RNA–Protein interactions for RNA: ENST00000540848.5

LMO3-224, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LMO3, Length 1,574 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-224ENST00000540848 TET3O43151 1660 aa14.06□□□□□ -0.16
LMO3-224ENST00000540848 ZNF710Q8N1W2 664 aa14.05□□□□□ -0.16
LMO3-224ENST00000540848 KANK1Q14678 1352 aa14.05□□□□□ -0.16
LMO3-224ENST00000540848 SCAPERQ9BY12 1400 aa14.05□□□□□ -0.16
LMO3-224ENST00000540848 VWDEQ8N2E2 1590 aa14.05□□□□□ -0.16
LMO3-224ENST00000540848 KIF3CO14782 793 aa14.05□□□□□ -0.16
LMO3-224ENST00000540848 PRAG1Q86YV5 1406 aa14.04□□□□□ -0.16
LMO3-224ENST00000540848 NEURL4Q96JN8 1562 aa14.04□□□□□ -0.16
LMO3-224ENST00000540848 TRPM1Q7Z4N2 1603 aa14.03□□□□□ -0.16
LMO3-224ENST00000540848 TRPM2O94759 1503 aa14.03□□□□□ -0.16
LMO3-224ENST00000540848 PRDM15P57071 1507 aaPredicted RBP14.03□□□□□ -0.16
LMO3-224ENST00000540848 DHX29Q7Z478 1369 aaKnown RBP14.03□□□□□ -0.16
LMO3-224ENST00000540848 KIF7Q2M1P5 1343 aa14.02□□□□□ -0.16
LMO3-224ENST00000540848 AFAP1Q8N556 730 aa14.02□□□□□ -0.16
LMO3-224ENST00000540848 PTPRTO14522 1441 aa14.02□□□□□ -0.17
LMO3-224ENST00000540848 GPRASP1Q5JY77 1395 aa14.01□□□□□ -0.17
LMO3-224ENST00000540848 C2orf72A6NCS6 295 aa14.01□□□□□ -0.17
LMO3-224ENST00000540848 GPR153Q6NV75 609 aa14.01□□□□□ -0.17
LMO3-224ENST00000540848 DCAF11Q8TEB1 546 aa14.01□□□□□ -0.17
LMO3-224ENST00000540848 KRTAP3-3Q9BYR6 98 aa14.01□□□□□ -0.17
LMO3-224ENST00000540848 KRTAP3-2Q9BYR7 98 aa14.01□□□□□ -0.17
LMO3-224ENST00000540848 E9PCH4 1651 aa14.01□□□□□ -0.17
LMO3-224ENST00000540848 NEO1Q92859 1461 aa14.01□□□□□ -0.17
LMO3-224ENST00000540848 CD109Q6YHK3 1445 aa14.01□□□□□ -0.17
LMO3-224ENST00000540848 SPHKAPQ2M3C7 1700 aa14.01□□□□□ -0.17
LMO3-224ENST00000540848 CARD11Q9BXL7 1154 aa14□□□□□ -0.17
LMO3-224ENST00000540848 A2MP01023 1474 aa14□□□□□ -0.17
LMO3-224ENST00000540848 CHGAP10645 457 aaKnown RBP14□□□□□ -0.17
LMO3-224ENST00000540848 MLH3Q9UHC1 1453 aa14□□□□□ -0.17
LMO3-224ENST00000540848 KIDINS220Q9ULH0 1771 aa13.99□□□□□ -0.17
LMO3-224ENST00000540848 CEP152O94986 1710 aa13.99□□□□□ -0.17
LMO3-224ENST00000540848 ZNF326Q5BKZ1 582 aaKnown RBP13.99□□□□□ -0.17
LMO3-224ENST00000540848 POGZQ7Z3K3 1410 aa13.99□□□□□ -0.17
LMO3-224ENST00000540848 BCORL1Q5H9F3 1711 aa13.98□□□□□ -0.17
LMO3-224ENST00000540848 LMTK2Q8IWU2 1503 aa13.98□□□□□ -0.17
LMO3-224ENST00000540848 C11orf95C9JLR9 678 aaPredicted RBP13.98□□□□□ -0.17
LMO3-224ENST00000540848 NKX1-1Q15270 411 aaPredicted RBP13.98□□□□□ -0.17
LMO3-224ENST00000540848 RNF17Q9BXT8 1623 aaKnown RBP13.98□□□□□ -0.17
LMO3-224ENST00000540848 HECW2Q9P2P5 1572 aa13.97□□□□□ -0.17
LMO3-224ENST00000540848 RIMBP2O15034 1052 aa13.96□□□□□ -0.17
LMO3-224ENST00000540848 ZSWIM6Q9HCJ5 1215 aa13.96□□□□□ -0.17
LMO3-224ENST00000540848 SPNS2Q8IVW8 549 aa13.96□□□□□ -0.18
LMO3-224ENST00000540848 PRKRIP1Q9H875 184 aaPredicted RBP13.96□□□□□ -0.18
LMO3-224ENST00000540848 MROH1Q8NDA8 1641 aa13.95□□□□□ -0.18
LMO3-224ENST00000540848 KDM2AQ9Y2K7 1162 aa13.95□□□□□ -0.18
LMO3-224ENST00000540848 KTN1Q86UP2 1357 aaKnown RBP13.95□□□□□ -0.18
LMO3-224ENST00000540848 DNAJC5Q9H3Z4 198 aa13.94□□□□□ -0.18
LMO3-224ENST00000540848 GLI2P10070 1586 aa13.94□□□□□ -0.18
LMO3-224ENST00000540848 EFCAB6Q5THR3 1501 aa13.94□□□□□ -0.18
LMO3-224ENST00000540848 KHSRPQ92945 711 aaKnown RBP eCLIP13.93□□□□□ -0.18
LMO3-224ENST00000540848 ARSIQ5FYB1 569 aa13.92□□□□□ -0.18
LMO3-224ENST00000540848 ERBB3P21860 1342 aa13.92□□□□□ -0.18
LMO3-224ENST00000540848 CLTCL1P53675 1640 aa13.92□□□□□ -0.18
LMO3-224ENST00000540848 KIF3BO15066 747 aa13.92□□□□□ -0.18
LMO3-224ENST00000540848 MYT1LQ9UL68 1186 aa13.92□□□□□ -0.18
LMO3-224ENST00000540848 KIAA1210Q9ULL0 1709 aa13.91□□□□□ -0.18
LMO3-224ENST00000540848 MADDQ8WXG6 1647 aa13.91□□□□□ -0.18
LMO3-224ENST00000540848 MAP3K4Q9Y6R4 1608 aa13.91□□□□□ -0.18
LMO3-224ENST00000540848 RGL3Q3MIN7 710 aa13.9□□□□□ -0.18
LMO3-224ENST00000540848 ST20-MTHFSA0A0A6YYL1 179 aa13.89□□□□□ -0.19
LMO3-224ENST00000540848 VARS2Q5ST30 1063 aaKnown RBP13.89□□□□□ -0.19
LMO3-224ENST00000540848 KIF1BO60333 1816 aa13.88□□□□□ -0.19
LMO3-224ENST00000540848 MYOM2P54296 1465 aa13.88□□□□□ -0.19
LMO3-224ENST00000540848 COL17A1Q9UMD9 1497 aaPredicted RBP13.88□□□□□ -0.19
LMO3-224ENST00000540848 MMRN1Q13201 1228 aa13.88□□□□□ -0.19
LMO3-224ENST00000540848 PPRC1Q5VV67 1664 aaKnown RBP13.87□□□□□ -0.19
LMO3-224ENST00000540848 SLC24A1O60721 1099 aa13.87□□□□□ -0.19
LMO3-224ENST00000540848 FRMPD1Q5SYB0 1578 aa13.87□□□□□ -0.19
LMO3-224ENST00000540848 ABCA6Q8N139 1617 aa13.86□□□□□ -0.19
LMO3-224ENST00000540848 IQGAP1P46940 1657 aa13.86□□□□□ -0.19
LMO3-224ENST00000540848 RICTORQ6R327 1708 aa13.85□□□□□ -0.19
LMO3-224ENST00000540848 TMC2Q8TDI7 906 aa13.85□□□□□ -0.19
LMO3-224ENST00000540848 WASHC2CQ9Y4E1 1318 aa13.85□□□□□ -0.19
LMO3-224ENST00000540848 ZC3H13Q5T200 1668 aaKnown RBP13.85□□□□□ -0.19
LMO3-224ENST00000540848 MRS2Q9HD23 443 aa13.83□□□□□ -0.19
LMO3-224ENST00000540848 EIF3AQ14152 1382 aaKnown RBP13.83□□□□□ -0.19
LMO3-224ENST00000540848 RIMBP3CA6NJZ7 1639 aa13.83□□□□□ -0.19
LMO3-224ENST00000540848 RIMBP3BA6NNM3 1639 aa13.83□□□□□ -0.19
LMO3-224ENST00000540848 RIMBP3Q9UFD9 1639 aa13.83□□□□□ -0.19
LMO3-224ENST00000540848 IFT172Q9UG01 1749 aa13.83□□□□□ -0.2
LMO3-224ENST00000540848 DIP2CQ9Y2E4 1556 aa13.83□□□□□ -0.2
LMO3-224ENST00000540848 SCAF11Q99590 1463 aaKnown RBP13.83□□□□□ -0.2
LMO3-224ENST00000540848 RALBP1Q15311 655 aa13.83□□□□□ -0.2
LMO3-224ENST00000540848 NBPF1Q3BBV0 1214 aa13.83□□□□□ -0.2
LMO3-224ENST00000540848 ZMYM4Q5VZL5 1548 aa13.82□□□□□ -0.2
LMO3-224ENST00000540848 SLC34A2O95436 690 aa13.82□□□□□ -0.2
LMO3-224ENST00000540848 TMF1P82094 1093 aa13.82□□□□□ -0.2
LMO3-224ENST00000540848 ABCC3O15438 1527 aa13.81□□□□□ -0.2
LMO3-224ENST00000540848 ADGRB3O60242 1522 aa13.81□□□□□ -0.2
LMO3-224ENST00000540848 HNRNPUQ00839 825 aaKnown RBP eCLIP13.81□□□□□ -0.2
LMO3-224ENST00000540848 CDCA8Q53HL2 280 aa13.81□□□□□ -0.2
LMO3-224ENST00000540848 TESK2Q96S53 571 aa13.8□□□□□ -0.2
LMO3-224ENST00000540848 SUPT16HQ9Y5B9 1047 aaKnown RBP13.8□□□□□ -0.2
LMO3-224ENST00000540848 NRXN1Q9ULB1 1477 aa13.8□□□□□ -0.2
LMO3-224ENST00000540848 ARHGAP31Q2M1Z3 1444 aa13.8□□□□□ -0.2
LMO3-224ENST00000540848 CAMSAP1Q5T5Y3 1602 aa13.8□□□□□ -0.2
LMO3-224ENST00000540848 NEFLP07196 543 aa13.79□□□□□ -0.2
LMO3-224ENST00000540848 POLR3GLQ9BT43 218 aa13.79□□□□□ -0.2
LMO3-224ENST00000540848 NPATQ14207 1427 aa13.79□□□□□ -0.2
LMO3-224ENST00000540848 BRD4O60885 1362 aaPredicted RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms