RNA–Protein interactions for RNA: ENST00000539469.6

PDZRN4-203, Transcript of PDZ domain containing ring finger 4, humanhuman

TSL 1 (best) BASIC

Gene PDZRN4, Length 3,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4-203ENST00000539469 KCNV2Q8TDN2 545 aa8.48□□□□□ -1.05
PDZRN4-203ENST00000539469 IQGAP1P46940 1657 aa8.48□□□□□ -1.05
PDZRN4-203ENST00000539469 TNRQ92752 1358 aa8.48□□□□□ -1.05
PDZRN4-203ENST00000539469 CDK11BP21127 795 aaKnown RBP8.48□□□□□ -1.05
PDZRN4-203ENST00000539469 POLR1AO95602 1720 aaPredicted RBP8.47□□□□□ -1.05
PDZRN4-203ENST00000539469 ZNF142P52746 1687 aaPredicted RBP8.47□□□□□ -1.05
PDZRN4-203ENST00000539469 HS6ST3Q8IZP7 471 aa8.47□□□□□ -1.05
PDZRN4-203ENST00000539469 HIRIP3Q9BW71 556 aaPredicted RBP8.47□□□□□ -1.05
PDZRN4-203ENST00000539469 SETD1AO15047 1707 aaKnown RBP8.47□□□□□ -1.05
PDZRN4-203ENST00000539469 ADGRF5Q8IZF2 1346 aa8.47□□□□□ -1.05
PDZRN4-203ENST00000539469 FOXD4L5Q5VV16 416 aaPredicted RBP8.47□□□□□ -1.05
PDZRN4-203ENST00000539469 FOXD4L4Q8WXT5 416 aaPredicted RBP8.47□□□□□ -1.05
PDZRN4-203ENST00000539469 SLC52A1Q9NWF4 448 aa8.47□□□□□ -1.05
PDZRN4-203ENST00000539469 CHMP4AQ9BY43 222 aa8.46□□□□□ -1.05
PDZRN4-203ENST00000539469 NRXN3Q9Y4C0 1643 aa8.46□□□□□ -1.05
PDZRN4-203ENST00000539469 PIK3C2GO75747 1445 aa8.46□□□□□ -1.06
PDZRN4-203ENST00000539469 NUTM2DQ5VT03 806 aaPredicted RBP8.46□□□□□ -1.06
PDZRN4-203ENST00000539469 NBPF1Q3BBV0 1214 aa8.45□□□□□ -1.06
PDZRN4-203ENST00000539469 CEP170BQ9Y4F5 1589 aaPredicted RBP8.45□□□□□ -1.06
PDZRN4-203ENST00000539469 AEBP1Q8IUX7 1158 aa8.45□□□□□ -1.06
PDZRN4-203ENST00000539469 RNF25Q96BH1 459 aaPredicted RBP8.45□□□□□ -1.06
PDZRN4-203ENST00000539469 PTPRMP28827 1452 aa8.45□□□□□ -1.06
PDZRN4-203ENST00000539469 NLRP1Q9C000 1473 aa8.45□□□□□ -1.06
PDZRN4-203ENST00000539469 ZFYVE9O95405 1425 aa8.44□□□□□ -1.06
PDZRN4-203ENST00000539469 ASXL1Q8IXJ9 1541 aa8.44□□□□□ -1.06
PDZRN4-203ENST00000539469 RBM25P49756 843 aaKnown RBP8.44□□□□□ -1.06
PDZRN4-203ENST00000539469 MTMR7Q9Y216 660 aa8.44□□□□□ -1.06
PDZRN4-203ENST00000539469 ROCK2O75116 1388 aaKnown RBP8.44□□□□□ -1.06
PDZRN4-203ENST00000539469 GPRASP1Q5JY77 1395 aa8.44□□□□□ -1.06
PDZRN4-203ENST00000539469 ADGRB1O14514 1584 aa8.44□□□□□ -1.06
PDZRN4-203ENST00000539469 HSPA5P11021 654 aaKnown RBP8.43□□□□□ -1.06
PDZRN4-203ENST00000539469 PLCD3Q8N3E9 789 aa8.43□□□□□ -1.06
PDZRN4-203ENST00000539469 SETBP1Q9Y6X0 1596 aa8.43□□□□□ -1.06
PDZRN4-203ENST00000539469 USP47Q96K76 1375 aa8.43□□□□□ -1.06
PDZRN4-203ENST00000539469 RIMS2Q9UQ26 1411 aa8.42□□□□□ -1.06
PDZRN4-203ENST00000539469 ARHGEF28Q8N1W1 1705 aaKnown RBP8.42□□□□□ -1.06
PDZRN4-203ENST00000539469 RPGRIP1LQ68CZ1 1315 aa8.42□□□□□ -1.06
PDZRN4-203ENST00000539469 MKRN3Q13064 507 aaKnown RBP8.42□□□□□ -1.06
PDZRN4-203ENST00000539469 ALKQ9UM73 1620 aa8.41□□□□□ -1.06
PDZRN4-203ENST00000539469 CFAP70Q5T0N1 1121 aa8.41□□□□□ -1.06
PDZRN4-203ENST00000539469 SLIT1O75093 1534 aa8.41□□□□□ -1.06
PDZRN4-203ENST00000539469 CCDC82Q8N4S0 544 aa8.41□□□□□ -1.06
PDZRN4-203ENST00000539469 CARD11Q9BXL7 1154 aa8.41□□□□□ -1.06
PDZRN4-203ENST00000539469 STAG3Q9UJ98 1225 aa8.4□□□□□ -1.06
PDZRN4-203ENST00000539469 ARHGAP23Q9P227 1491 aa8.4□□□□□ -1.06
PDZRN4-203ENST00000539469 EIF4G2P78344 907 aaKnown RBP eCLIP8.4□□□□□ -1.06
PDZRN4-203ENST00000539469 QRICH2Q9H0J4 1663 aa8.4□□□□□ -1.07
PDZRN4-203ENST00000539469 TMEM2Q9UHN6 1383 aa8.4□□□□□ -1.07
PDZRN4-203ENST00000539469 STAC3Q96MF2 364 aa8.39□□□□□ -1.07
PDZRN4-203ENST00000539469 SETD1BQ9UPS6 1966 aaKnown RBP8.39□□□□□ -1.07
PDZRN4-203ENST00000539469 C11orf95C9JLR9 678 aaPredicted RBP8.39□□□□□ -1.07
PDZRN4-203ENST00000539469 KDM4FA0A1W2PPD8 638 aa8.38□□□□□ -1.07
PDZRN4-203ENST00000539469 SCAF11Q99590 1463 aaKnown RBP8.38□□□□□ -1.07
PDZRN4-203ENST00000539469 VGFO15240 615 aaPredicted RBP8.38□□□□□ -1.07
PDZRN4-203ENST00000539469 C14orf93Q9H972 538 aaKnown RBP8.38□□□□□ -1.07
PDZRN4-203ENST00000539469 SAMD1Q6SPF0 538 aaPredicted RBP8.37□□□□□ -1.07
PDZRN4-203ENST00000539469 KNDC1Q76NI1 1749 aa8.37□□□□□ -1.07
PDZRN4-203ENST00000539469 ST20-MTHFSA0A0A6YYL1 179 aa8.37□□□□□ -1.07
PDZRN4-203ENST00000539469 WASHC2AQ641Q2 1341 aa8.37□□□□□ -1.07
PDZRN4-203ENST00000539469 LTKP29376 864 aa8.37□□□□□ -1.07
PDZRN4-203ENST00000539469 TMEM132EQ6IEE7 984 aa8.37□□□□□ -1.07
PDZRN4-203ENST00000539469 RBM19Q9Y4C8 960 aaKnown RBP8.37□□□□□ -1.07
PDZRN4-203ENST00000539469 CACNB1Q02641 598 aaPredicted RBP8.36□□□□□ -1.07
PDZRN4-203ENST00000539469 MYOM1P52179 1685 aa8.36□□□□□ -1.07
PDZRN4-203ENST00000539469 ADAMTS13Q76LX8 1427 aa8.36□□□□□ -1.07
PDZRN4-203ENST00000539469 CCDC7Q96M83 1385 aa8.34□□□□□ -1.07
PDZRN4-203ENST00000539469 DISP3Q9P2K9 1392 aa8.34□□□□□ -1.07
PDZRN4-203ENST00000539469 PLEKHG1Q9ULL1 1385 aa8.34□□□□□ -1.07
PDZRN4-203ENST00000539469 MED14O60244 1454 aa8.34□□□□□ -1.07
PDZRN4-203ENST00000539469 KIF7Q2M1P5 1343 aa8.34□□□□□ -1.07
PDZRN4-203ENST00000539469 TESK2Q96S53 571 aa8.34□□□□□ -1.07
PDZRN4-203ENST00000539469 WDR70Q9NW82 654 aa8.34□□□□□ -1.07
PDZRN4-203ENST00000539469 METP08581 1390 aa8.34□□□□□ -1.07
PDZRN4-203ENST00000539469 YTHDC2Q9H6S0 1430 aaKnown RBP8.34□□□□□ -1.07
PDZRN4-203ENST00000539469 RGS22Q8NE09 1264 aa8.34□□□□□ -1.07
PDZRN4-203ENST00000539469 DIP2AQ14689 1571 aa8.33□□□□□ -1.08
PDZRN4-203ENST00000539469 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.33□□□□□ -1.08
PDZRN4-203ENST00000539469 TRAK1Q9UPV9 953 aa8.33□□□□□ -1.08
PDZRN4-203ENST00000539469 CPS1P31327 1500 aa8.33□□□□□ -1.08
PDZRN4-203ENST00000539469 HSP90B1P14625 803 aaKnown RBP8.32□□□□□ -1.08
PDZRN4-203ENST00000539469 TXNDC2Q86VQ3 553 aa8.32□□□□□ -1.08
PDZRN4-203ENST00000539469 DHX37Q8IY37 1157 aaKnown RBP8.32□□□□□ -1.08
PDZRN4-203ENST00000539469 XRN1Q8IZH2 1706 aaKnown RBP8.32□□□□□ -1.08
PDZRN4-203ENST00000539469 STK25O00506 426 aa8.32□□□□□ -1.08
PDZRN4-203ENST00000539469 SEMA3EO15041 775 aa8.32□□□□□ -1.08
PDZRN4-203ENST00000539469 THEMISQ8N1K5 641 aaPredicted RBP8.32□□□□□ -1.08
PDZRN4-203ENST00000539469 TULP4Q9NRJ4 1543 aa8.32□□□□□ -1.08
PDZRN4-203ENST00000539469 LMTK3Q96Q04 1460 aa8.32□□□□□ -1.08
PDZRN4-203ENST00000539469 DLC1Q96QB1 1528 aa8.32□□□□□ -1.08
PDZRN4-203ENST00000539469 DDX10Q13206 875 aaKnown RBP8.32□□□□□ -1.08
PDZRN4-203ENST00000539469 CHD2O14647 1828 aaKnown RBP8.32□□□□□ -1.08
PDZRN4-203ENST00000539469 PTPRUQ92729 1446 aa8.32□□□□□ -1.08
PDZRN4-203ENST00000539469 STRCQ7RTU9 1775 aa8.31□□□□□ -1.08
PDZRN4-203ENST00000539469 EIF3AQ14152 1382 aaKnown RBP8.31□□□□□ -1.08
PDZRN4-203ENST00000539469 CADPS2Q86UW7 1296 aa8.31□□□□□ -1.08
PDZRN4-203ENST00000539469 STK26Q9P289 416 aa8.31□□□□□ -1.08
PDZRN4-203ENST00000539469 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.3□□□□□ -1.08
PDZRN4-203ENST00000539469 LRPPRCP42704 1394 aaKnown RBP8.3□□□□□ -1.08
PDZRN4-203ENST00000539469 PLEKHH1Q9ULM0 1364 aa8.3□□□□□ -1.08
PDZRN4-203ENST00000539469 IRX6P78412 446 aaPredicted RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms