RNA–Protein interactions for RNA: ENST00000539813.1

LINC00273-201, long intergenic non-protein coding RNA 273, humanhuman

BASIC

Gene LINC00273, Length 1,452 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00273-201ENST00000539813 POGKQ9P215 609 aa36.79■■■■□ 3.48
LINC00273-201ENST00000539813 CDC42BPGQ6DT37 1551 aa36.76■■■■□ 3.47
LINC00273-201ENST00000539813 ADGRB2O60241 1585 aa36.75■■■■□ 3.47
LINC00273-201ENST00000539813 EIF3AQ14152 1382 aaKnown RBP36.74■■■■□ 3.47
LINC00273-201ENST00000539813 QRICH2Q9H0J4 1663 aa36.74■■■■□ 3.47
LINC00273-201ENST00000539813 SAFB2Q14151 953 aaKnown RBP eCLIP36.72■■■■□ 3.47
LINC00273-201ENST00000539813 CENPJQ9HC77 1338 aaPredicted RBP36.7■■■■□ 3.47
LINC00273-201ENST00000539813 TOM1O60784 492 aa36.69■■■■□ 3.46
LINC00273-201ENST00000539813 CADPS2Q86UW7 1296 aa36.69■■■■□ 3.46
LINC00273-201ENST00000539813 UBAP1LF5GYI3 381 aa36.69■■■■□ 3.46
LINC00273-201ENST00000539813 ATF3P18847 181 aa36.69■■■■□ 3.46
LINC00273-201ENST00000539813 FMN2Q9NZ56 1722 aa36.67■■■■□ 3.46
LINC00273-201ENST00000539813 MINK1Q8N4C8 1332 aaPredicted RBP36.63■■■■□ 3.45
LINC00273-201ENST00000539813 MST1RQ04912 1400 aa36.62■■■■□ 3.45
LINC00273-201ENST00000539813 USP47Q96K76 1375 aa36.61■■■■□ 3.45
LINC00273-201ENST00000539813 HIRIP3Q9BW71 556 aaPredicted RBP36.58■■■■□ 3.45
LINC00273-201ENST00000539813 SBNO2Q9Y2G9 1366 aa36.57■■■■□ 3.45
LINC00273-201ENST00000539813 FBXO41Q8TF61 875 aa36.57■■■■□ 3.45
LINC00273-201ENST00000539813 SLAIN2Q9P270 581 aa36.57■■■■□ 3.45
LINC00273-201ENST00000539813 C1orf167Q5SNV9 1468 aa36.54■■■■□ 3.44
LINC00273-201ENST00000539813 ROBO1Q9Y6N7 1651 aa36.54■■■■□ 3.44
LINC00273-201ENST00000539813 RGPD8O14715 1765 aaPredicted RBP36.53■■■■□ 3.44
LINC00273-201ENST00000539813 WASLO00401 505 aaPredicted RBP36.52■■■■□ 3.44
LINC00273-201ENST00000539813 TULP4Q9NRJ4 1543 aa36.51■■■■□ 3.44
LINC00273-201ENST00000539813 USP32Q8NFA0 1604 aa36.51■■■■□ 3.44
LINC00273-201ENST00000539813 ST20-MTHFSA0A0A6YYL1 179 aa36.5■■■■□ 3.43
LINC00273-201ENST00000539813 PIP4K2BP78356 416 aa36.5■■■■□ 3.43
LINC00273-201ENST00000539813 ANKARQ7Z5J8 1434 aa36.48■■■■□ 3.43
LINC00273-201ENST00000539813 SCAF1Q9H7N4 1312 aaKnown RBP36.45■■■■□ 3.43
LINC00273-201ENST00000539813 ITSN1Q15811 1721 aa36.44■■■■□ 3.42
LINC00273-201ENST00000539813 CDK19Q9BWU1 502 aa36.44■■■■□ 3.42
LINC00273-201ENST00000539813 ZEB1P37275 1124 aaPredicted RBP36.43■■■■□ 3.42
LINC00273-201ENST00000539813 TESK2Q96S53 571 aa36.43■■■■□ 3.42
LINC00273-201ENST00000539813 EVC2Q86UK5 1308 aa36.43■■■■□ 3.42
LINC00273-201ENST00000539813 NUTM2FA1L443 756 aa36.43■■■■□ 3.42
LINC00273-201ENST00000539813 EIF4G2P78344 907 aaKnown RBP eCLIP36.43■■■■□ 3.42
LINC00273-201ENST00000539813 ATP7BP35670 1465 aa36.42■■■■□ 3.42
LINC00273-201ENST00000539813 BRINP3Q76B58 766 aa36.41■■■■□ 3.42
LINC00273-201ENST00000539813 TOPAZ1Q8N9V7 1692 aa36.41■■■■□ 3.42
LINC00273-201ENST00000539813 KIF1AQ12756 1690 aa36.4■■■■□ 3.42
LINC00273-201ENST00000539813 SLC24A1O60721 1099 aa36.39■■■■□ 3.42
LINC00273-201ENST00000539813 PRR36Q9H6K5 1346 aa36.39■■■■□ 3.42
LINC00273-201ENST00000539813 NHSL1Q5SYE7 1610 aa36.38■■■■□ 3.41
LINC00273-201ENST00000539813 ORAI2Q96SN7 254 aa36.37■■■■□ 3.41
LINC00273-201ENST00000539813 HSPA5P11021 654 aaKnown RBP36.36■■■■□ 3.41
LINC00273-201ENST00000539813 SRPK2P78362 688 aaKnown RBP36.36■■■■□ 3.41
LINC00273-201ENST00000539813 ESCO1Q5FWF5 840 aa36.35■■■■□ 3.41
LINC00273-201ENST00000539813 AHDC1Q5TGY3 1603 aaPredicted RBP36.35■■■■□ 3.41
LINC00273-201ENST00000539813 NUDT16Q96DE0 195 aaKnown RBP36.34■■■■□ 3.41
LINC00273-201ENST00000539813 CABP2Q9NPB3 220 aa36.33■■■■□ 3.41
LINC00273-201ENST00000539813 PHLPP1O60346 1717 aa36.31■■■■□ 3.4
LINC00273-201ENST00000539813 TMF1P82094 1093 aa36.28■■■■□ 3.4
LINC00273-201ENST00000539813 PHF8Q9UPP1 1060 aa36.28■■■■□ 3.4
LINC00273-201ENST00000539813 CCDC61Q9Y6R9 512 aa36.28■■■■□ 3.4
LINC00273-201ENST00000539813 ATAD2Q6PL18 1390 aa36.27■■■■□ 3.4
LINC00273-201ENST00000539813 DISP3Q9P2K9 1392 aa36.27■■■■□ 3.4
LINC00273-201ENST00000539813 PUS7Q96PZ0 661 aaKnown RBP36.26■■■■□ 3.4
LINC00273-201ENST00000539813 COL16A1Q07092 1604 aaPredicted RBP36.24■■■■□ 3.39
LINC00273-201ENST00000539813 ILDR1Q86SU0 546 aaPredicted RBP36.24■■■■□ 3.39
LINC00273-201ENST00000539813 PPIP5K1Q6PFW1 1433 aa36.23■■■■□ 3.39
LINC00273-201ENST00000539813 HSPA1LP34931 641 aa36.21■■■■□ 3.39
LINC00273-201ENST00000539813 NPHP3Q7Z494 1330 aa36.21■■■■□ 3.39
LINC00273-201ENST00000539813 PMFBP1Q8TBY8 1022 aa36.2■■■■□ 3.39
LINC00273-201ENST00000539813 PLEKHG3A1L390 1219 aa36.19■■■■□ 3.38
LINC00273-201ENST00000539813 FOXO3O43524 673 aa36.18■■■■□ 3.38
LINC00273-201ENST00000539813 DDX17Q92841 729 aaKnown RBP36.18■■■■□ 3.38
LINC00273-201ENST00000539813 CDCA8Q53HL2 280 aa36.18■■■■□ 3.38
LINC00273-201ENST00000539813 PXDNQ92626 1479 aa36.17■■■■□ 3.38
LINC00273-201ENST00000539813 POLR3AO14802 1390 aaPredicted RBP36.17■■■■□ 3.38
LINC00273-201ENST00000539813 SOS2Q07890 1332 aaPredicted RBP36.15■■■■□ 3.38
LINC00273-201ENST00000539813 AKAP12Q02952 1782 aa36.14■■■■□ 3.38
LINC00273-201ENST00000539813 CABP1Q9NZU7 370 aa36.13■■■■□ 3.37
LINC00273-201ENST00000539813 NGDNQ8NEJ9 315 aaKnown RBP36.12■■■■□ 3.37
LINC00273-201ENST00000539813 TRPM3Q9HCF6 1732 aaPredicted RBP36.11■■■■□ 3.37
LINC00273-201ENST00000539813 NINLQ9Y2I6 1382 aa36.11■■■■□ 3.37
LINC00273-201ENST00000539813 ACEP12821 1306 aa36.11■■■■□ 3.37
LINC00273-201ENST00000539813 MYOM1P52179 1685 aa36.09■■■■□ 3.37
LINC00273-201ENST00000539813 PSME1Q06323 249 aa36.07■■■■□ 3.37
LINC00273-201ENST00000539813 KRT28Q7Z3Y7 464 aa36.07■■■■□ 3.37
LINC00273-201ENST00000539813 XPCQ01831 940 aaPredicted RBP36.06■■■■□ 3.36
LINC00273-201ENST00000539813 SHPRHQ149N8 1683 aa36.05■■■■□ 3.36
LINC00273-201ENST00000539813 MON2Q7Z3U7 1717 aa36.05■■■■□ 3.36
LINC00273-201ENST00000539813 CPSF1Q10570 1443 aaKnown RBP36.04■■■■□ 3.36
LINC00273-201ENST00000539813 CD163L1Q9NR16 1453 aa36.04■■■■□ 3.36
LINC00273-201ENST00000539813 SBNO1A3KN83 1393 aa36.04■■■■□ 3.36
LINC00273-201ENST00000539813 TMC1Q8TDI8 760 aa36.04■■■■□ 3.36
LINC00273-201ENST00000539813 LRRC59Q96AG4 307 aaKnown RBP36.04■■■■□ 3.36
LINC00273-201ENST00000539813 SLC12A5Q9H2X9 1139 aa36.03■■■■□ 3.36
LINC00273-201ENST00000539813 C11orf95C9JLR9 678 aaPredicted RBP36.02■■■■□ 3.36
LINC00273-201ENST00000539813 ALS2Q96Q42 1657 aa36.01■■■■□ 3.36
LINC00273-201ENST00000539813 USP6P35125 1406 aa36■■■■□ 3.35
LINC00273-201ENST00000539813 JCADQ9P266 1359 aa36■■■■□ 3.35
LINC00273-201ENST00000539813 BRD4O60885 1362 aaPredicted RBP35.99■■■■□ 3.35
LINC00273-201ENST00000539813 NRKQ7Z2Y5 1582 aa35.99■■■■□ 3.35
LINC00273-201ENST00000539813 TNS3Q68CZ2 1445 aa35.99■■■■□ 3.35
LINC00273-201ENST00000539813 ZNF692Q9BU19 519 aaPredicted RBP35.99■■■■□ 3.35
LINC00273-201ENST00000539813 SPATA31A3Q5VYP0 1347 aa35.97■■■■□ 3.35
LINC00273-201ENST00000539813 COL22A1Q8NFW1 1626 aaPredicted RBP35.96■■■■□ 3.35
LINC00273-201ENST00000539813 KIF7Q2M1P5 1343 aa35.96■■■■□ 3.35
LINC00273-201ENST00000539813 TERF2IPQ9NYB0 399 aa35.95■■■■□ 3.35
Retrieved 100 of 20,778 RNA–protein pairs in 217.1 ms