 KRT28Q7Z3Y7 464 aa16.15■□□□□ 0.18
SCNN1A-216ENST00000541249 CABLES1Q8TDN4 633 aa16.15■□□□□ 0.18
SCNN1A-216ENST00000541249 TNS3Q68CZ2 1445 aa16.14■□□□□ 0.17
SCNN1A-216ENST00000541249 DCAF8L1A6NGE4 600 aa16.13■□□□□ 0.17
SCNN1A-216ENST00000541249 PLEKHG5O94827 1062 aa16.13■□□□□ 0.17
SCNN1A-216ENST00000541249 FAM182BQ5T319 152 aa16.13■□□□□ 0.17
SCNN1A-216ENST00000541249 ABCA3Q99758 1704 aa16.13■□□□□ 0.17
SCNN1A-216ENST00000541249 NRAPQ86VF7 1730 aa16.12■□□□□ 0.17
SCNN1A-216ENST00000541249 FAM83GA6ND36 823 aa16.11■□□□□ 0.17
SCNN1A-216ENST00000541249 ADGRB2O60241 1585 aa16.11■□□□□ 0.17
SCNN1A-216ENST00000541249 FMN2Q9NZ56 1722 aa16.11■□□□□ 0.17
SCNN1A-216ENST00000541249 PSME1Q06323 249 aa16.1■□□□□ 0.17
SCNN1A-216ENST00000541249 WAPLQ7Z5K2 1190 aa16.1■□□□□ 0.17
SCNN1A-216ENST00000541249 CAMKK2Q96RR4 588 aa16.1■□□□□ 0.17
SCNN1A-216ENST00000541249 RPGRIP1LQ68CZ1 1315 aa16.1■□□□□ 0.17
SCNN1A-216ENST00000541249 PPP1R1BQ9UD71 204 aaPredicted RBP16.09■□□□□ 0.17
SCNN1A-216ENST00000541249 LMOD2Q6P5Q4 547 aa16.08■□□□□ 0.16
SCNN1A-216ENST00000541249 BTG4Q9NY30 223 aa16.08■□□□□ 0.16
SCNN1A-216ENST00000541249 SBNO1A3KN83 1393 aa16.08■□□□□ 0.16
SCNN1A-216ENST00000541249 ARHGEF10O15013 1369 aa16.08■□□□□ 0.16
SCNN1A-216ENST00000541249 PARD3Q8TEW0 1356 aa16.08■□□□□ 0.16
SCNN1A-216ENST00000541249 TECPR2O15040 1411 aa16.08■□□□□ 0.16
SCNN1A-216ENST00000541249 PPLO60437 1756 aa16.08■□□□□ 0.16
SCNN1A-216ENST00000541249 NCBP3Q53F19 620 aaKnown RBP16.07■□□□□ 0.16
SCNN1A-216ENST00000541249 IFFO2Q5TF58 517 aa16.07■□□□□ 0.16
SCNN1A-216ENST00000541249 NINLQ9Y2I6 1382 aa16.07■□□□□ 0.16
SCNN1A-216ENST00000541249 THSD7AQ9UPZ6 1657 aa16.06■□□□□ 0.16
SCNN1A-216ENST00000541249 STK26Q9P289 416 aa16.06■□□□□ 0.16
SCNN1A-216ENST00000541249 PHF8Q9UPP1 1060 aa16.06■□□□□ 0.16
SCNN1A-216ENST00000541249 SPATA31A5Q5VU36 1347 aa16.05■□□□□ 0.16
SCNN1A-216ENST00000541249 SPATA31A7Q8IWB4 1347 aa16.05■□□□□ 0.16
SCNN1A-216ENST00000541249 TRIM37O94972 964 aa16.05■□□□□ 0.16
SCNN1A-216ENST00000541249 PLEKHH1Q9ULM0 1364 aa16.04■□□□□ 0.16
SCNN1A-216ENST00000541249 APBA3O96018 575 aa16.04■□□□□ 0.16
SCNN1A-216ENST00000541249 FAM196AQ6ZSG2 479 aa16.04■□□□□ 0.16
SCNN1A-216ENST00000541249 SPON1Q9HCB6 807 aa16.04■□□□□ 0.16
SCNN1A-216ENST00000541249 RGPD8O14715 1765 aaPredicted RBP16.04■□□□□ 0.16
SCNN1A-216ENST00000541249 COL14A1Q05707 1796 aaKnown RBP16.04■□□□□ 0.16
SCNN1A-216ENST00000541249 RREB1Q92766 1687 aa16.04■□□□□ 0.16
SCNN1A-216ENST00000541249 NUP188Q5SRE5 1749 aa16.03■□□□□ 0.16
SCNN1A-216ENST00000541249 SENP3-EIF4A1A0A087X0R7 540 aa16.03■□□□□ 0.16
SCNN1A-216ENST00000541249 ITGAEP38570 1179 aa16.03■□□□□ 0.16
SCNN1A-216ENST00000541249 NBPF8Q3BBV2 869 aa16.03■□□□□ 0.16
SCNN1A-216ENST00000541249 NBPF14Q5TI25 921 aa16.03■□□□□ 0.16
SCNN1A-216ENST00000541249 NRXN1Q9ULB1 1477 aa16.03■□□□□ 0.16
SCNN1A-216ENST00000541249 KNDC1Q76NI1 1749 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms