RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 USP32Q8NFA0 1604 aa23.07■■□□□ 1.28
LTBR-207ENST00000539925 THEMISQ8N1K5 641 aaPredicted RBP23.06■■□□□ 1.28
LTBR-207ENST00000539925 NSD2O96028 1365 aa23.06■■□□□ 1.28
LTBR-207ENST00000539925 ARHGAP23Q9P227 1491 aa23.06■■□□□ 1.28
LTBR-207ENST00000539925 PPP2R1AP30153 589 aa23.04■■□□□ 1.28
LTBR-207ENST00000539925 CARD14Q9BXL6 1004 aa23.04■■□□□ 1.28
LTBR-207ENST00000539925 CEBPAP49715 358 aaPredicted RBP23.03■■□□□ 1.28
LTBR-207ENST00000539925 KNDC1Q76NI1 1749 aa23.03■■□□□ 1.28
LTBR-207ENST00000539925 CGNL1Q0VF96 1302 aa23.03■■□□□ 1.28
LTBR-207ENST00000539925 SRPK2P78362 688 aaKnown RBP23.03■■□□□ 1.28
LTBR-207ENST00000539925 SLC12A5Q9H2X9 1139 aa23.03■■□□□ 1.28
LTBR-207ENST00000539925 NSD3Q9BZ95 1437 aa23.02■■□□□ 1.28
LTBR-207ENST00000539925 TERF2IPQ9NYB0 399 aa23.01■■□□□ 1.27
LTBR-207ENST00000539925 NEFLP07196 543 aa23■■□□□ 1.27
LTBR-207ENST00000539925 TXNDC2Q86VQ3 553 aa23■■□□□ 1.27
LTBR-207ENST00000539925 BCANQ96GW7 911 aa23■■□□□ 1.27
LTBR-207ENST00000539925 MINK1Q8N4C8 1332 aaPredicted RBP23■■□□□ 1.27
LTBR-207ENST00000539925 METP08581 1390 aa23■■□□□ 1.27
LTBR-207ENST00000539925 SAFB2Q14151 953 aaKnown RBP eCLIP23■■□□□ 1.27
LTBR-207ENST00000539925 CPS1P31327 1500 aa22.99■■□□□ 1.27
LTBR-207ENST00000539925 CABP2Q9NPB3 220 aa22.99■■□□□ 1.27
LTBR-207ENST00000539925 ADAMTS13Q76LX8 1427 aa22.99■■□□□ 1.27
LTBR-207ENST00000539925 DIP2AQ14689 1571 aa22.97■■□□□ 1.27
LTBR-207ENST00000539925 CDK19Q9BWU1 502 aa22.97■■□□□ 1.27
LTBR-207ENST00000539925 MED14O60244 1454 aa22.96■■□□□ 1.27
LTBR-207ENST00000539925 TBX22Q9Y458 520 aa22.95■■□□□ 1.26
LTBR-207ENST00000539925 LTKP29376 864 aa22.94■■□□□ 1.26
LTBR-207ENST00000539925 WDR43Q15061 677 aaKnown RBP eCLIP22.94■■□□□ 1.26
LTBR-207ENST00000539925 HDGFL2Q7Z4V5 671 aaPredicted RBP22.94■■□□□ 1.26
LTBR-207ENST00000539925 ADAMTSL3P82987 1691 aa22.94■■□□□ 1.26
LTBR-207ENST00000539925 BLMP54132 1417 aaPredicted RBP22.94■■□□□ 1.26
LTBR-207ENST00000539925 MORC1Q86VD1 984 aa22.93■■□□□ 1.26
LTBR-207ENST00000539925 PDE3BQ13370 1112 aa22.93■■□□□ 1.26
LTBR-207ENST00000539925 SENP3Q9H4L4 574 aaPredicted RBP22.93■■□□□ 1.26
LTBR-207ENST00000539925 SMG6Q86US8 1419 aaKnown RBP22.92■■□□□ 1.26
LTBR-207ENST00000539925 CEP170BQ9Y4F5 1589 aaPredicted RBP22.92■■□□□ 1.26
LTBR-207ENST00000539925 ATP7BP35670 1465 aa22.91■■□□□ 1.26
LTBR-207ENST00000539925 RIMS1Q86UR5 1692 aaKnown RBP22.91■■□□□ 1.26
LTBR-207ENST00000539925 WASLO00401 505 aaPredicted RBP22.9■■□□□ 1.26
LTBR-207ENST00000539925 POLR3AO14802 1390 aaPredicted RBP22.9■■□□□ 1.26
LTBR-207ENST00000539925 WAPLQ7Z5K2 1190 aa22.9■■□□□ 1.26
LTBR-207ENST00000539925 A0A1W2PP64 1363 aa22.9■■□□□ 1.26
LTBR-207ENST00000539925 PIK3R4Q99570 1358 aa22.89■■□□□ 1.25
LTBR-207ENST00000539925 PLEKHH1Q9ULM0 1364 aa22.88■■□□□ 1.25
LTBR-207ENST00000539925 NGEFQ8N5V2 710 aa22.87■■□□□ 1.25
LTBR-207ENST00000539925 SETD1BQ9UPS6 1966 aaKnown RBP22.87■■□□□ 1.25
LTBR-207ENST00000539925 NUDCQ9Y266 331 aa22.87■■□□□ 1.25
LTBR-207ENST00000539925 SUPT16HQ9Y5B9 1047 aaKnown RBP22.87■■□□□ 1.25
LTBR-207ENST00000539925 ZNF142P52746 1687 aaPredicted RBP22.86■■□□□ 1.25
LTBR-207ENST00000539925 PTCH1Q13635 1447 aa22.86■■□□□ 1.25
LTBR-207ENST00000539925 ADGRB2O60241 1585 aa22.86■■□□□ 1.25
LTBR-207ENST00000539925 ERICH6BQ5W0A0 696 aa22.84■■□□□ 1.25
LTBR-207ENST00000539925 CFAP53Q96M91 514 aa22.84■■□□□ 1.25
LTBR-207ENST00000539925 CD163L1Q9NR16 1453 aa22.84■■□□□ 1.25
LTBR-207ENST00000539925 PLPPR3Q6T4P5 718 aa22.83■■□□□ 1.24
LTBR-207ENST00000539925 ROBO2Q9HCK4 1378 aa22.83■■□□□ 1.24
LTBR-207ENST00000539925 CABP1Q9NZU7 370 aa22.82■■□□□ 1.24
LTBR-207ENST00000539925 ADAMTS8Q9UP79 889 aa22.82■■□□□ 1.24
LTBR-207ENST00000539925 ANKLE2Q86XL3 938 aa22.81■■□□□ 1.24
LTBR-207ENST00000539925 CCDC61Q9Y6R9 512 aa22.81■■□□□ 1.24
LTBR-207ENST00000539925 FKBP8Q14318 412 aa22.79■■□□□ 1.24
LTBR-207ENST00000539925 SLC26A8Q96RN1 970 aa22.79■■□□□ 1.24
LTBR-207ENST00000539925 ZNF692Q9BU19 519 aaPredicted RBP22.79■■□□□ 1.24
LTBR-207ENST00000539925 NUDT16Q96DE0 195 aaKnown RBP22.78■■□□□ 1.24
LTBR-207ENST00000539925 AMOTL2Q9Y2J4 779 aa22.78■■□□□ 1.24
LTBR-207ENST00000539925 CPSF1Q10570 1443 aaKnown RBP22.78■■□□□ 1.24
LTBR-207ENST00000539925 EDC4Q6P2E9 1401 aaKnown RBP22.77■■□□□ 1.24
LTBR-207ENST00000539925 PPIP5K1Q6PFW1 1433 aa22.77■■□□□ 1.24
LTBR-207ENST00000539925 PELP1Q8IZL8 1130 aaKnown RBP22.77■■□□□ 1.24
LTBR-207ENST00000539925 ANKRD26Q9UPS8 1709 aa22.77■■□□□ 1.24
LTBR-207ENST00000539925 PTPRUQ92729 1446 aa22.77■■□□□ 1.24
LTBR-207ENST00000539925 FYB1O15117 783 aa22.75■■□□□ 1.23
LTBR-207ENST00000539925 CDC42BPGQ6DT37 1551 aa22.74■■□□□ 1.23
LTBR-207ENST00000539925 MTHFSP49914 203 aa22.73■■□□□ 1.23
LTBR-207ENST00000539925 XRN1Q8IZH2 1706 aaKnown RBP22.72■■□□□ 1.23
LTBR-207ENST00000539925 KIF20BQ96Q89 1820 aa22.7■■□□□ 1.22
LTBR-207ENST00000539925 PLEKHG3A1L390 1219 aa22.7■■□□□ 1.22
LTBR-207ENST00000539925 NCBP3Q53F19 620 aaKnown RBP22.7■■□□□ 1.22
LTBR-207ENST00000539925 GGNBP2Q9H3C7 697 aa22.7■■□□□ 1.22
LTBR-207ENST00000539925 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.7■■□□□ 1.22
LTBR-207ENST00000539925 TNNT2P45379 298 aaPredicted RBP22.69■■□□□ 1.22
LTBR-207ENST00000539925 RNF123Q5XPI4 1314 aa22.68■■□□□ 1.22
LTBR-207ENST00000539925 ANKARQ7Z5J8 1434 aa22.66■■□□□ 1.22
LTBR-207ENST00000539925 MON2Q7Z3U7 1717 aa22.66■■□□□ 1.22
LTBR-207ENST00000539925 PRR36Q9H6K5 1346 aa22.65■■□□□ 1.22
LTBR-207ENST00000539925 ITSN1Q15811 1721 aa22.65■■□□□ 1.22
LTBR-207ENST00000539925 TOPAZ1Q8N9V7 1692 aa22.64■■□□□ 1.22
LTBR-207ENST00000539925 AKAP12Q02952 1782 aa22.64■■□□□ 1.22
LTBR-207ENST00000539925 RUNDC1Q96C34 613 aa22.64■■□□□ 1.21
LTBR-207ENST00000539925 AATKQ6ZMQ8 1374 aa22.64■■□□□ 1.21
LTBR-207ENST00000539925 ZNF521Q96K83 1311 aa22.63■■□□□ 1.21
LTBR-207ENST00000539925 SHPRHQ149N8 1683 aa22.63■■□□□ 1.21
LTBR-207ENST00000539925 PNNQ9H307 717 aaKnown RBP22.63■■□□□ 1.21
LTBR-207ENST00000539925 NPHP4O75161 1426 aaPredicted RBP22.63■■□□□ 1.21
LTBR-207ENST00000539925 GOLGA2Q08379 1002 aa22.62■■□□□ 1.21
LTBR-207ENST00000539925 PNPLA6Q8IY17 1366 aa22.62■■□□□ 1.21
LTBR-207ENST00000539925 SALL2Q9Y467 1007 aaPredicted RBP22.62■■□□□ 1.21
LTBR-207ENST00000539925 KCNA6P17658 529 aa22.61■■□□□ 1.21
LTBR-207ENST00000539925 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.61■■□□□ 1.21
LTBR-207ENST00000539925 COG3Q96JB2 828 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms