RNA–Protein interactions for RNA: ENST00000540326.5

NEK6-213, Transcript of NIMA related kinase 6, humanhuman

TSL 1 (best) BASIC

Gene NEK6, Length 2,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-213ENST00000540326 C14orf93Q9H972 538 aaKnown RBP16.1■□□□□ 0.17
NEK6-213ENST00000540326 NPATQ14207 1427 aa16.1■□□□□ 0.17
NEK6-213ENST00000540326 NGEFQ8N5V2 710 aa16.09■□□□□ 0.17
NEK6-213ENST00000540326 TCP11L2Q8N4U5 519 aa16.08■□□□□ 0.17
NEK6-213ENST00000540326 LMTK2Q8IWU2 1503 aa16.08■□□□□ 0.16
NEK6-213ENST00000540326 MTHFSP49914 203 aa16.07■□□□□ 0.16
NEK6-213ENST00000540326 PDE3AQ14432 1141 aa16.07■□□□□ 0.16
NEK6-213ENST00000540326 SENP3Q9H4L4 574 aaPredicted RBP16.07■□□□□ 0.16
NEK6-213ENST00000540326 SETBP1Q9Y6X0 1596 aa16.07■□□□□ 0.16
NEK6-213ENST00000540326 RUNDC1Q96C34 613 aa16.07■□□□□ 0.16
NEK6-213ENST00000540326 CGNL1Q0VF96 1302 aa16.07■□□□□ 0.16
NEK6-213ENST00000540326 SHPRHQ149N8 1683 aa16.06■□□□□ 0.16
NEK6-213ENST00000540326 QRICH2Q9H0J4 1663 aa16.06■□□□□ 0.16
NEK6-213ENST00000540326 CLUAP1Q96AJ1 413 aa16.06■□□□□ 0.16
NEK6-213ENST00000540326 ADGRB1O14514 1584 aa16.05■□□□□ 0.16
NEK6-213ENST00000540326 PPLO60437 1756 aa16.05■□□□□ 0.16
NEK6-213ENST00000540326 BCL2L13Q9BXK5 485 aa16.05■□□□□ 0.16
NEK6-213ENST00000540326 NFKBIBQ15653 356 aa16.04■□□□□ 0.16
NEK6-213ENST00000540326 NPM1P06748 294 aaKnown RBP eCLIP16.03■□□□□ 0.16
NEK6-213ENST00000540326 RARSP54136 660 aaKnown RBP16.03■□□□□ 0.16
NEK6-213ENST00000540326 SAFB2Q14151 953 aaKnown RBP eCLIP16.03■□□□□ 0.16
NEK6-213ENST00000540326 TNNQ9UQP3 1299 aa16.03■□□□□ 0.16
NEK6-213ENST00000540326 ZC3H13Q5T200 1668 aaKnown RBP16.03■□□□□ 0.16
NEK6-213ENST00000540326 FRMPD1Q5SYB0 1578 aa16.03■□□□□ 0.16
NEK6-213ENST00000540326 CD109Q6YHK3 1445 aa16.02■□□□□ 0.15
NEK6-213ENST00000540326 POGZQ7Z3K3 1410 aa16.01■□□□□ 0.15
NEK6-213ENST00000540326 RLBP1P12271 317 aa16.01■□□□□ 0.15
NEK6-213ENST00000540326 CFAP53Q96M91 514 aa16.01■□□□□ 0.15
NEK6-213ENST00000540326 CABP2Q9NPB3 220 aa16.01■□□□□ 0.15
NEK6-213ENST00000540326 NINLQ9Y2I6 1382 aa16.01■□□□□ 0.15
NEK6-213ENST00000540326 IQSEC2Q5JU85 1478 aa16■□□□□ 0.15
NEK6-213ENST00000540326 PHF23Q9BUL5 403 aaPredicted RBP16■□□□□ 0.15
NEK6-213ENST00000540326 U2AF1L5P0DN76 240 aaPredicted RBP16■□□□□ 0.15
NEK6-213ENST00000540326 U2AF1Q01081 240 aaKnown RBP eCLIP16■□□□□ 0.15
NEK6-213ENST00000540326 RPGRIP1LQ68CZ1 1315 aa15.99■□□□□ 0.15
NEK6-213ENST00000540326 EVC2Q86UK5 1308 aa15.99■□□□□ 0.15
NEK6-213ENST00000540326 SEC24BO95487 1268 aa15.99■□□□□ 0.15
NEK6-213ENST00000540326 RAPGEF3O95398 923 aa15.99■□□□□ 0.15
NEK6-213ENST00000540326 WDR63Q8IWG1 891 aa15.99■□□□□ 0.15
NEK6-213ENST00000540326 PCDHB15Q9Y5E8 787 aa15.98■□□□□ 0.15
NEK6-213ENST00000540326 MLH3Q9UHC1 1453 aa15.98■□□□□ 0.15
NEK6-213ENST00000540326 ABCC3O15438 1527 aa15.98■□□□□ 0.15
NEK6-213ENST00000540326 VGFO15240 615 aaPredicted RBP15.97■□□□□ 0.15
NEK6-213ENST00000540326 IL27Q8NEV9 243 aa15.97■□□□□ 0.15
NEK6-213ENST00000540326 GLI2P10070 1586 aa15.97■□□□□ 0.15
NEK6-213ENST00000540326 STK26Q9P289 416 aa15.97■□□□□ 0.15
NEK6-213ENST00000540326 USP19O94966 1318 aa15.97■□□□□ 0.15
NEK6-213ENST00000540326 MAPK8IP3Q9UPT6 1336 aa15.97■□□□□ 0.15
NEK6-213ENST00000540326 HECW2Q9P2P5 1572 aa15.97■□□□□ 0.15
NEK6-213ENST00000540326 ANKRD36BQ8N2N9 1353 aa15.96■□□□□ 0.15
NEK6-213ENST00000540326 TULP4Q9NRJ4 1543 aa15.96■□□□□ 0.15
NEK6-213ENST00000540326 SIGLEC1Q9BZZ2 1709 aa15.96■□□□□ 0.14
NEK6-213ENST00000540326 CCDC27Q2M243 656 aa15.95■□□□□ 0.14
NEK6-213ENST00000540326 USP32Q8NFA0 1604 aa15.95■□□□□ 0.14
NEK6-213ENST00000540326 GSE1Q14687 1217 aa15.94■□□□□ 0.14
NEK6-213ENST00000540326 PMFBP1Q8TBY8 1022 aa15.94■□□□□ 0.14
NEK6-213ENST00000540326 FRAT2O75474 233 aaPredicted RBP15.94■□□□□ 0.14
NEK6-213ENST00000540326 TSR2Q969E8 191 aaKnown RBP15.94■□□□□ 0.14
NEK6-213ENST00000540326 MYH16Q9H6N6 1097 aa15.94■□□□□ 0.14
NEK6-213ENST00000540326 ARHGEF28Q8N1W1 1705 aaKnown RBP15.93■□□□□ 0.14
NEK6-213ENST00000540326 U2SURPO15042 1029 aaKnown RBP15.93■□□□□ 0.14
NEK6-213ENST00000540326 SRPK2P78362 688 aaKnown RBP15.93■□□□□ 0.14
NEK6-213ENST00000540326 IDI1Q13907 227 aa15.93■□□□□ 0.14
NEK6-213ENST00000540326 GGNBP2Q9H3C7 697 aa15.93■□□□□ 0.14
NEK6-213ENST00000540326 CAMSAP1Q5T5Y3 1602 aa15.93■□□□□ 0.14
NEK6-213ENST00000540326 VIRMAQ69YN4 1812 aaKnown RBP15.93■□□□□ 0.14
NEK6-213ENST00000540326 NEXMIFQ5QGS0 1516 aa15.92■□□□□ 0.14
NEK6-213ENST00000540326 A0A1W2PP64 1363 aa15.92■□□□□ 0.14
NEK6-213ENST00000540326 RTN4Q9NQC3 1192 aaKnown RBP15.91■□□□□ 0.14
NEK6-213ENST00000540326 PDZRN3Q9UPQ7 1066 aa15.91■□□□□ 0.14
NEK6-213ENST00000540326 CFAP74Q9C0B2 1584 aa15.91■□□□□ 0.14
NEK6-213ENST00000540326 NSD2O96028 1365 aa15.91■□□□□ 0.14
NEK6-213ENST00000540326 PUS7Q96PZ0 661 aaKnown RBP15.91■□□□□ 0.14
NEK6-213ENST00000540326 FTSJ3Q8IY81 847 aaKnown RBP15.89■□□□□ 0.13
NEK6-213ENST00000540326 MINK1Q8N4C8 1332 aaPredicted RBP15.89■□□□□ 0.13
NEK6-213ENST00000540326 PIK3C2BO00750 1634 aa15.89■□□□□ 0.13
NEK6-213ENST00000540326 AAMPQ13685 434 aa15.89■□□□□ 0.13
NEK6-213ENST00000540326 MVPQ14764 893 aaKnown RBP15.89■□□□□ 0.13
NEK6-213ENST00000540326 EXOSC9Q06265 439 aaKnown RBP15.88■□□□□ 0.13
NEK6-213ENST00000540326 ZKSCAN2Q63HK3 967 aa15.88■□□□□ 0.13
NEK6-213ENST00000540326 RWDD1Q9H446 243 aaPredicted RBP15.88■□□□□ 0.13
NEK6-213ENST00000540326 ABCC11Q96J66 1382 aa15.88■□□□□ 0.13
NEK6-213ENST00000540326 DZIP1LQ8IYY4 767 aaKnown RBP15.87■□□□□ 0.13
NEK6-213ENST00000540326 SMC4Q9NTJ3 1288 aa15.87■□□□□ 0.13
NEK6-213ENST00000540326 TMPOP42166 694 aaKnown RBP15.87■□□□□ 0.13
NEK6-213ENST00000540326 PLEKHF1Q96S99 279 aa15.87■□□□□ 0.13
NEK6-213ENST00000540326 OSCARQ8IYS5 282 aa15.86■□□□□ 0.13
NEK6-213ENST00000540326 PRAM1Q96QH2 718 aa15.86■□□□□ 0.13
NEK6-213ENST00000540326 SLKQ9H2G2 1235 aaPredicted RBP15.86■□□□□ 0.13
NEK6-213ENST00000540326 TRIM35Q9UPQ4 493 aa15.86■□□□□ 0.13
NEK6-213ENST00000540326 NLRP1Q9C000 1473 aa15.86■□□□□ 0.13
NEK6-213ENST00000540326 FYB1O15117 783 aa15.86■□□□□ 0.13
NEK6-213ENST00000540326 ADGRB2O60241 1585 aa15.86■□□□□ 0.13
NEK6-213ENST00000540326 BRPF3Q9ULD4 1205 aa15.85■□□□□ 0.13
NEK6-213ENST00000540326 POGKQ9P215 609 aa15.85■□□□□ 0.13
NEK6-213ENST00000540326 TRIM27P14373 513 aa15.84■□□□□ 0.13
NEK6-213ENST00000540326 BECN1Q14457 450 aa15.84■□□□□ 0.13
NEK6-213ENST00000540326 SSH1Q8WYL5 1049 aa15.84■□□□□ 0.13
NEK6-213ENST00000540326 DIP2CQ9Y2E4 1556 aa15.84■□□□□ 0.13
NEK6-213ENST00000540326 NCBP3Q53F19 620 aaKnown RBP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms