RNA–Protein interactions for RNA: ENST00000540057.1

C2CD3-214, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 4

Gene C2CD3, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-214ENST00000540057 NECTIN2Q92692 538 aa7.25□□□□□ -1.25
C2CD3-214ENST00000540057 IRX2Q9BZI1 471 aaPredicted RBP7.25□□□□□ -1.25
C2CD3-214ENST00000540057 WRNQ14191 1432 aaPredicted RBP eCLIP7.25□□□□□ -1.25
C2CD3-214ENST00000540057 GLI2P10070 1586 aa7.25□□□□□ -1.25
C2CD3-214ENST00000540057 COPS2P61201 443 aa7.24□□□□□ -1.25
C2CD3-214ENST00000540057 NKX2-3Q8TAU0 364 aa7.24□□□□□ -1.25
C2CD3-214ENST00000540057 TOP2BQ02880 1626 aa7.23□□□□□ -1.25
C2CD3-214ENST00000540057 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.23□□□□□ -1.25
C2CD3-214ENST00000540057 ASXL2Q76L83 1435 aa7.22□□□□□ -1.25
C2CD3-214ENST00000540057 GNPATO15228 680 aa7.22□□□□□ -1.25
C2CD3-214ENST00000540057 SLC10A3P09131 477 aa7.22□□□□□ -1.25
C2CD3-214ENST00000540057 SLC4A3P48751 1232 aa7.22□□□□□ -1.25
C2CD3-214ENST00000540057 SMYD5Q6GMV2 418 aa7.22□□□□□ -1.25
C2CD3-214ENST00000540057 PPP1R18Q6NYC8 613 aa7.22□□□□□ -1.25
C2CD3-214ENST00000540057 METTL3Q86U44 580 aaKnown RBP7.22□□□□□ -1.25
C2CD3-214ENST00000540057 BLOC1S3Q6QNY0 202 aa7.21□□□□□ -1.26
C2CD3-214ENST00000540057 PLB1Q6P1J6 1458 aa7.21□□□□□ -1.26
C2CD3-214ENST00000540057 ABCC2Q92887 1545 aa7.21□□□□□ -1.26
C2CD3-214ENST00000540057 MAP3K4Q9Y6R4 1608 aa7.2□□□□□ -1.26
C2CD3-214ENST00000540057 ZPR1O75312 459 aa7.2□□□□□ -1.26
C2CD3-214ENST00000540057 OATP04181 439 aa7.2□□□□□ -1.26
C2CD3-214ENST00000540057 CFHP08603 1231 aa7.2□□□□□ -1.26
C2CD3-214ENST00000540057 PRR14Q9BWN1 585 aa7.2□□□□□ -1.26
C2CD3-214ENST00000540057 PCDHB3Q9Y5E6 796 aa7.2□□□□□ -1.26
C2CD3-214ENST00000540057 PTPRGP23470 1445 aa7.19□□□□□ -1.26
C2CD3-214ENST00000540057 ACTN4O43707 911 aaKnown RBP7.19□□□□□ -1.26
C2CD3-214ENST00000540057 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.19□□□□□ -1.26
C2CD3-214ENST00000540057 BIVM-ERCC5R4GMW8 1640 aa7.19□□□□□ -1.26
C2CD3-214ENST00000540057 CUL7Q14999 1698 aa7.19□□□□□ -1.26
C2CD3-214ENST00000540057 TEX14Q8IWB6 1497 aa7.18□□□□□ -1.26
C2CD3-214ENST00000540057 KIAA0586Q9BVV6 1533 aa7.18□□□□□ -1.26
C2CD3-214ENST00000540057 TLL1O43897 1013 aa7.18□□□□□ -1.26
C2CD3-214ENST00000540057 VSIG10Q8N0Z9 540 aa7.18□□□□□ -1.26
C2CD3-214ENST00000540057 PHOX2BQ99453 314 aa7.18□□□□□ -1.26
C2CD3-214ENST00000540057 PRKD2Q9BZL6 878 aa7.18□□□□□ -1.26
C2CD3-214ENST00000540057 DISP3Q9P2K9 1392 aa7.18□□□□□ -1.26
C2CD3-214ENST00000540057 EPRSP07814 1512 aaKnown RBP7.17□□□□□ -1.26
C2CD3-214ENST00000540057 KMT5BQ4FZB7 885 aa7.17□□□□□ -1.26
C2CD3-214ENST00000540057 GPIHBP1Q8IV16 184 aa7.17□□□□□ -1.26
C2CD3-214ENST00000540057 NLRP7Q8WX94 980 aa7.17□□□□□ -1.26
C2CD3-214ENST00000540057 TTBK1Q5TCY1 1321 aaPredicted RBP7.17□□□□□ -1.26
C2CD3-214ENST00000540057 KIF21BO75037 1637 aa7.16□□□□□ -1.26
C2CD3-214ENST00000540057 V9GY48 417 aaPredicted RBP7.15□□□□□ -1.26
C2CD3-214ENST00000540057 TNIKQ9UKE5 1360 aa7.15□□□□□ -1.26
C2CD3-214ENST00000540057 UHRF1BP1LA0JNW5 1464 aa7.15□□□□□ -1.27
C2CD3-214ENST00000540057 PTPRMP28827 1452 aa7.14□□□□□ -1.27
C2CD3-214ENST00000540057 EMID1Q96A84 441 aaPredicted RBP7.14□□□□□ -1.27
C2CD3-214ENST00000540057 ADAMTSL3P82987 1691 aa7.13□□□□□ -1.27
C2CD3-214ENST00000540057 PCF11O94913 1555 aaKnown RBP7.13□□□□□ -1.27
C2CD3-214ENST00000540057 KDM5BQ9UGL1 1544 aa7.13□□□□□ -1.27
C2CD3-214ENST00000540057 LCE2BO14633 110 aa7.13□□□□□ -1.27
C2CD3-214ENST00000540057 TMUB1Q9BVT8 246 aa7.13□□□□□ -1.27
C2CD3-214ENST00000540057 DAXXQ9UER7 740 aaPredicted RBP7.13□□□□□ -1.27
C2CD3-214ENST00000540057 UACAQ9BZF9 1416 aa7.12□□□□□ -1.27
C2CD3-214ENST00000540057 RNF223E7ERA6 249 aa7.12□□□□□ -1.27
C2CD3-214ENST00000540057 GGCXP38435 758 aa7.12□□□□□ -1.27
C2CD3-214ENST00000540057 ZCCHC11Q5TAX3 1644 aaKnown RBP7.12□□□□□ -1.27
C2CD3-214ENST00000540057 ADH1BP00325 375 aa7.11□□□□□ -1.27
C2CD3-214ENST00000540057 PUS10Q3MIT2 529 aaKnown RBP7.11□□□□□ -1.27
C2CD3-214ENST00000540057 CARMIL2Q6F5E8 1435 aa7.1□□□□□ -1.27
C2CD3-214ENST00000540057 NR1I2O75469 434 aa7.1□□□□□ -1.27
C2CD3-214ENST00000540057 S1PR4O95977 384 aa7.1□□□□□ -1.27
C2CD3-214ENST00000540057 MAGI3Q5TCQ9 1506 aa7.1□□□□□ -1.27
C2CD3-214ENST00000540057 SPATA31D1Q6ZQQ2 1576 aa7.09□□□□□ -1.27
C2CD3-214ENST00000540057 DDX11L8A8MPP1 907 aa7.09□□□□□ -1.27
C2CD3-214ENST00000540057 MAP2K5Q13163 448 aa7.09□□□□□ -1.27
C2CD3-214ENST00000540057 LAPTM4AQ15012 233 aa7.09□□□□□ -1.27
C2CD3-214ENST00000540057 Q6ZNB5 142 aa7.09□□□□□ -1.27
C2CD3-214ENST00000540057 SCUBE3Q8IX30 993 aa7.09□□□□□ -1.27
C2CD3-214ENST00000540057 RDH13Q8NBN7 331 aa7.09□□□□□ -1.27
C2CD3-214ENST00000540057 WDR7Q9Y4E6 1490 aa7.09□□□□□ -1.27
C2CD3-214ENST00000540057 CD109Q6YHK3 1445 aa7.09□□□□□ -1.28
C2CD3-214ENST00000540057 IGF1RP08069 1367 aa7.08□□□□□ -1.28
C2CD3-214ENST00000540057 PPEF1O14829 653 aaPredicted RBP7.08□□□□□ -1.28
C2CD3-214ENST00000540057 GFRA3O60609 400 aa7.08□□□□□ -1.28
C2CD3-214ENST00000540057 HSPA2P54652 639 aa7.08□□□□□ -1.28
C2CD3-214ENST00000540057 FUT2Q10981 343 aa7.08□□□□□ -1.28
C2CD3-214ENST00000540057 MORN1Q5T089 497 aa7.08□□□□□ -1.28
C2CD3-214ENST00000540057 ANKLE1Q8NAG6 615 aa7.08□□□□□ -1.28
C2CD3-214ENST00000540057 CFAP43Q8NDM7 1665 aa7.08□□□□□ -1.28
C2CD3-214ENST00000540057 DISP1Q96F81 1524 aa7.07□□□□□ -1.28
C2CD3-214ENST00000540057 NRG2O14511 850 aaPredicted RBP7.07□□□□□ -1.28
C2CD3-214ENST00000540057 PLA2G2CQ5R387 149 aa7.07□□□□□ -1.28
C2CD3-214ENST00000540057 RSPH4AQ5TD94 716 aa7.07□□□□□ -1.28
C2CD3-214ENST00000540057 MADDQ8WXG6 1647 aa7.07□□□□□ -1.28
C2CD3-214ENST00000540057 BCORL1Q5H9F3 1711 aa7.07□□□□□ -1.28
C2CD3-214ENST00000540057 GCGRP47871 477 aa7.06□□□□□ -1.28
C2CD3-214ENST00000540057 TRIM67Q6ZTA4 783 aa7.06□□□□□ -1.28
C2CD3-214ENST00000540057 SULF1Q8IWU6 871 aa7.06□□□□□ -1.28
C2CD3-214ENST00000540057 THAP11Q96EK4 314 aa7.06□□□□□ -1.28
C2CD3-214ENST00000540057 IQGAP2Q13576 1575 aa7.06□□□□□ -1.28
C2CD3-214ENST00000540057 ARAP3Q8WWN8 1544 aa7.06□□□□□ -1.28
C2CD3-214ENST00000540057 IRF6O14896 467 aa7.05□□□□□ -1.28
C2CD3-214ENST00000540057 SLC19A1P41440 591 aa7.05□□□□□ -1.28
C2CD3-214ENST00000540057 LIAT1Q6ZQX7 453 aa7.05□□□□□ -1.28
C2CD3-214ENST00000540057 SLC6A16Q9GZN6 736 aa7.05□□□□□ -1.28
C2CD3-214ENST00000540057 CD46P15529 392 aa7.04□□□□□ -1.28
C2CD3-214ENST00000540057 ATP6V1AP38606 617 aa7.04□□□□□ -1.28
C2CD3-214ENST00000540057 CCDC102AQ96A19 550 aa7.04□□□□□ -1.28
C2CD3-214ENST00000540057 SPSB2Q99619 263 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms