RNA–Protein interactions for RNA: ENST00000540590.1

LMO3-223, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 565 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-223ENST00000540590 CENPJQ9HC77 1338 aaPredicted RBP17.5■□□□□ 0.39
LMO3-223ENST00000540590 SBNO2Q9Y2G9 1366 aa17.5■□□□□ 0.39
LMO3-223ENST00000540590 C11orf95C9JLR9 678 aaPredicted RBP17.48■□□□□ 0.39
LMO3-223ENST00000540590 SIRT1Q96EB6 747 aa17.48■□□□□ 0.39
LMO3-223ENST00000540590 FAM135BQ49AJ0 1406 aa17.47■□□□□ 0.39
LMO3-223ENST00000540590 NWD1Q149M9 1564 aa17.46■□□□□ 0.39
LMO3-223ENST00000540590 PRAM1Q96QH2 718 aa17.46■□□□□ 0.39
LMO3-223ENST00000540590 AMOTL2Q9Y2J4 779 aa17.46■□□□□ 0.39
LMO3-223ENST00000540590 CCDC7Q96M83 1385 aa17.45■□□□□ 0.38
LMO3-223ENST00000540590 ROBO2Q9HCK4 1378 aa17.45■□□□□ 0.38
LMO3-223ENST00000540590 DISP3Q9P2K9 1392 aa17.45■□□□□ 0.38
LMO3-223ENST00000540590 PLEKHH1Q9ULM0 1364 aa17.45■□□□□ 0.38
LMO3-223ENST00000540590 PTCH1Q13635 1447 aa17.45■□□□□ 0.38
LMO3-223ENST00000540590 WASHC2AQ641Q2 1341 aa17.45■□□□□ 0.38
LMO3-223ENST00000540590 POGKQ9P215 609 aa17.44■□□□□ 0.38
LMO3-223ENST00000540590 KIF7Q2M1P5 1343 aa17.44■□□□□ 0.38
LMO3-223ENST00000540590 SAFB2Q14151 953 aaKnown RBP eCLIP17.43■□□□□ 0.38
LMO3-223ENST00000540590 WAPLQ7Z5K2 1190 aa17.43■□□□□ 0.38
LMO3-223ENST00000540590 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.43■□□□□ 0.38
LMO3-223ENST00000540590 STRCP1A6NGW2 1772 aa17.43■□□□□ 0.38
LMO3-223ENST00000540590 TULP4Q9NRJ4 1543 aa17.42■□□□□ 0.38
LMO3-223ENST00000540590 CAPN15O75808 1086 aa17.42■□□□□ 0.38
LMO3-223ENST00000540590 KCNA6P17658 529 aa17.42■□□□□ 0.38
LMO3-223ENST00000540590 TMF1P82094 1093 aa17.42■□□□□ 0.38
LMO3-223ENST00000540590 MINK1Q8N4C8 1332 aaPredicted RBP17.4■□□□□ 0.38
LMO3-223ENST00000540590 NKTRP30414 1462 aaKnown RBP17.39■□□□□ 0.37
LMO3-223ENST00000540590 CDCA8Q53HL2 280 aa17.39■□□□□ 0.37
LMO3-223ENST00000540590 ADGRB2O60241 1585 aa17.39■□□□□ 0.37
LMO3-223ENST00000540590 MYOM1P52179 1685 aa17.38■□□□□ 0.37
LMO3-223ENST00000540590 PUS7Q96PZ0 661 aaKnown RBP17.37■□□□□ 0.37
LMO3-223ENST00000540590 POLR3GLQ9BT43 218 aa17.37■□□□□ 0.37
LMO3-223ENST00000540590 NALCNQ8IZF0 1738 aa17.37■□□□□ 0.37
LMO3-223ENST00000540590 SPINK5Q9NQ38 1064 aaPredicted RBP17.36■□□□□ 0.37
LMO3-223ENST00000540590 EVC2Q86UK5 1308 aa17.36■□□□□ 0.37
LMO3-223ENST00000540590 DSG3P32926 999 aa17.35■□□□□ 0.37
LMO3-223ENST00000540590 DDX10Q13206 875 aaKnown RBP17.35■□□□□ 0.37
LMO3-223ENST00000540590 NCOA3Q9Y6Q9 1424 aa17.34■□□□□ 0.37
LMO3-223ENST00000540590 XIRP1Q702N8 1843 aaKnown RBP17.32■□□□□ 0.36
LMO3-223ENST00000540590 FMN2Q9NZ56 1722 aa17.3■□□□□ 0.36
LMO3-223ENST00000540590 WASLO00401 505 aaPredicted RBP17.3■□□□□ 0.36
LMO3-223ENST00000540590 PROSER2Q86WR7 435 aaPredicted RBP17.3■□□□□ 0.36
LMO3-223ENST00000540590 CDK19Q9BWU1 502 aa17.3■□□□□ 0.36
LMO3-223ENST00000540590 CABP2Q9NPB3 220 aa17.3■□□□□ 0.36
LMO3-223ENST00000540590 CDC42BPGQ6DT37 1551 aa17.3■□□□□ 0.36
LMO3-223ENST00000540590 ADGRL3Q9HAR2 1447 aa17.3■□□□□ 0.36
LMO3-223ENST00000540590 ZNF335Q9H4Z2 1342 aaPredicted RBP17.29■□□□□ 0.36
LMO3-223ENST00000540590 SRPK2P78362 688 aaKnown RBP17.29■□□□□ 0.36
LMO3-223ENST00000540590 DIEXFQ68CQ4 756 aaKnown RBP17.29■□□□□ 0.36
LMO3-223ENST00000540590 RBM33Q96EV2 1170 aaKnown RBP17.29■□□□□ 0.36
LMO3-223ENST00000540590 NINLQ9Y2I6 1382 aa17.28■□□□□ 0.36
LMO3-223ENST00000540590 USP32Q8NFA0 1604 aa17.28■□□□□ 0.36
LMO3-223ENST00000540590 RGPD8O14715 1765 aaPredicted RBP17.28■□□□□ 0.36
LMO3-223ENST00000540590 TOPAZ1Q8N9V7 1692 aa17.27■□□□□ 0.36
LMO3-223ENST00000540590 ATAD2Q6PL18 1390 aa17.27■□□□□ 0.35
LMO3-223ENST00000540590 ATP7BP35670 1465 aa17.26■□□□□ 0.35
LMO3-223ENST00000540590 TMEM94Q12767 1356 aa17.26■□□□□ 0.35
LMO3-223ENST00000540590 LRRC7Q96NW7 1537 aa17.26■□□□□ 0.35
LMO3-223ENST00000540590 ITSN1Q15811 1721 aa17.25■□□□□ 0.35
LMO3-223ENST00000540590 DCCP43146 1447 aa17.24■□□□□ 0.35
LMO3-223ENST00000540590 PRR36Q9H6K5 1346 aa17.23■□□□□ 0.35
LMO3-223ENST00000540590 C14orf37Q86TY3 774 aa17.22■□□□□ 0.35
LMO3-223ENST00000540590 TMC1Q8TDI8 760 aa17.22■□□□□ 0.35
LMO3-223ENST00000540590 NUDT16Q96DE0 195 aaKnown RBP17.22■□□□□ 0.35
LMO3-223ENST00000540590 SLC12A5Q9H2X9 1139 aa17.22■□□□□ 0.35
LMO3-223ENST00000540590 ANKARQ7Z5J8 1434 aa17.21■□□□□ 0.35
LMO3-223ENST00000540590 PANK3Q9H999 370 aa17.21■□□□□ 0.35
LMO3-223ENST00000540590 LTBP4Q8N2S1 1624 aa17.21■□□□□ 0.35
LMO3-223ENST00000540590 AKAP12Q02952 1782 aa17.2■□□□□ 0.34
LMO3-223ENST00000540590 NUTM2FA1L443 756 aa17.2■□□□□ 0.34
LMO3-223ENST00000540590 POTEHQ6S545 545 aa17.2■□□□□ 0.34
LMO3-223ENST00000540590 PPIP5K1Q6PFW1 1433 aa17.2■□□□□ 0.34
LMO3-223ENST00000540590 CD163L1Q9NR16 1453 aa17.19■□□□□ 0.34
LMO3-223ENST00000540590 ANKRD36BQ8N2N9 1353 aa17.18■□□□□ 0.34
LMO3-223ENST00000540590 C19orf44Q9H6X5 657 aa17.18■□□□□ 0.34
LMO3-223ENST00000540590 CABP1Q9NZU7 370 aa17.18■□□□□ 0.34
LMO3-223ENST00000540590 CCDC61Q9Y6R9 512 aa17.18■□□□□ 0.34
LMO3-223ENST00000540590 PER1O15534 1290 aaPredicted RBP17.17■□□□□ 0.34
LMO3-223ENST00000540590 MON2Q7Z3U7 1717 aa17.17■□□□□ 0.34
LMO3-223ENST00000540590 MSH6P52701 1360 aa17.16■□□□□ 0.34
LMO3-223ENST00000540590 A0A1W2PP64 1363 aa17.15■□□□□ 0.34
LMO3-223ENST00000540590 KCNA4P22459 653 aa17.15■□□□□ 0.34
LMO3-223ENST00000540590 CARD14Q9BXL6 1004 aa17.15■□□□□ 0.34
LMO3-223ENST00000540590 CPSF1Q10570 1443 aaKnown RBP17.14■□□□□ 0.33
LMO3-223ENST00000540590 TERF2IPQ9NYB0 399 aa17.14■□□□□ 0.33
LMO3-223ENST00000540590 MST1RQ04912 1400 aa17.13■□□□□ 0.33
LMO3-223ENST00000540590 NSD3Q9BZ95 1437 aa17.13■□□□□ 0.33
LMO3-223ENST00000540590 PLEKHG3A1L390 1219 aa17.13■□□□□ 0.33
LMO3-223ENST00000540590 ATF3P18847 181 aa17.12■□□□□ 0.33
LMO3-223ENST00000540590 HDGFL2Q7Z4V5 671 aaPredicted RBP17.12■□□□□ 0.33
LMO3-223ENST00000540590 KIF20BQ96Q89 1820 aa17.12■□□□□ 0.33
LMO3-223ENST00000540590 C1orf167Q5SNV9 1468 aa17.12■□□□□ 0.33
LMO3-223ENST00000540590 NRKQ7Z2Y5 1582 aa17.11■□□□□ 0.33
LMO3-223ENST00000540590 KIF1AQ12756 1690 aa17.11■□□□□ 0.33
LMO3-223ENST00000540590 CADPS2Q86UW7 1296 aa17.11■□□□□ 0.33
LMO3-223ENST00000540590 KNSTRNQ9Y448 316 aa17.11■□□□□ 0.33
LMO3-223ENST00000540590 IQSEC2Q5JU85 1478 aa17.11■□□□□ 0.33
LMO3-223ENST00000540590 ANP32CO43423 234 aa17.1■□□□□ 0.33
LMO3-223ENST00000540590 MIER1Q8N108 512 aa17.1■□□□□ 0.33
LMO3-223ENST00000540590 PMFBP1Q8TBY8 1022 aa17.1■□□□□ 0.33
LMO3-223ENST00000540590 ACEP12821 1306 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms