RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 ADGRL3Q9HAR2 1447 aa18.16■□□□□ 0.5
TSPAN9-207ENST00000539631 PRAM1Q96QH2 718 aa18.15■□□□□ 0.5
TSPAN9-207ENST00000539631 C19orf44Q9H6X5 657 aa18.15■□□□□ 0.5
TSPAN9-207ENST00000539631 TOM1O60784 492 aa18.14■□□□□ 0.49
TSPAN9-207ENST00000539631 SAFB2Q14151 953 aaKnown RBP eCLIP18.13■□□□□ 0.49
TSPAN9-207ENST00000539631 POGKQ9P215 609 aa18.13■□□□□ 0.49
TSPAN9-207ENST00000539631 GPRASP1Q5JY77 1395 aa18.13■□□□□ 0.49
TSPAN9-207ENST00000539631 ATF3P18847 181 aa18.11■□□□□ 0.49
TSPAN9-207ENST00000539631 DCCP43146 1447 aa18.11■□□□□ 0.49
TSPAN9-207ENST00000539631 CDC42BPGQ6DT37 1551 aa18.1■□□□□ 0.49
TSPAN9-207ENST00000539631 QRICH2Q9H0J4 1663 aa18.09■□□□□ 0.49
TSPAN9-207ENST00000539631 PIP4K2BP78356 416 aa18.09■□□□□ 0.49
TSPAN9-207ENST00000539631 CADPS2Q86UW7 1296 aa18.09■□□□□ 0.49
TSPAN9-207ENST00000539631 CARD11Q9BXL7 1154 aa18.09■□□□□ 0.49
TSPAN9-207ENST00000539631 FMN2Q9NZ56 1722 aa18.09■□□□□ 0.49
TSPAN9-207ENST00000539631 SCAF1Q9H7N4 1312 aaKnown RBP18.08■□□□□ 0.49
TSPAN9-207ENST00000539631 ADGRB2O60241 1585 aa18.08■□□□□ 0.48
TSPAN9-207ENST00000539631 MINK1Q8N4C8 1332 aaPredicted RBP18.07■□□□□ 0.48
TSPAN9-207ENST00000539631 MST1RQ04912 1400 aa18.06■□□□□ 0.48
TSPAN9-207ENST00000539631 ROBO1Q9Y6N7 1651 aa18.06■□□□□ 0.48
TSPAN9-207ENST00000539631 SLAIN2Q9P270 581 aa18.06■□□□□ 0.48
TSPAN9-207ENST00000539631 RGPD8O14715 1765 aaPredicted RBP18.06■□□□□ 0.48
TSPAN9-207ENST00000539631 CENPJQ9HC77 1338 aaPredicted RBP18.05■□□□□ 0.48
TSPAN9-207ENST00000539631 HIRIP3Q9BW71 556 aaPredicted RBP18.05■□□□□ 0.48
TSPAN9-207ENST00000539631 EIF3AQ14152 1382 aaKnown RBP18.03■□□□□ 0.48
TSPAN9-207ENST00000539631 C1orf167Q5SNV9 1468 aa18.02■□□□□ 0.48
TSPAN9-207ENST00000539631 NUTM2FA1L443 756 aa18.02■□□□□ 0.48
TSPAN9-207ENST00000539631 USP32Q8NFA0 1604 aa18.01■□□□□ 0.47
TSPAN9-207ENST00000539631 WASLO00401 505 aaPredicted RBP17.99■□□□□ 0.47
TSPAN9-207ENST00000539631 BRINP3Q76B58 766 aa17.98■□□□□ 0.47
TSPAN9-207ENST00000539631 TULP4Q9NRJ4 1543 aa17.98■□□□□ 0.47
TSPAN9-207ENST00000539631 USP47Q96K76 1375 aa17.97■□□□□ 0.47
TSPAN9-207ENST00000539631 ORAI2Q96SN7 254 aa17.97■□□□□ 0.47
TSPAN9-207ENST00000539631 PHLPP1O60346 1717 aa17.96■□□□□ 0.47
TSPAN9-207ENST00000539631 CDK19Q9BWU1 502 aa17.96■□□□□ 0.47
TSPAN9-207ENST00000539631 NHSL1Q5SYE7 1610 aa17.96■□□□□ 0.47
TSPAN9-207ENST00000539631 ST20-MTHFSA0A0A6YYL1 179 aa17.95■□□□□ 0.46
TSPAN9-207ENST00000539631 ESCO1Q5FWF5 840 aa17.95■□□□□ 0.46
TSPAN9-207ENST00000539631 ANKARQ7Z5J8 1434 aa17.95■□□□□ 0.46
TSPAN9-207ENST00000539631 PRR36Q9H6K5 1346 aa17.95■□□□□ 0.46
TSPAN9-207ENST00000539631 ITSN1Q15811 1721 aa17.95■□□□□ 0.46
TSPAN9-207ENST00000539631 HSPA1LP34931 641 aa17.94■□□□□ 0.46
TSPAN9-207ENST00000539631 AHDC1Q5TGY3 1603 aaPredicted RBP17.94■□□□□ 0.46
TSPAN9-207ENST00000539631 KIF1AQ12756 1690 aa17.93■□□□□ 0.46
TSPAN9-207ENST00000539631 SBNO2Q9Y2G9 1366 aa17.93■□□□□ 0.46
TSPAN9-207ENST00000539631 ATP7BP35670 1465 aa17.93■□□□□ 0.46
TSPAN9-207ENST00000539631 TOPAZ1Q8N9V7 1692 aa17.93■□□□□ 0.46
TSPAN9-207ENST00000539631 EVC2Q86UK5 1308 aa17.92■□□□□ 0.46
TSPAN9-207ENST00000539631 SRPK2P78362 688 aaKnown RBP17.91■□□□□ 0.46
TSPAN9-207ENST00000539631 DDX17Q92841 729 aaKnown RBP17.91■□□□□ 0.46
TSPAN9-207ENST00000539631 NUDT16Q96DE0 195 aaKnown RBP17.91■□□□□ 0.46
TSPAN9-207ENST00000539631 TESK2Q96S53 571 aa17.91■□□□□ 0.46
TSPAN9-207ENST00000539631 CABP2Q9NPB3 220 aa17.91■□□□□ 0.46
TSPAN9-207ENST00000539631 COL16A1Q07092 1604 aaPredicted RBP17.9■□□□□ 0.46
TSPAN9-207ENST00000539631 PHF8Q9UPP1 1060 aa17.89■□□□□ 0.45
TSPAN9-207ENST00000539631 EIF4G2P78344 907 aaKnown RBP eCLIP17.88■□□□□ 0.45
TSPAN9-207ENST00000539631 PMFBP1Q8TBY8 1022 aa17.88■□□□□ 0.45
TSPAN9-207ENST00000539631 HSPA5P11021 654 aaKnown RBP17.87■□□□□ 0.45
TSPAN9-207ENST00000539631 FOXO3O43524 673 aa17.86■□□□□ 0.45
TSPAN9-207ENST00000539631 CCDC61Q9Y6R9 512 aa17.85■□□□□ 0.45
TSPAN9-207ENST00000539631 PXDNQ92626 1479 aa17.84■□□□□ 0.45
TSPAN9-207ENST00000539631 PPIP5K1Q6PFW1 1433 aa17.84■□□□□ 0.45
TSPAN9-207ENST00000539631 NPHP3Q7Z494 1330 aa17.84■□□□□ 0.45
TSPAN9-207ENST00000539631 XPCQ01831 940 aaPredicted RBP17.84■□□□□ 0.45
TSPAN9-207ENST00000539631 SOS2Q07890 1332 aaPredicted RBP17.83■□□□□ 0.44
TSPAN9-207ENST00000539631 TMF1P82094 1093 aa17.83■□□□□ 0.44
TSPAN9-207ENST00000539631 SLC24A1O60721 1099 aa17.82■□□□□ 0.44
TSPAN9-207ENST00000539631 TRPM3Q9HCF6 1732 aaPredicted RBP17.81■□□□□ 0.44
TSPAN9-207ENST00000539631 ATAD2Q6PL18 1390 aa17.81■□□□□ 0.44
TSPAN9-207ENST00000539631 PLEKHG3A1L390 1219 aa17.81■□□□□ 0.44
TSPAN9-207ENST00000539631 KRT28Q7Z3Y7 464 aa17.81■□□□□ 0.44
TSPAN9-207ENST00000539631 NGDNQ8NEJ9 315 aaKnown RBP17.81■□□□□ 0.44
TSPAN9-207ENST00000539631 CABP1Q9NZU7 370 aa17.81■□□□□ 0.44
TSPAN9-207ENST00000539631 AKAP12Q02952 1782 aa17.81■□□□□ 0.44
TSPAN9-207ENST00000539631 SHPRHQ149N8 1683 aa17.8■□□□□ 0.44
TSPAN9-207ENST00000539631 ACEP12821 1306 aa17.8■□□□□ 0.44
TSPAN9-207ENST00000539631 PSME1Q06323 249 aa17.8■□□□□ 0.44
TSPAN9-207ENST00000539631 POLR3AO14802 1390 aaPredicted RBP17.79■□□□□ 0.44
TSPAN9-207ENST00000539631 MED1Q15648 1581 aaPredicted RBP17.79■□□□□ 0.44
TSPAN9-207ENST00000539631 LRRC59Q96AG4 307 aaKnown RBP17.79■□□□□ 0.44
TSPAN9-207ENST00000539631 PUS7Q96PZ0 661 aaKnown RBP17.79■□□□□ 0.44
TSPAN9-207ENST00000539631 ZEB1P37275 1124 aaPredicted RBP17.78■□□□□ 0.44
TSPAN9-207ENST00000539631 JCADQ9P266 1359 aa17.78■□□□□ 0.44
TSPAN9-207ENST00000539631 TMC1Q8TDI8 760 aa17.76■□□□□ 0.43
TSPAN9-207ENST00000539631 ALS2Q96Q42 1657 aa17.76■□□□□ 0.43
TSPAN9-207ENST00000539631 MYOM1P52179 1685 aa17.75■□□□□ 0.43
TSPAN9-207ENST00000539631 PHF23Q9BUL5 403 aaPredicted RBP17.75■□□□□ 0.43
TSPAN9-207ENST00000539631 SLC12A5Q9H2X9 1139 aa17.75■□□□□ 0.43
TSPAN9-207ENST00000539631 SBNO1A3KN83 1393 aa17.75■□□□□ 0.43
TSPAN9-207ENST00000539631 PNPLA6Q8IY17 1366 aa17.75■□□□□ 0.43
TSPAN9-207ENST00000539631 MON2Q7Z3U7 1717 aa17.75■□□□□ 0.43
TSPAN9-207ENST00000539631 SPATA31A3Q5VYP0 1347 aa17.74■□□□□ 0.43
TSPAN9-207ENST00000539631 COL22A1Q8NFW1 1626 aaPredicted RBP17.74■□□□□ 0.43
TSPAN9-207ENST00000539631 CDCA8Q53HL2 280 aa17.74■□□□□ 0.43
TSPAN9-207ENST00000539631 CD163L1Q9NR16 1453 aa17.74■□□□□ 0.43
TSPAN9-207ENST00000539631 TNS3Q68CZ2 1445 aa17.73■□□□□ 0.43
TSPAN9-207ENST00000539631 C11orf95C9JLR9 678 aaPredicted RBP17.73■□□□□ 0.43
TSPAN9-207ENST00000539631 CPSF1Q10570 1443 aaKnown RBP17.72■□□□□ 0.43
TSPAN9-207ENST00000539631 NRKQ7Z2Y5 1582 aa17.72■□□□□ 0.43
TSPAN9-207ENST00000539631 PAK3O75914 559 aaPredicted RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms